prot_P-canaliculata_contig9221.23202.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9221.23202.1
Unique Nameprot_P-canaliculata_contig9221.23202.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length356
Homology
BLAST of mRNA_P-canaliculata_contig9221.23202.1 vs. uniprot
Match: D7G5H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H2_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 3.600e-27
Identity = 142/356 (39.89%), Postives = 178/356 (50.00%), Query Frame = 0
Query:   21 ISPSGGSADHRSETSSIVTRVYAPSSCTEDQVAFSRAGTSWVVEDSSHGQQSPLYMGMSQASAASPHGXXXXXXXVAGSR-MSSPPPGTLADMQR-MSERSAVTGLSQVTAAASKLGNMFGSVGGMHPRTSDHSAYAITRGVDTVSGSRPSAVDDSVGMSQDDITASELPARERSPSGFSVAAESETAFSEAASRFD---APGYHPASSAQHR-----------PPTRVGDRLGIDT-SSPNSAAGSRFEWSPSSHATTMSRIAGGSSPSGI---VHGRDQ----GPMTGRSVASSMRSTSSSFFQPSSSKSHRSGDS-GTRVSSAASASSWDEEDLQDMGTRWLSERAYNQQFDA 351
            +SP+G      S+ SS+VTRVYAPSS      A        VV  +  G  +P    ++QA A+  +        +A SR +SSP         R  S  S +TG+S  TAA        GS  G+ P  +      I++    +SG  P+      G   +D          RSP  FSVA  SE  FS+AASR+D   A       S   R           PPTR+ D L I   SSPNSAA SRF+ S  + ATT +   G  SP+       GR +    GP+TGRS ASSMRS   S F  +S  S RSGDS G   + +ASASSWDEEDLQ+MGTRWL++RAYNQQFDA
Sbjct:  414 LSPAG------SQASSVVTRVYAPSSVGGGDQAS-------VVRVACVGADTP---DVAQALASPTNESAMSQVSIAASRFLSSPVNNPFGPQFRGQSASSGLTGVSAGTAA--------GSGSGVVPVGAARKDMGISQ---DLSGLTPTRT----GRGGEDGA--------RSPGAFSVAGRSEAGFSDAASRYDNSFAASRESGVSLAGRVGLTTGAGAGGPPTRL-DGLAIQQPSSPNSAAASRFDTSSPASATTFTSRVGVGSPTAAPVGAGGRARVGAGGPLTGRSAASSMRSDGGSSFFRASGGSQRSGDSRGVGGAGSASASSWDEEDLQNMGTRWLADRAYNQQFDA 729          
BLAST of mRNA_P-canaliculata_contig9221.23202.1 vs. uniprot
Match: A0A6H5KVJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ4_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 8.550e-26
Identity = 137/360 (38.06%), Postives = 171/360 (47.50%), Query Frame = 0
Query:   21 ISPSGGSADHRSETSSIVTRVYAPSSCTEDQVAFSRAGTSWVVEDSSHGQQSPLYMGMSQASAASPHGXXXXXXXVAGSRMSSPPPGTLADMQ--RMSERSAVTGLSQVTAAASKLGNMFGSVGGMHPRTSDHSAYAITRGVDTVSGSRPSAVDDSVGMSQDDITASELPARERSPSGFSVAAESETAFSEAASRFD---APGYHPASSAQHR--------------PPTRVGDRLGID-TSSPNSAAGSRFEWSPSSHATTMSRIAGGSSPSGIVHGRDQ-------GPMTGRSVASSMRSTSSSFFQPSSSKSHRSGDS-GTRVSSAASASSWDEEDLQDMGTRWLSERAYNQQFDAH 352
            +SP+G      S+ SS+VTRVYAPSS      A                 +SP    M+Q  A+  +        +A SR  S P       Q    S  S +TG+S  TAA        GS  G+ P  +      I++    +SG  P  +    G+  +D          RSP  FSVA  SE  FS+AASR+D   A       S   R              PPT + D L I   SSPNSAA SRF+ S  + ATT +   G  SP+    G          GP+TGRS ASSMRS   S F  +S  S RSGDS G   + +ASASSWD+EDLQ+MGTRWL++RAYNQQFDAH
Sbjct:  169 LSPAG------SQASSVVTRVYAPSSVGGGDQA-----------------RSP---NMAQTFASPTNESAMSQVSIAASRFLSSPVDNRFGPQFHGQSASSGLTGVSAGTAA--------GSGSGVVPVGAARKDMGISQ---DLSGMTPPRM----GLGGEDGA--------RSPGAFSVAGRSEAGFSDAASRYDNSFAASRESGVSLAGRVGLTAGTAGXXXXXPPTCL-DALAIQHPSSPNSAAASRFDTSSPASATTFTSRVGLGSPTAAPAGAGGRARVGAGGPLTGRSAASSMRSDGGSSFFRASGGSQRSGDSRGMGGTGSASASSWDDEDLQNMGTRWLADRAYNQQFDAH 478          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9221.23202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5H2_ECTSI3.600e-2739.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVJ4_9PHAE8.550e-2638.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9221contigP-canaliculata_contig9221:8275..9909 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9221.23202.1mRNA_P-canaliculata_contig9221.23202.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9221 7982..10736 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9221.23202.1 ID=prot_P-canaliculata_contig9221.23202.1|Name=mRNA_P-canaliculata_contig9221.23202.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=356bp
MPASGGSEEGEDSLPSNGVHISPSGGSADHRSETSSIVTRVYAPSSCTED
QVAFSRAGTSWVVEDSSHGQQSPLYMGMSQASAASPHGVGMSQASVAGSR
MSSPPPGTLADMQRMSERSAVTGLSQVTAAASKLGNMFGSVGGMHPRTSD
HSAYAITRGVDTVSGSRPSAVDDSVGMSQDDITASELPARERSPSGFSVA
AESETAFSEAASRFDAPGYHPASSAQHRPPTRVGDRLGIDTSSPNSAAGS
RFEWSPSSHATTMSRIAGGSSPSGIVHGRDQGPMTGRSVASSMRSTSSSF
FQPSSSKSHRSGDSGTRVSSAASASSWDEEDLQDMGTRWLSERAYNQQFD
AHSHK*
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