prot_P-canaliculata_contig91890.23168.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig91890.23168.1
Unique Nameprot_P-canaliculata_contig91890.23168.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length74
Homology
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BLAST of mRNA_P-canaliculata_contig91890.23168.1 vs. uniprot
Match: A0A7K4D007_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A7K4D007_9ARCH)

HSP 1 Score: 58.2 bits (139), Expect = 1.370e-9
Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 0 
Query:    5 RLSHDPIEDDPNYSERIQTVRDAVEKELKE-EMLPFGSCHEVWSRMKSRLAEE-GIIWRSPQEMNSKIRFD 73
            +L HDPIEDDP +++R+       EK +K+ +    G CH  W+  K  L E+ GI W+ P E+N  +RFD
Sbjct:    4 KLKHDPIEDDPAFTDRLAKADKDAEKTVKQVKKGQRGYCHAFWAAKKRILREKHGIDWKDPAELNPGVRFD 74
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BLAST of mRNA_P-canaliculata_contig91890.23168.1 vs. uniprot
Match: UPI001EDB0F74 (hypothetical protein n=1 Tax=Prevotella sp. E9-3 TaxID=2913621 RepID=UPI001EDB0F74)

HSP 1 Score: 56.6 bits (135), Expect = 6.090e-8
Identity = 27/73 (36.99%), Postives = 38/73 (52.05%), Query Frame = 0 
Query:    2 KNHR-LSHDPIEDDPNYSERIQTVRDAVEKELKEEMLPFGSCHEVWSRMKSRLAEEGIIWRSPQEMNSKIRFD 73
            ++HR L+ DPIE  P + E    +    +  L  E    G C   WS ++  LAE GI W SP E+N ++ FD
Sbjct:  130 RHHRHLNFDPIERTPEWEENFYEIEKECDHRLGNEPRGMGFCFSYWSTLRQVLAEHGIEWHSPSELNPRVMFD 202
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig91890.23168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7K4D007_9ARCH1.370e-940.85Uncharacterized protein n=1 Tax=Candidatus Lokiarc... [more]
UPI001EDB0F746.090e-836.99hypothetical protein n=1 Tax=Prevotella sp. E9-3 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig91890contigP-canaliculata_contig91890:801..1076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig91890.23168.1mRNA_P-canaliculata_contig91890.23168.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig91890 801..1076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig91890.23168.1 ID=prot_P-canaliculata_contig91890.23168.1|Name=mRNA_P-canaliculata_contig91890.23168.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=74bp
MKNHRLSHDPIEDDPNYSERIQTVRDAVEKELKEEMLPFGSCHEVWSRMK
SRLAEEGIIWRSPQEMNSKIRFD*
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