mRNA_P-canaliculata_contig10132.221.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig10132.221.1
Unique NamemRNA_P-canaliculata_contig10132.221.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
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BLAST of mRNA_P-canaliculata_contig10132.221.1 vs. uniprot
Match: D8LRL3_ECTSI (Sulfate adenylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL3_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 2.360e-119
Identity = 171/186 (91.94%), Postives = 180/186 (96.77%), Query Frame = 1 
Query:    1 QLFMRALDAENVGSDGVVMVHPTCGPTQADDIPGDVRYRTYEVLKDETANPRVKWAYLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKSCVTGDDFYGAYDAQEFAAANSEELGVQVVPSLNLVFTEEEGYVTADVAEEKGLTKKSLSGTKFRKMLRGGEDIPEWFAFKSVVEVLREAN 558
            +LF RALDAENVG DGVVMVHPTCGPTQADDIPGDVRYRTYEVLK+ETANPRV+WAYLPYSMHMAGPREA+QHMMIRKNFGCTHFIIGRDMAGSKS VTGDDFYGAY+AQEFAAANSEELGV+ VPSLNLV+TEEEGYVTADVAEEK LTKKSLSGTKFR+MLRGGEDIPEWFAFKSVV+VLR AN
Sbjct:  264 ELFTRALDAENVGGDGVVMVHPTCGPTQADDIPGDVRYRTYEVLKEETANPRVRWAYLPYSMHMAGPREAMQHMMIRKNFGCTHFIIGRDMAGSKSSVTGDDFYGAYEAQEFAAANSEELGVKCVPSLNLVYTEEEGYVTADVAEEKSLTKKSLSGTKFRQMLRGGEDIPEWFAFKSVVDVLRSAN 449
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BLAST of mRNA_P-canaliculata_contig10132.221.1 vs. uniprot
Match: A0A7S1H1K0_9STRA (Sulfate adenylyltransferase n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H1K0_9STRA)

HSP 1 Score: 322 bits (824), Expect = 1.020e-108
Identity = 155/184 (84.24%), Postives = 170/184 (92.39%), Query Frame = 1 
Query:    1 QLFMRALDAENVGSDGVVMVHPTCGPTQADDIPGDVRYRTYEVLKDETANPRVKWAYLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKSCVTGDDFYGAYDAQEFAAANSEELGVQVVPSLNLVFTEEEGYVTADVAEEKGLTKKSLSGTKFRKMLRGGEDIPEWFAFKSVVEVLRE 552
            +LF RALD ENVG  GVV+VHPTCGPTQADDIPG+VRY+TYEVLK+ETA+PRVKW YLPYSMHMAGPREAIQHM+IRKNFGCTHFIIGRDMAGSKS +TGDDFYGAYDAQ+ A AN+E+LGV  VPSLNLV+ EEEGYVTAD AEEKGL+ K LSGTKFR+MLRGGEDIPEWFAFKSVV+VLRE
Sbjct:  115 ELFTRALDDENVGEGGVVLVHPTCGPTQADDIPGNVRYKTYEVLKEETADPRVKWDYLPYSMHMAGPREAIQHMIIRKNFGCTHFIIGRDMAGSKSSITGDDFYGAYDAQDTAKANAEKLGVTPVPSLNLVYCEEEGYVTADFAEEKGLSIKKLSGTKFRQMLRGGEDIPEWFAFKSVVKVLRE 298
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BLAST of mRNA_P-canaliculata_contig10132.221.1 vs. uniprot
Match: A0A5B8N1Q9_9CHLO (Sulfate adenylyltransferase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8N1Q9_9CHLO)

HSP 1 Score: 320 bits (820), Expect = 8.090e-106
Identity = 152/186 (81.72%), Postives = 170/186 (91.40%), Query Frame = 1 
Query:    1 QLFMRALDAENVGSDGVVMVHPTCGPTQADDIPGDVRYRTYEVLKDETANPRVKWAYLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKSCVTGDDFYGAYDAQEFAAANSEELGVQVVPSLNLVFTEEEGYVTADVAEEKGLTKKSLSGTKFRKMLRGGEDIPEWFAFKSVVEVLREAN 558
            +LF RALDA+NVG DGVV+VHPTCGPTQ DDIPG VRYRTYEVLK+ETA+P+V WAYLPYSMHMAGPREAIQHM+IRKN+GCTHFIIGRDMAGSKSC+ G+DFYGAYDAQ+ A   SEELGV+ VPSLN+V+TEEEGYVTADVA +KGL+ K LSGTKFR+MLR GEDIPEWFAFKSVV+VLRE N
Sbjct:  280 ELFTRALDADNVGGDGVVLVHPTCGPTQDDDIPGVVRYRTYEVLKEETADPKVNWAYLPYSMHMAGPREAIQHMIIRKNYGCTHFIIGRDMAGSKSCLDGEDFYGAYDAQDLAKEMSEELGVKTVPSLNIVYTEEEGYVTADVASDKGLSIKKLSGTKFRQMLRAGEDIPEWFAFKSVVKVLRENN 465
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BLAST of mRNA_P-canaliculata_contig10132.221.1 vs. uniprot
Match: A0A7S1U390_9STRA (Sulfate adenylyltransferase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U390_9STRA)

HSP 1 Score: 318 bits (815), Expect = 1.360e-105
Identity = 151/184 (82.07%), Postives = 166/184 (90.22%), Query Frame = 1 
Query:    1 QLFMRALDAENVGSDGVVMVHPTCGPTQADDIPGDVRYRTYEVLKDETANPRVKWAYLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKSCVTGDDFYGAYDAQEFAAANSEELGVQVVPSLNLVFTEEEGYVTADVAEEKGLTKKSLSGTKFRKMLRGGEDIPEWFAFKSVVEVLRE 552
            +LF RALDA  VG D +V+VHPTCGPTQADDIPGDVRY+TYEVLK+ETANPR++WAYLPYSMHMAGPREAI HMMIRKNFGCTHFIIGRDMAGSKS VTGDDFYGAYDAQ+FA  N  ++ +  VPSLNLV+TEEE YVTAD AEEKGLT K LSGTKFR+MLRGGEDIPEWFAFKSVV+VLR+
Sbjct:  240 ELFTRALDAPEVGKDAIVLVHPTCGPTQADDIPGDVRYQTYEVLKEETANPRIRWAYLPYSMHMAGPREAIHHMMIRKNFGCTHFIIGRDMAGSKSSVTGDDFYGAYDAQDFANENGPKINMTPVPSLNLVYTEEEDYVTADYAEEKGLTTKKLSGTKFRQMLRGGEDIPEWFAFKSVVKVLRD 423
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BLAST of mRNA_P-canaliculata_contig10132.221.1 vs. uniprot
Match: A0A7S0G9K1_9STRA (Sulfate adenylyltransferase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G9K1_9STRA)

HSP 1 Score: 317 bits (811), Expect = 6.410e-105
Identity = 149/183 (81.42%), Postives = 167/183 (91.26%), Query Frame = 1 
Query:    1 QLFMRALDAENVGSDGVVMVHPTCGPTQADDIPGDVRYRTYEVLKDETANPRVKWAYLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKSCVTGDDFYGAYDAQEFAAANSEELGVQVVPSLNLVFTEEEGYVTADVAEEKGLTKKSLSGTKFRKMLRGGEDIPEWFAFKSVVEVLR 549
            +LF RALDAENVG  G+V+VHPTCGPTQADDIPGDVRY+TYEVLK+ETANPR +WAYLPYSMHMAGPREAIQHMM+RKN+GCTHFIIGRDMAGSKS VTG+DFYGAYDAQ+FA  N+  LG+Q VPSLNLV+TEE+GYVTAD A+ + L+   LSGTKFRKMLRGGEDIPEWFAFKSVV+VLR
Sbjct:  245 ELFTRALDAENVGKTGIVLVHPTCGPTQADDIPGDVRYKTYEVLKEETANPRTRWAYLPYSMHMAGPREAIQHMMVRKNYGCTHFIIGRDMAGSKSSVTGEDFYGAYDAQDFARENAPRLGMQTVPSLNLVYTEEKGYVTADEADAEKLSPLKLSGTKFRKMLRGGEDIPEWFAFKSVVDVLR 427
[Close]
BLAST of mRNA_P-canaliculata_contig10132.221.1 vs. uniprot
Match: A0A7S2GMQ8_9STRA (Sulfate adenylyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GMQ8_9STRA)

HSP 1 Score: 316 bits (810), Expect = 6.460e-105
Identity = 153/184 (83.15%), Postives = 166/184 (90.22%), Query Frame = 1 
Query:    1 QLFMRALDAENVGSDGVVMVHPTCGPTQADDIPGDVRYRTYEVLKDETANPRVKWAYLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKSCVTGDDFYGAYDAQEFAAANSEELGVQVVPSLNLVFTEEEGYVTADVAEEKGLTKKSLSGTKFRKMLRGGEDIPEWFAFKSVVEVLRE 552
            +LF RALDAENVG  GVVMVHPTCGPTQADDI G VRY+TYEVLK+ETANP++ W YLPYSMHMAGPREAI HMMIRKN+GCTHFIIGRDMAGSKS + G+DFYGAY+AQEFA + S ELGV  VPSLNLV+TEEEGYVTADVAEEK L+ K LSGTKFRKMLRGGEDIPEWFAFKSVV+VLRE
Sbjct:  234 ELFTRALDAENVGEGGVVMVHPTCGPTQADDIDGTVRYKTYEVLKEETANPKIFWNYLPYSMHMAGPREAIHHMMIRKNYGCTHFIIGRDMAGSKSSLDGEDFYGAYEAQEFAESKSAELGVVCVPSLNLVYTEEEGYVTADVAEEKSLSMKKLSGTKFRKMLRGGEDIPEWFAFKSVVKVLRE 417
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BLAST of mRNA_P-canaliculata_contig10132.221.1 vs. uniprot
Match: A0A7S2A4Q0_TRICV (Sulfate adenylyltransferase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A4Q0_TRICV)

HSP 1 Score: 316 bits (810), Expect = 1.160e-104
Identity = 152/184 (82.61%), Postives = 165/184 (89.67%), Query Frame = 1 
Query:    1 QLFMRALDAENVGSDGVVMVHPTCGPTQADDIPGDVRYRTYEVLKDETANPRVKWAYLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKSCVTGDDFYGAYDAQEFAAANSEELGVQVVPSLNLVFTEEEGYVTADVAEEKGLTKKSLSGTKFRKMLRGGEDIPEWFAFKSVVEVLRE 552
            +LF RALD   VG DGVV+VHPTCGPTQADDIPGDVRY+TYEVLK+ET NPR +W YLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKS VTG+DFYGAYDAQ+FA  +   LGV  VPSLNLV+TEEEGYVTAD A+EKGL++K LSGTKFR+MLRGGEDIPEWFAFKSVV VLRE
Sbjct:  253 ELFTRALDDPLVGEDGVVLVHPTCGPTQADDIPGDVRYKTYEVLKEETHNPRTRWEYLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKSSVTGEDFYGAYDAQDFAKEHGPRLGVMPVPSLNLVYTEEEGYVTADEAKEKGLSEKKLSGTKFRQMLRGGEDIPEWFAFKSVVSVLRE 436
[Close]
BLAST of mRNA_P-canaliculata_contig10132.221.1 vs. uniprot
Match: A0A7S1GIZ6_CYCTE (Sulfate adenylyltransferase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIZ6_CYCTE)

HSP 1 Score: 316 bits (809), Expect = 1.290e-104
Identity = 152/184 (82.61%), Postives = 168/184 (91.30%), Query Frame = 1 
Query:    1 QLFMRALDAENVGSDGVVMVHPTCGPTQADDIPGDVRYRTYEVLKDETANPRVKWAYLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKSCVTGDDFYGAYDAQEFAAANSEELGVQVVPSLNLVFTEEEGYVTADVAEEKGLTKKSLSGTKFRKMLRGGEDIPEWFAFKSVVEVLRE 552
            +LF RALD   VGSDGVV+VHPTCGPTQADDIPGDVR++TYEVLK+ETANPRVKW YLPYSMHMAGPREAIQHM+IRKNFGCTHFIIGRDMAGSKS VTG+DFYGAY+AQ+ A  NS++LGV  VPSLNLV+TEEEGYVTAD A++K L+ K LSGTKFRKMLR G+DIPEWFAFKSVVEVLRE
Sbjct:  245 ELFTRALDDPLVGSDGVVLVHPTCGPTQADDIPGDVRFKTYEVLKEETANPRVKWEYLPYSMHMAGPREAIQHMIIRKNFGCTHFIIGRDMAGSKSSVTGEDFYGAYEAQDIAKDNSDKLGVTPVPSLNLVYTEEEGYVTADYAKDKDLSTKKLSGTKFRKMLRAGDDIPEWFAFKSVVEVLRE 428
[Close]
BLAST of mRNA_P-canaliculata_contig10132.221.1 vs. uniprot
Match: A0A7S2XVD8_9STRA (Sulfate adenylyltransferase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XVD8_9STRA)

HSP 1 Score: 315 bits (807), Expect = 2.830e-104
Identity = 153/186 (82.26%), Postives = 164/186 (88.17%), Query Frame = 1 
Query:    1 QLFMRALDAENVGSDGVVMVHPTCGPTQADDIPGDVRYRTYEVLKDETANPRVKWAYLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKSCVTGDDFYGAYDAQEFAAANSEELGVQVVPSLNLVFTEEEGYVTADVAEEKGLTKKSLSGTKFRKMLRGGEDIPEWFAFKSVVEVLREAN 558
            +LF RALD   VG  GVV+VHPTCGPTQADDIPGDVRY+TYEVLK+ET N R +W YLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKS VTGDDFYGAYDAQ+FA     ELGV  VPSLNLV+TEEEGYVTAD A+EKGL +K LSGTKFR+MLRGGEDIPEWFAFKSVV+VLRE N
Sbjct:  248 ELFTRALDDALVGEGGVVLVHPTCGPTQADDIPGDVRYKTYEVLKEETKNDRTRWEYLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKSSVTGDDFYGAYDAQDFAKLKGPELGVMPVPSLNLVYTEEEGYVTADEAKEKGLGEKKLSGTKFRQMLRGGEDIPEWFAFKSVVKVLRENN 433
[Close]
BLAST of mRNA_P-canaliculata_contig10132.221.1 vs. uniprot
Match: W7TEH2_9STRA (Sulfate adenylyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEH2_9STRA)

HSP 1 Score: 314 bits (805), Expect = 4.180e-104
Identity = 151/184 (82.07%), Postives = 167/184 (90.76%), Query Frame = 1 
Query:    1 QLFMRALDAENVGSDGVVMVHPTCGPTQADDIPGDVRYRTYEVLKDETANPRVKWAYLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKSCVTGDDFYGAYDAQEFAAANSEELGVQVVPSLNLVFTEEEGYVTADVAEEKGLTKKSLSGTKFRKMLRGGEDIPEWFAFKSVVEVLRE 552
            +LF RALDA NVG DG+V+VHPTCGPTQADDIPG VRYRTYEVLK+ETANPR++WAYLPYSMHMAGPREA+QHMMIRKN+GCTHFIIGRDMAGSKS VTG+DFYGAYDAQ FA + S+ELGV  VPSL+LVFTEEEGYVTA+ A+E  L  K LSGTKFR+MLR GEDIPEWFAFKSVV+VLRE
Sbjct:  239 ELFTRALDAPNVGKDGIVLVHPTCGPTQADDIPGIVRYRTYEVLKEETANPRIEWAYLPYSMHMAGPREALQHMMIRKNYGCTHFIIGRDMAGSKSSVTGEDFYGAYDAQNFAKSISKELGVDTVPSLDLVFTEEEGYVTAERAKEANLHIKKLSGTKFRQMLRAGEDIPEWFAFKSVVQVLRE 422
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10132.221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRL3_ECTSI2.360e-11991.94Sulfate adenylyltransferase n=1 Tax=Ectocarpus sil... [more]
A0A7S1H1K0_9STRA1.020e-10884.24Sulfate adenylyltransferase n=1 Tax=Thalassionema ... [more]
A0A5B8N1Q9_9CHLO8.090e-10681.72Sulfate adenylyltransferase n=1 Tax=Chloropicon pr... [more]
A0A7S1U390_9STRA1.360e-10582.07Sulfate adenylyltransferase n=1 Tax=Phaeomonas par... [more]
A0A7S0G9K1_9STRA6.410e-10581.42Sulfate adenylyltransferase n=1 Tax=Proboscia iner... [more]
A0A7S2GMQ8_9STRA6.460e-10583.15Sulfate adenylyltransferase n=1 Tax=Dictyocha spec... [more]
A0A7S2A4Q0_TRICV1.160e-10482.61Sulfate adenylyltransferase n=1 Tax=Trieres chinen... [more]
A0A7S1GIZ6_CYCTE1.290e-10482.61Sulfate adenylyltransferase n=1 Tax=Cyclophora ten... [more]
A0A7S2XVD8_9STRA2.830e-10482.26Sulfate adenylyltransferase n=1 Tax=Attheya septen... [more]
W7TEH2_9STRA4.180e-10482.07Sulfate adenylyltransferase n=3 Tax=Monodopsidacea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10132contigP-canaliculata_contig10132:9710..11763 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score353.6
Seed ortholog evalue5.6e-95
Seed eggNOG ortholog2880.D8LRL3
Preferred nameMET3
KEGG rclassRC02809,RC02889
KEGG koko:K00958
KEGG ReactionR00529,R04929
KEGG Pathwayko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130
KEGG ModuleM00176,M00596
GOsGO:0000096,GO:0000103,GO:0003674,GO:0003824,GO:0004779,GO:0004781,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010134,GO:0016740,GO:0016772,GO:0016779,GO:0019379,GO:0019419,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0070566,GO:0071704,GO:1901564
EggNOG free text desc.sulfate adenylyltransferase (ATP) activity
EggNOG OGsCOG2046@1,KOG0636@2759
EC2.7.7.4
COG Functional cat.P
BiGG ReactioniRC1080.CRv4_Au5_s3_g11218_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size564
Cds size555
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10132.221.1prot_P-canaliculata_contig10132.221.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig10132 9710..11754 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815586.8760753-CDS-P-canaliculata_contig10132:9709..98261622815586.8760753-CDS-P-canaliculata_contig10132:9709..9826Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10132 9710..9826 -
1693494152.2303789-CDS-P-canaliculata_contig10132:9709..98261693494152.2303789-CDS-P-canaliculata_contig10132:9709..9826Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10132 9710..9826 -
1622815586.8886664-CDS-P-canaliculata_contig10132:10083..101971622815586.8886664-CDS-P-canaliculata_contig10132:10083..10197Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10132 10084..10197 -
1693494152.242164-CDS-P-canaliculata_contig10132:10083..101971693494152.242164-CDS-P-canaliculata_contig10132:10083..10197Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10132 10084..10197 -
1622815586.902914-CDS-P-canaliculata_contig10132:10566..106921622815586.902914-CDS-P-canaliculata_contig10132:10566..10692Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10132 10567..10692 -
1693494152.2500365-CDS-P-canaliculata_contig10132:10566..106921693494152.2500365-CDS-P-canaliculata_contig10132:10566..10692Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10132 10567..10692 -
1622815586.9200249-CDS-P-canaliculata_contig10132:11043..111401622815586.9200249-CDS-P-canaliculata_contig10132:11043..11140Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10132 11044..11140 -
1693494152.2646606-CDS-P-canaliculata_contig10132:11043..111401693494152.2646606-CDS-P-canaliculata_contig10132:11043..11140Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10132 11044..11140 -
1622815586.9350116-CDS-P-canaliculata_contig10132:11653..117541622815586.9350116-CDS-P-canaliculata_contig10132:11653..11754Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10132 11654..11754 -
1693494152.2735868-CDS-P-canaliculata_contig10132:11653..117541693494152.2735868-CDS-P-canaliculata_contig10132:11653..11754Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10132 11654..11754 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815586.9460447-UTR-P-canaliculata_contig10132:11754..117631622815586.9460447-UTR-P-canaliculata_contig10132:11754..11763Pelvetia canaliculata dioeciousUTRP-canaliculata_contig10132 11755..11763 -
1693494152.281305-UTR-P-canaliculata_contig10132:11754..117631693494152.281305-UTR-P-canaliculata_contig10132:11754..11763Pelvetia canaliculata dioeciousUTRP-canaliculata_contig10132 11755..11763 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig10132.221.1

>prot_P-canaliculata_contig10132.221.1 ID=prot_P-canaliculata_contig10132.221.1|Name=mRNA_P-canaliculata_contig10132.221.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=185bp
MRALDAENVGSDGVVMVHPTCGPTQADDIPGDVRYRTYEVLKDETANPRV
KWAYLPYSMHMAGPREAIQHMMIRKNFGCTHFIIGRDMAGSKSCVTGDDF
YGAYDAQEFAAANSEELGVQVVPSLNLVFTEEEGYVTADVAEEKGLTKKS
LSGTKFRKMLRGGEDIPEWFAFKSVVEVLREANK*
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mRNA from alignment at P-canaliculata_contig10132:9710..11763-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10132.221.1 ID=mRNA_P-canaliculata_contig10132.221.1|Name=mRNA_P-canaliculata_contig10132.221.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2054bp|location=Sequence derived from alignment at P-canaliculata_contig10132:9710..11763- (Pelvetia canaliculata dioecious)
CAGCTCTTCATGCGCGCGCTCGACGCGGAAAACGTTGGTTCTGACGGTGT
CGTGATGGTCCACCCGACGTGCGGGCCCACCCAGGCGGACGATATCCCCG
GTGATGTGCGGTGAGCATATAACCGTCGTCTATCGCGGGACTCCTGTCCT
TTTTACAGGAACACAAGAAGTGCCATCTTTTGACGCACGTTGGAGGAGGG
CGTTGCGGTGTGTCAGCGCTGTAAGTAATGTGGCCATACCGCGGGGCACG
GGATGGCGTCTCGTGAAACCGAAATATGTCCCACGTAGACGCGCGGCGTG
CGTGATACGACGGGGACGTCTATAGCCGGGATGCAGCGTGACTGGTTTTA
CTGGGACACTTTGCTGTCTACATATGTGTCGTGTATCTCGGGGCCTCTGT
TTGTCTGTCTCAATTGTCTTTTTGTGTCCCTGTGCATCTTGTTGGTGCAT
TTTCATTGGAGCGCGTGGAGGTTGTGTGTCCCCGCTCCAGCGCGTACGTC
CATTTTATATTTCGCCCACCCCTCCCTCCACGACTGTCGGCTAGCCTCTA
CATCTTCGAAAAACGCATGGCTTCCCTACATCATGAGCCATTTTCTTTCT
CAAATCGCGATACGCCATCCAAGGTACCGCACGTACGAGGTGCTGAAGGA
CGAGACGGCCAACCCGCGCGTCAAGTGGGCGTACCTGCCGTACTCCATGC
ACATGGCCGGCCCGCGAGAGGTGAAAGCCGCGCAGCACAGCAACCTCGTG
ATTTCGCCGCACCCGTCACCATGACATGTTCTTTGCTAATTACAGCGCCA
GTATCGTTGTCATTGGTAGGGAGGAATGCAACGCTGGGAGTAAACAATGC
TGCAGTGGAGACCGTCACACAGCAGCGCTGTCTCTTGAAAGCATAGTGTT
CCATCCCTCCGTTGGCTTTCTCGGGTCACCTTTGGAAAACCGGCTCAAGC
GCTTGGATAAACGTCGAAGTTTTTTATTGTTCATTTGCATGCTTGTGGTC
GTGCATGCGTCAAAATAAAGGGTTTAGTGTTTTTGGTGTATGTATGTGTG
TGCTCCCCGGATTCGCTTCAGGCGATCCAGCATATGATGATCCGTAAGAA
CTTCGGTTGCACGCACTTCATCATCGGAAGGGACATGGCGGGCTCCAAGA
GCTGCGTCACGGGAGATGACTTCTACGGGGCCTACGATGCTCAAGAGGTG
AGACCTCCCTTGTCTCGACGACTTAAACGTATTGGATCGCCCAAGGCATC
CCATGACGGGAGATTATGAAGAATATCTGACGATCGGGGGTCGAAGAGTG
CGACAACTTTATTTCAAACCCATTCTATAGATTTACACACACACACACGC
AAACTTAACTTACCAATTTACGCTTTTCGATCGCGGATTTCACCTGCTAC
CTTCTCGCGATAAAAAATTGAGAGGAGCACCGCAGAAGGAAGGTTTCCTG
TGTGGCCTTCCTCCTGTATGACCGCGGCTTGTGCGTCCACATATTAACCG
AAAGGTGCAGTCTGACGTCCACAATAAATGACAACAAACAAACCAACATC
AAACTGTGTCTGGTAGTTTGCGGCGGCTAACTCGGAGGAGCTCGGAGTGC
AGGTCGTCCCGTCTCTGAACTTGGTTTTTACAGAGGAGGAGGGGTACGTG
ACGGCCGACGTTGCTGAGGAAAAGGGCTTGGTGAGTCATCATCGATGACA
AGTTGCGCCGCATGCTGTTCGCATACACACTCCATAAACCATGTGTTTCT
TTTCCTTTTCTTGATTCTTCGGAGTTACAGGAGTTGAGGTGGCGTTCGTT
GAACGGCTGCTTAACCAACGCCTACGACTCCTTTCCATGTTCATCAAAAG
GGTAGGCAAATGTTTGTTGCCTCCGAACCGTCCATATTATACACTGTACT
TGAGTATGTATGGCGGATTTCTCTTCCTCGTGCGCAGACGAAGAAGTCGC
TGTCGGGCACCAAGTTCCGCAAGATGCTTCGCGGCGGAGAGGATATCCCA
GAGTGGTTTGCGTTCAAGTCCGTGGTCGAAGTGCTGCGCGAGGCGAACAA
GTAA
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Coding sequence (CDS) from alignment at P-canaliculata_contig10132:9710..11763-

>mRNA_P-canaliculata_contig10132.221.1 ID=mRNA_P-canaliculata_contig10132.221.1|Name=mRNA_P-canaliculata_contig10132.221.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1110bp|location=Sequence derived from alignment at P-canaliculata_contig10132:9710..11763- (Pelvetia canaliculata dioecious)
ATGCGCGCGCTCGACGCGGAAAACGTTGGTTCTGACGGTGTCGTGATGGT
CCACCCGACGTGCGGGCCCACCCAGGCGGACGATATCCCCGGTGATGTGC
GATGCGCGCGCTCGACGCGGAAAACGTTGGTTCTGACGGTGTCGTGATGG
TCCACCCGACGTGCGGGCCCACCCAGGCGGACGATATCCCCGGTGATGTG
CGGTACCGCACGTACGAGGTGCTGAAGGACGAGACGGCCAACCCGCGCGT
CAAGTGGGCGTACCTGCCGTACTCCATGCACATGGCCGGCCCGCGAGAGG
TACCGCACGTACGAGGTGCTGAAGGACGAGACGGCCAACCCGCGCGTCAA
GTGGGCGTACCTGCCGTACTCCATGCACATGGCCGGCCCGCGAGAGGCGA
TCCAGCATATGATGATCCGTAAGAACTTCGGTTGCACGCACTTCATCATC
GGAAGGGACATGGCGGGCTCCAAGAGCTGCGTCACGGGAGATGACTTCTA
CGGGGCCTACGATGCTCAAGAGGCGATCCAGCATATGATGATCCGTAAGA
ACTTCGGTTGCACGCACTTCATCATCGGAAGGGACATGGCGGGCTCCAAG
AGCTGCGTCACGGGAGATGACTTCTACGGGGCCTACGATGCTCAAGAGTT
TGCGGCGGCTAACTCGGAGGAGCTCGGAGTGCAGGTCGTCCCGTCTCTGA
ACTTGGTTTTTACAGAGGAGGAGGGGTACGTGACGGCCGACGTTGCTGAG
GAAAAGGGCTTGTTTGCGGCGGCTAACTCGGAGGAGCTCGGAGTGCAGGT
CGTCCCGTCTCTGAACTTGGTTTTTACAGAGGAGGAGGGGTACGTGACGG
CCGACGTTGCTGAGGAAAAGGGCTTGACGAAGAAGTCGCTGTCGGGCACC
AAGTTCCGCAAGATGCTTCGCGGCGGAGAGGATATCCCAGAGTGGTTTGC
GTTCAAGTCCGTGGTCGAAGTGCTGCGCGAGGCGAACAAGTAAACGAAGA
AGTCGCTGTCGGGCACCAAGTTCCGCAAGATGCTTCGCGGCGGAGAGGAT
ATCCCAGAGTGGTTTGCGTTCAAGTCCGTGGTCGAAGTGCTGCGCGAGGC
GAACAAGTAA
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