prot_P-canaliculata_contig101312.220.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig101312.220.1
Unique Nameprot_P-canaliculata_contig101312.220.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length194
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101312.220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 2..193
e-value: 1.7E-21
score: 78.4
NoneNo IPR availablePFAMPF13646HEAT_2coord: 99..187
e-value: 2.4E-8
score: 34.2
NoneNo IPR availablePANTHERPTHR12697PBS LYASE HEAT-LIKE PROTEINcoord: 94..190
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 6..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig101312contigP-canaliculata_contig101312:202..783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig101312.220.1mRNA_P-canaliculata_contig101312.220.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig101312 202..783 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig101312.220.1 ID=prot_P-canaliculata_contig101312.220.1|Name=mRNA_P-canaliculata_contig101312.220.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=194bp
VTTVLISDNVQVSRFAAEALVEIGKAAVPRLITVLKESNVKDTRIITLNT
LYQISIPSDSAQQAIEDVVSKSNDDPYLLESSIYALGTSSPDIERAVQTL
IKVPSDSSFIARIAVARTLGDIGRGFPASTKKLLELTKDMNNRVQLNAIE
SLAKVASKSDIDVISRLRNFCEPTSQPELRRVALAAIKQVEART
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold