prot_P-canaliculata_contig100933.178.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100933.178.1
Unique Nameprot_P-canaliculata_contig100933.178.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length254
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100933.178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..254
e-value: 6.1E-19
score: 69.8
NoneNo IPR availablePANTHERPTHR34630FAMILY NOT NAMEDcoord: 2..127
coord: 92..234
NoneNo IPR availablePANTHERPTHR34630:SF9coord: 92..234
NoneNo IPR availablePANTHERPTHR34630:SF9coord: 2..127
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100933contigP-canaliculata_contig100933:162..923 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100933.178.1mRNA_P-canaliculata_contig100933.178.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100933 162..929 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100933.178.1 ID=prot_P-canaliculata_contig100933.178.1|Name=mRNA_P-canaliculata_contig100933.178.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=254bp
MLELRCTRLKKIDALSNVNLSYLLLDGCKKLTSLNPLKNVASLKELDVRD
CYGFKKIDLSDWKQRNLKKITVSDCDGLVVLNGFSQCSKRCELLIDNCNA
LKEIQIQDDSSLDSITVNRCPNLDSINGLPQALSELRIYFCGALTKVSGG
KIPNLDSVEIGACSKLVSFDRYLENVKYFKLIQCHGIKQLSLRQPMPRLA
SVSVEYCDGLIAIDGLPESVNKLKVTGCEALKRVTPTAGLPNLSEANFID
CPNL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf