prot_P-canaliculata_contig1009.167.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig1009.167.1
Unique Nameprot_P-canaliculata_contig1009.167.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length389
Homology
BLAST of mRNA_P-canaliculata_contig1009.167.1 vs. uniprot
Match: D7G0G0_ECTSI (ILEI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G0_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 2.710e-58
Identity = 145/326 (44.48%), Postives = 177/326 (54.29%), Query Frame = 0
Query:   21 LMFRVLEDAPFVQSLPESGSPADQTRSHEQGNRLGVDTEGDILEHRVVHGFRWYRVRVTRHGSSNSDQPTNVEGWVPLRSCDFSDWESMESEERAELEEEVLIQLLDPVDGQVIEPESSRALMAGVWNR-------------ENTGDRPDGGGPEGSGIGGVSTRPGEGADGVDGAQRGEGLSNSDDGSASVRPVWLALAGGKLFFREKASGTLSADEIAVLLPSDLSLESVVSLADLPIPGFPRSS----EADHEDDTWEDTNDAEKDGDAGE-----RLVEFADVERGATVVECSSNSEASEGILQVNILIPREEFRREFHQSG 324
            L FR LE    ++ +PESG P +     E    +  D EG IL+ +VVHGFRWYRVRVT    S   Q  N+ GWVPL+S D SD+ S++S+E+A       I++LDP  G+ IEP+S RAL   +W+              E++G R D                 E                     A+VRPVWLALAGGKLF REKASG LSADEIAVL PSDLSL  VVSLADLPIPGFP S     +A  ED   E    A +DG  GE      ++EFA  + GA+V ECSSNSE S G+LQ N+L+  E  R  F   G
Sbjct:  725 LRFRALEFKAVLRQVPESGCPEEGDDFGEGEEAMEEDDEGYILDCKVVHGFRWYRVRVTSRAVST--QTLNIVGWVPLKSVDDSDYGSLDSDEKAXXXXXXFIEILDPTTGETIEPDSPRALNPPIWDEAREASAAAVQDFNEDSGGRRDSRAXXXXXXXXXXXXTAE--------------------PAAVRPVWLALAGGKLFVREKASGALSADEIAVLRPSDLSLVEVVSLADLPIPGFPASPTEARQAKPEDGLEEKQEVAPEDGGVGEVAETEDVMEFAYADLGASVAECSSNSELSGGVLQNNLLVREESDRLPFPSGG 1028          
BLAST of mRNA_P-canaliculata_contig1009.167.1 vs. uniprot
Match: A0A6H5K114_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K114_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 4.030e-13
Identity = 89/293 (30.38%), Postives = 104/293 (35.49%), Query Frame = 0
Query:   21 LMFRVLEDAPFVQSLPESGSPADQTRSHEQGNRLGVDTEGDILEHRVVHGFRWYRVRVTRHGSSNSDQPTNVEGWVPLRSCDFSDWESMESEERAELEEEVLIQLLDPVDGQVIEPESSRALMAGVWNRENTGDRPDGGGPEGSGIGGVSTRPGEGADGVDGAQRGEGLSNSDDGSASVRPVWLALAGGKLFFREKASGTLSADEIAVLLPSDLSLESVVSLADLPIPGFPRSSEADHE----DDTWEDTNDAEKDGDAG-----ERLVEFADVERGATVVECSSNSEASEGI 304
            L FR LE    ++ +PESG P +     E G  +  D EG IL+ +VVHGFRWYRVRVT                                                           +RA                           VST+                                            ASG LSADEIAVL PSDL+L  VVSLADLPIPGFP S    H+    D   E      +DG  G     E ++EFA  + GA V ECSSNSE S GI
Sbjct:  744 LRFRALEFRDVLREVPESGYPEEGNAFGEGGEAMEEDDEGYILDCKVVHGFRWYRVRVT-----------------------------------------------------------TRA---------------------------VSTQ--------------------------------------------ASGALSADEIAVLRPSDLALVEVVSLADLPIPGFPASPTEAHQAKPKDGLEEKQEVGPEDGGLGDVAGTEDVMEFAYADLGAFVAECSSNSELSGGI 906          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1009.167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0G0_ECTSI2.710e-5844.48ILEI domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K114_9PHAE4.030e-1330.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..388
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig1009contigP-canaliculata_contig1009:9194..15246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig1009.167.1mRNA_P-canaliculata_contig1009.167.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig1009 9080..15264 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig1009.167.1 ID=prot_P-canaliculata_contig1009.167.1|Name=mRNA_P-canaliculata_contig1009.167.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=389bp
MTNVISSSVAAAAAAEAGRRLMFRVLEDAPFVQSLPESGSPADQTRSHEQ
GNRLGVDTEGDILEHRVVHGFRWYRVRVTRHGSSNSDQPTNVEGWVPLRS
CDFSDWESMESEERAELEEEVLIQLLDPVDGQVIEPESSRALMAGVWNRE
NTGDRPDGGGPEGSGIGGVSTRPGEGADGVDGAQRGEGLSNSDDGSASVR
PVWLALAGGKLFFREKASGTLSADEIAVLLPSDLSLESVVSLADLPIPGF
PRSSEADHEDDTWEDTNDAEKDGDAGERLVEFADVERGATVVECSSNSEA
SEGILQVNILIPREEFRREFHQSGVFLRPCRLRPSPCGGPQKNEGCARGW
SRALPVHRGGLCRSSGELAGGNVDGRPSLDNLGAVEPA*
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