mRNA_P-canaliculata_contig10062.137.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig10062.137.1
Unique NamemRNA_P-canaliculata_contig10062.137.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig10062.137.1 vs. uniprot
Match: A0A6H5KR71_9PHAE (AAA_28 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KR71_9PHAE)

HSP 1 Score: 423 bits (1088), Expect = 1.800e-145
Identity = 216/351 (61.54%), Postives = 257/351 (73.22%), Query Frame = 1
Query:   37 LFNNGVSLEALGGPATRFAFQWSILSLQMTLEDGFERVARASGQPSILFCDRGLMDGSVYMPADEWATLVKANGLDELKLRDGRYDAVLHLVTAACGAEDHYSLDNNEARSEDAELARDVDKRTEAVWLGHPRHFIFDNSTDFEPKLDRVATTVSKLVGLPCRPRKLGKFLLAQPPPPPEEFPVRAEAFQVEKIFLQKKDVGENGGRAVEILP--------------------ELDGPAS-CISSESFLEKRGRQGELGLFLFETTTVSSYDDGTVAEVTRRLSAEEYEAIESQRRDQARQKVSQLRVSFLWASQAFELQTDVKPAYGTSVLYRRSEGGELSLPPFLKVDE 1026
            +F NGV  + LG  A RFAFQWSILSLQM LEDGFER ARA GQPSIL CDRGLMDGSVYMP +EW +LV+ N +DE  LRDGRYD +LHLVTAACGAE+HYSL+NNEARSE  E+ARDVD RTE VWLGHPRH +FDNSTDFE K+ R+ +  S+LVGLPCRPRKL KFLL +PPPP EEFPV  + F  EK+FL  +D  E G      +P                     +D PA+ C+SSESFLEKRG+  +  +F++  TT+S++ DGTV EVTR+LSA  + +IE +R D AR KV Q RV FLW  Q FEL TD++PA+G +VL+RRSEGGELSLP FLKVD+
Sbjct:    1 MFTNGVGFQDLGEKAKRFAFQWSILSLQMNLEDGFERFARACGQPSILLCDRGLMDGSVYMPPEEWDSLVEGNSMDERSLRDGRYDGILHLVTAACGAEEHYSLENNEARSESVEMARDVDGRTEGVWLGHPRHLVFDNSTDFEAKMSRITSAASRLVGLPCRPRKLCKFLLFEPPPPLEEFPVPVKEFHAEKVFLVGRDTAEAGESGFMTVPADTSGGDASGEXXXXXXXXXHVDVPAAVCVSSESFLEKRGKT-KSEVFVYSITTISTFSDGTVTEVTRQLSAARHASIEKERADPARPKVIQRRVCFLWERQVFELHTDMEPAFGINVLHRRSEGGELSLPTFLKVDD 350          
BLAST of mRNA_P-canaliculata_contig10062.137.1 vs. uniprot
Match: I2CP47_NANGC (AAA_28 domain-containing protein (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP47_NANGC)

HSP 1 Score: 263 bits (672), Expect = 8.130e-81
Identity = 154/348 (44.25%), Postives = 215/348 (61.78%), Query Frame = 1
Query:    1 FLVFTVPEAATSLFNNGVSL-EALGGPATRFAFQWSILSLQMTLEDGFERVARASGQPSILFCDRGLMDGSVYMPADEWATLVKANGLDELKLRDGRYDAVLHLVTAACGAEDHYSLDNNEARSEDAELARDVDKRTEAVWLGHPRHFIFDNSTDFEPKLDRVATTVSKLVGLPCRPRKLGKFLLAQPPPPPEEFPVRAEAFQVEKIFLQKKDVGENGGRAVEILPELDGPASCISSESFLEKRGRQGELGLFLFETTTVSSYDDGTVAEVTRRLSAEEYEAIESQRRDQARQKVSQLRVSFLWASQAFEL---QTDVKPAYGTSV--LYRRSEGGELSLPPFLKVDE 1026
            F VFTVPEAAT+L++NGV+L + LG   T++ FQ ++L  Q+ LEDG ER+AR+ G+PS++ CDRG +DG+ Y+  + W  LVK  GL+ L +R+GRYDA+ HLVTAA GAE  YSL NN  R+E  E AR+VD +T+ VW GHPRH++ DNSTDFE KL RV    ++LVGLP  PR   ++ L + P P + F V  E  QV K++L       N GR     P  DG    +   +++E+R + G +    +  T+    DDG  AE+ R + A E+ +  +   D +R++V Q R SFLWA QAF +    +D K  +G  +  L R+++GG    PPFL V E
Sbjct:  127 FRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLNNVTRTESPEFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKP-DSFTVPFEKTQVRKVYLM------NVGR-----PLPDGRKVSVEY-NYVEERSQDGSVA---YAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGE 458          
BLAST of mRNA_P-canaliculata_contig10062.137.1 vs. uniprot
Match: A0A4D9CZL1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZL1_9STRA)

HSP 1 Score: 264 bits (674), Expect = 1.030e-80
Identity = 155/348 (44.54%), Postives = 214/348 (61.49%), Query Frame = 1
Query:    1 FLVFTVPEAATSLFNNGVSL-EALGGPATRFAFQWSILSLQMTLEDGFERVARASGQPSILFCDRGLMDGSVYMPADEWATLVKANGLDELKLRDGRYDAVLHLVTAACGAEDHYSLDNNEARSEDAELARDVDKRTEAVWLGHPRHFIFDNSTDFEPKLDRVATTVSKLVGLPCRPRKLGKFLLAQPPPPPEEFPVRAEAFQVEKIFLQKKDVGENGGRAVEILPELDGPASCISSESFLEKRGRQGELGLFLFETTTVSSYDDGTVAEVTRRLSAEEYEAIESQRRDQARQKVSQLRVSFLWASQAFEL---QTDVKPAYGTSV--LYRRSEGGELSLPPFLKVDE 1026
            F VFTVPEAAT+L++NGV+L + LG   T++ FQ ++L  Q+ LEDG ER+AR+ G+PS++ CDRG +DG+ Y+  D W  LVK  GL+ L +R+GRYDA+ HLVTAA GAE  YSL NN  R+E  E AR+VD +T+ VW GHPRH++ DNSTDFE KL RV    ++LVGLP  PR   ++ L + P P + F V  E  QV K++L       N GR     P  DG    +   +++E+R + G +    +  T+    DDG  AE+ R + A E+ +  +   D +R++V Q R SFLWA QAF +     D K  +G  +  L R+++GG    PPFL V E
Sbjct:  152 FRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKDLWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLNNVTRTESPEFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKP-DSFTVPFEKTQVRKVYLM------NVGR-----PLPDGRKVSVEY-NYVEERSQDGSVA---YAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHLDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGE 483          
BLAST of mRNA_P-canaliculata_contig10062.137.1 vs. uniprot
Match: A0A7S2W782_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W782_9STRA)

HSP 1 Score: 223 bits (568), Expect = 9.950e-66
Identity = 137/329 (41.64%), Postives = 192/329 (58.36%), Query Frame = 1
Query:    1 FLVFTVPEAATSLFNNGVSLEALGGPATRFAFQWSILSLQMTLEDGFERVARASGQPSILFCDRGLMDGSVYMPADEWATLVKANGLDELKLRDGRYDAVLHLVTAACGAEDHYSLDNNEARSEDAELARDVDKRTEAVWLGHPRHFIFDNSTDFEPKLDRVATTVSKLVGLPCRPRKLGKFLLAQPPPPPEEFP--VRAEAFQVEKIFLQKKDVGENGGRAVEILPELDGPASCISSE-SFLEKRGRQGELGL--FLFETTTVSSYDDGTVAEVTRRLSAEEYEAIESQRRDQARQKVSQLRVSFLWASQAFELQTDVKPAYGTSVLY 972
            F V TVPEA T + +NG S+E        F  Q +++ +Q+ LED FER+ RA G+PS++ CDRGLMDG+ Y+ ++EW +     G+  + LR+GRY+AV HLVTAA GAE  Y+L+NNEAR+E AE AR +D  +   W+GH    +FDNSTDFE K+ R+    ++LVGLP    ++ +  L +  P  E+FP  V+ + F VEK++L     G N     EI    +GP    + E SF+ KR + GE G     +  T VS   D  V EV R ++A EY A   + RD  R  V Q R+SFLW  Q+F +    +P  G  +L+
Sbjct:   76 FEVMTVPEAFTIMASNGFSMEYFSVGGMPFEVQNAVMDMQIALEDSFERILRARGKPSVMLCDRGLMDGAAYVTSEEWDSFCNTRGVSSIDLREGRYNAVFHLVTAAEGAEQFYTLENNEARTETAEEARQLDVSSRRAWVGHHSLSVFDNSTDFEGKMQRLVDATARLVGLPSNLHRVARKYLLRSKPNLEDFPESVKYQVFDVEKVYLYD---GTN-----EIS---EGPPQKYAEEYSFIRKRTQIGEGGGKGTSYGLTVVSITHDRKVIEVKRIINAREY-ASAFKTRDLTRHVVRQQRISFLWNMQSFNIHIYNEPDTGLCILH 392          
BLAST of mRNA_P-canaliculata_contig10062.137.1 vs. uniprot
Match: A0A1Z5JYV0_FISSO (AAA_28 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYV0_FISSO)

HSP 1 Score: 221 bits (562), Expect = 2.060e-65
Identity = 135/351 (38.46%), Postives = 200/351 (56.98%), Query Frame = 1
Query:    1 FLVFTVPEAATSLFNNGVSLEALGGPATRFAFQWSILSLQMTLEDGFERVARASGQPSILFCDRGLMDGSVYMPADEWATLVKANGLDELKLRDGRYDAVLHLVTAACGAEDHYSLDNNEARSEDAELARDVDKRTEAVWLGHPRHFIFDNSTDFEPKLDRVATTVSKLVGLPCR-PRKLGKFLLAQPPP----PPEEFPVRAEAFQVEKIFLQKKDVGENGGRAVEILPELDGPASCISSESFLEKRGRQGELGLFLFETTTVSSYDDGTVAEVTRRLSAEEYEAIESQRRDQARQKVSQLRVSFLWASQAFELQTDVKPAYGTSVLYRRSEGG-----ELSLPPFLKVD 1023
            F   T PEA T+L +NG++++           Q ++L +QM LEDG  RV +A G+P ++ CDRG MDGSVYMP  E++ L+       +++RD RYDA+ HL+TAA GAE  Y+L+NN+ R+E  E AR+VD++T+  W+GHP  +  DNSTDFE K+ R+  T+SK+VGLP    R+  KFLL   P     PPE   +  + F+VEKI+L+              + +     S I   + ++  GR+  LG  ++++T     +DG + E  R +S  EY +  S  RD +R  V Q R+SFL+  Q+F +     P  G  +L+ + E       E+ LPPFL+VD
Sbjct:   46 FECITCPEAYTTLSSNGMNVDFFSTQGMPKVIQRTVLEVQMALEDGIHRVLKARGKPGVMLCDRGTMDGSVYMPQKEFSDLLSEMDTHIVQIRDNRYDAIFHLITAADGAEPFYTLENNKVRTETKEEAREVDQKTQNAWVGHPHFYFIDNSTDFEGKMSRLVDTLSKIVGLPSNLKRRSAKFLLKSKPDLSKFPPE---IAYKEFEVEKIYLKH-------------IHDDKSSYSFIRRRTNIDPDGRR--LGS-VYQSTLAQWTEDGELIEQKRIISEREYMST-SATRDTSRHVVQQRRISFLYNKQSFVVHIFQSPKEGLCILHAQVEASGKAEPEVDLPPFLEVD 376          
BLAST of mRNA_P-canaliculata_contig10062.137.1 vs. uniprot
Match: A0A7S2R796_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R796_9STRA)

HSP 1 Score: 221 bits (562), Expect = 6.490e-65
Identity = 136/362 (37.57%), Postives = 198/362 (54.70%), Query Frame = 1
Query:    1 FLVFTVPEAATSLFNNGVSLEALGGPATRFAFQWSILSLQMTLEDGFERVARASGQPSILFCDRGLMDGSVYMPADEWATLVKANGLD-ELKLRDGRYDAVLHLVTAACGAEDHYSLDNNEARSEDAELARDVDKRTEAVWLGHPRHFIFDNSTDFEPKLDRVATTVSKLVGLPCRPRKLGKFLLAQPPPPPEEFPV---------RAEAFQVEKIFLQKKDVGENGGRAVEILPELDGPASCISSE-------SFLEKRGRQGELGLFLFETTTVSSYDDGTVAEVTRRLSAEEYEAIESQRRDQARQKVSQLRVSFLWASQAFELQTDVKPAYGTSVLY----RRSEGGELSLPPFLKVD 1023
            F V+TVPEAAT LF NGV    L G     AFQ +++ +Q+ LED F  +A A+G+PS++ CDRG  DG  Y+    W  ++   G+D ++ +R+GRY+AV HLVTAA GAE  Y+L NN ARSE  E AR+VD +T+  W GHP H IFDNS+ FE K+ RV   ++++VGLP   R   KFLL+      E FP            + F+VEKI++  +        AV + P     AS  +SE       SF+ +R + G      +  T V  +  G   EV R L+  EY  +++   D +R  V Q R  FLW  + + +   V+P    ++L+    + ++  E+ +PPF+ V+
Sbjct:   53 FRVYTVPEAATMLFMNGVRFSDLDGEDRVVAFQTALMDIQLNLEDSFSAMATATGEPSVVLCDRGACDGKAYISPGGWQRVIAKRGMDNDIMIREGRYNAVFHLVTAANGAEKFYTLANNNARSEPPEEAREVDVKTQRAWTGHPNHLIFDNSSGFEGKMQRVVDQMARIVGLPLVQRTATKFLLSSAST--EAFPAVLRDTLGADAVQVFEVEKIYVLHQPQA-----AVSLRPS-QAAASTFASEPETVLQYSFIRRRTQDG---FSAYGHTLVKRHPTGERVEVKRILNRREYNWMKNMYADPSRHVVVQRRHFFLWEGRTYSIHQYVQPRNDLAILHCQASQAAQDAEVRIPPFVTVE 403          
BLAST of mRNA_P-canaliculata_contig10062.137.1 vs. uniprot
Match: K3WRS4_GLOUD (AAA_28 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRS4_GLOUD)

HSP 1 Score: 219 bits (558), Expect = 1.410e-64
Identity = 135/347 (38.90%), Postives = 187/347 (53.89%), Query Frame = 1
Query:    1 FLVFTVPEAATSLFNNGVSLEALGGPATRFAFQWSILSLQMTLEDGFERVARASGQPSILFCDRGLMDGSVYMPADEWATLVKANGLDELKLRDGRYDAVLHLVTAACGAEDHYSLDNNEARSEDAELARDVDKRTEAVWLGHPRHFIFDNSTDFEPKLDRVATTVSKLVGLPCRPRKLGKFLLAQPPPPPEEFPVRAEAFQVEKIFLQKKDVGENGGRAVEILPELDGPASCISSESFLEKRGRQGELGLFLFETTTVSSYDDGTVAEVTRRLSAEEYEAIESQRRDQARQKVSQLRVSFLWASQAFELQTDVKPAY--GTSVLYRRSEGGE----LSLPPFLKVD 1023
            F V+ VPEA+T L   G     L        FQW IL LQM+LED F  +A+ SG+P ++ CDRG+MDGS YM +++W  L   + LD + LRD RY A+ HLVTAA GAE  YSLDNN  R E  E AR++D RT   W+GHP+ ++FDNST FE K+ R+  T + L G+P   +   KFLLA PP      P   E F+VEK++L                     P S  +S+ +   R R  + G+  +  TTV     G    + R LSA EY      R D  R  + Q R+ FL+ +Q+F++    +PA   G ++L+ ++ G      +SLP FL ++
Sbjct:   66 FRVYVVPEASTLLQTGGAFFLDLK-ETDILNFQWQILKLQMSLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTSEQWEELKAQHDLDTVTLRDTRYIAIFHLVTAAEGAEKFYSLDNNGIRIESIEQAREIDARTCRAWIGHPKLYVFDNSTGFEGKMQRLVDTAAGLCGIPTTLKASRKFLLASPP---SSIPFHHEDFEVEKVYLT--------------------PESAETSKDYSFVRCRS-QYGIPAYGMTTVRYLQTGDAVHLKRILSAREYSYAVRHRNDPTRDVIKQQRMCFLYNNQSFQIHVYKEPASMAGLAILHVQASGDNSADTISLPSFLNIE 387          
BLAST of mRNA_P-canaliculata_contig10062.137.1 vs. uniprot
Match: A0A7S2UL73_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UL73_9STRA)

HSP 1 Score: 219 bits (557), Expect = 5.080e-64
Identity = 141/363 (38.84%), Postives = 198/363 (54.55%), Query Frame = 1
Query:    1 FLVFTVPEAATSLFNNGVSLEALGGPATRFAF-QWSILSLQMTLEDGFERVARASGQPSILFCDRGLMDGSVYMPADEWATLVKANGLDE-LKLRDGRYDAVLHLVTAACGAEDHYSLDNNEARSEDAELARDVDKRTEAVWLGHPRHFIFDNSTDFEPKLDRVATTVSKLVGLPCRPRKLGKFLLAQPPPPPEEFP--VRAEAFQVEKIFLQKKDVGE------NGGRAVEILPELDGPASCISSESFLEKRG---RQGELGLFLFETTTVSSYDDGTVAEVTRRLSAEEYEAIESQRRDQARQKVSQLRVSFLWASQAFELQTDVKPAYGTSVLYRRSE---------GGELSLPPFLKVD 1023
            F V T PEA   L +NG+SL+ L          Q +++ L + LEDG E++ RA G+PS++ CDRGLMDGS Y+   EW   ++  G+     LR+GRY+AV HLVTAA GAE +Y+L+NN  RSE  ELAR VD++T+A W+GHP+  +FDNSTDFE KL RV    +KLVGLP    ++    + Q  P   +FP  V+   FQVEK++L     GE      + GR +     L  P       SF+ KR    RQG+    ++  TTV    D    E  R ++  EY A   + RD  R  V Q R++F+W   +F +    +P     +L+ ++E           ++ LPPFL V+
Sbjct:   74 FEVMTCPEAFGILASNGLSLDYLAAVHGMSPIVQSTVMDLMICLEDGVEQILRARGRPSVMLCDRGLMDGSAYLTQTEWDAFLEKRGVQNPCNLREGRYNAVFHLVTAAEGAERYYTLENNAVRSETPELARVVDQKTQAAWVGHPKLCVFDNSTDFEGKLQRVVNATAKLVGLPSSLSRVTTKYILQGKPDLSKFPPDVKYHLFQVEKVYLYDDKQGEEQQGDASEGRRLRAY-SLSLPLDYTEEYSFVRKRSQITRQGKTIGTVYGQTTVKRTRDEQTIETKRIITDREY-ANALKNRDMKRHIVEQTRITFIWNHASFNIHMYSEPVSDLCILHAQTEVASDVDESDESDVDLPPFLDVN 434          
BLAST of mRNA_P-canaliculata_contig10062.137.1 vs. uniprot
Match: A0A5D6YST2_9STRA (AAA_28 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YST2_9STRA)

HSP 1 Score: 215 bits (548), Expect = 7.210e-63
Identity = 133/346 (38.44%), Postives = 187/346 (54.05%), Query Frame = 1
Query:    1 FLVFTVPEAATSLFNNGVSLEALGGPATRFAFQWSILSLQMTLEDGFERVARASGQPSILFCDRGLMDGSVYMPADEWATLVKANGLDELKLRDGRYDAVLHLVTAACGAEDHYSLDNNEARSEDAELARDVDKRTEAVWLGHPRHFIFDNSTDFEPKLDRVATTVSKLVGLPCRPRKLGKFLLAQPPPPPEEFPVRAEAFQVEKIFLQKKDVGENGGRAVEILPELDGPASCISSESFLEKRGRQGELGLFLFETTTVSSYDDGTVAEVTRRLSAEEYEAIESQRRDQARQKVSQLRVSFLWASQAFELQTDVKPAY--GTSVLYRRSEGGE---LSLPPFLKVD 1023
            F V+ VPEA+T L   G     L        FQW IL LQM+LED F  +A+ SG+P ++ CDRG+MDGS YM  ++W  L   + LD + LRD RY A+ HLVTAA GAE  YSLDNN  R E+ E AR++D RT   W+GHP+ F+FDN+T FE K+ R+  T + L G+P   +   KFLLA+ P    + P   E F+VEK++L                     P S  +S+ +   R R  + G+  +  TTV     G    + R LSA EY      R D  R+ + Q R+ FL+ +Q+F++    +P    G +VL  ++ G +   +S P FL ++
Sbjct:   66 FRVYVVPEASTLLQTGGAFFLDLK-ETDILNFQWQILKLQMSLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMSPEQWEELKTQHDLDTVTLRDTRYIAIFHLVTAASGAEKFYSLDNNGIRIENIEQAREIDARTCRAWIGHPKLFVFDNTTGFEGKMQRLVDTAANLCGVPTTLKASRKFLLAKAPES-SDIPFHHEDFEVEKVYLT--------------------PESAETSKDYSFVRCRS-QYGIPAYGMTTVRYLQTGDAVHLKRILSAREYSYAVRHRNDPTREVIKQQRICFLYNNQSFQVHVYKEPGSMAGQAVLQVQASGDKSETISFPSFLAIE 388          
BLAST of mRNA_P-canaliculata_contig10062.137.1 vs. uniprot
Match: A0A0P1A8H1_PLAHL (Isoform b n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8H1_PLAHL)

HSP 1 Score: 213 bits (543), Expect = 2.280e-62
Identity = 133/347 (38.33%), Postives = 189/347 (54.47%), Query Frame = 1
Query:    1 FLVFTVPEAATSLFNNGVSLEALGGPATRFAFQWSILSLQMTLEDGFERVARASGQPSILFCDRGLMDGSVYMPADEWATLVKANGLDELKLRDGRYDAVLHLVTAACGAEDHYSLDNNEARSEDAELARDVDKRTEAVWLGHPRHFIFDNSTDFEPKLDRVATTVSKLVGLPCRPRKLGKFLLAQPPPPPEEFPVRAEAFQVEKIFLQKKDVGENGGRAVEILPELDGPASCISSESFLEKRGRQGELGLFLFETTTVSSYDDGTVAEVTRRLSAEEYEAIESQRRDQARQKVSQLRVSFLWASQAFELQTDVKPA--YGTSVLYRRSE---GGELSLPPFLKVDE 1026
            F V+ VPEA+T L   G     L        FQW ILSLQ++LED F  +A  SG+P ++ CDRG+MDGS YM  ++W  L   + LD + LRD RY A+ HLVTAA GAE  YSL+NN  R E  E AR +DKRT   W+GHP+ ++FDNST FE K+ R+  T ++L G+P   +   K+LLA+ P      P   E F+VEK++L+                    P +  SS  +   R R  + G+  +  TTV   D G V  + R LSA EY      R D  R  + Q R+ FL+ +Q+F++    +PA   G S+L+ ++      ++ +P FL +++
Sbjct:   64 FRVYVVPEASTLLQTGGAFFLDLQEKDI-LNFQWQILSLQISLEDSFHSLALDSGKPCVILCDRGVMDGSAYMTPEQWEILKLEHDLDTVTLRDTRYIAIFHLVTAAHGAEKFYSLENNGIRIESIEEARAIDKRTCRAWIGHPKLYVFDNSTTFEGKMQRLVDTAARLCGIPSTVKASRKYLLAKAP---VVIPFHHEDFEVEKVYLK--------------------PEAAKSSNDYSFVRCRS-QYGIPAYGMTTVRYLDTGDVVHLKRVLSAREYSFAIKHRSDPTRNVIKQQRMCFLYENQSFQIHVYKEPADLVGLSILHVQASCKNDQDIVMPLFLNIEK 385          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10062.137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR71_9PHAE1.800e-14561.54AAA_28 domain-containing protein n=2 Tax=Ectocarpu... [more]
I2CP47_NANGC8.130e-8144.25AAA_28 domain-containing protein (Fragment) n=2 Ta... [more]
A0A4D9CZL1_9STRA1.030e-8044.54Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2W782_9STRA9.950e-6641.64Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1Z5JYV0_FISSO2.060e-6538.46AAA_28 domain-containing protein n=2 Tax=Fistulife... [more]
A0A7S2R796_9STRA6.490e-6537.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K3WRS4_GLOUD1.410e-6438.90AAA_28 domain-containing protein n=1 Tax=Globispor... [more]
A0A7S2UL73_9STRA5.080e-6438.84Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A5D6YST2_9STRA7.210e-6338.44AAA_28 domain-containing protein n=1 Tax=Pythium b... [more]
A0A0P1A8H1_PLAHL2.280e-6238.33Isoform b n=1 Tax=Plasmopara halstedii TaxID=4781 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10062contigP-canaliculata_contig10062:2661..5528 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score447.6
Seed ortholog evalue5.3e-123
Seed eggNOG ortholog2880.D7G6Y3
Preferred nameunc-132
GOsGO:0000166,GO:0001882,GO:0001883,GO:0001894,GO:0001895,GO:0003674,GO:0005488,GO:0005525,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008289,GO:0009314,GO:0009416,GO:0009628,GO:0009987,GO:0017076,GO:0019001,GO:0032386,GO:0032388,GO:0032501,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0032880,GO:0033157,GO:0035091,GO:0035639,GO:0036094,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045494,GO:0048518,GO:0048871,GO:0050789,GO:0050896,GO:0051049,GO:0051050,GO:0051222,GO:0051223,GO:0051716,GO:0060249,GO:0060341,GO:0065007,GO:0065008,GO:0070201,GO:0070300,GO:0071214,GO:0071478,GO:0071482,GO:0090087,GO:0090316,GO:0097159,GO:0097367,GO:0104004,GO:1901265,GO:1901363,GO:1903827,GO:1903829,GO:1904951
EggNOG free text desc.AAA domain
EggNOG OGs28P3U@1,2QVQD@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size1029
Cds size1029
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815580.3067667-CDS-P-canaliculata_contig10062:2660..27731622815580.3067667-CDS-P-canaliculata_contig10062:2660..2773Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10062 2661..2773 +
1693494148.7137709-CDS-P-canaliculata_contig10062:2660..27731693494148.7137709-CDS-P-canaliculata_contig10062:2660..2773Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10062 2661..2773 +
1622815580.321174-CDS-P-canaliculata_contig10062:3120..32501622815580.321174-CDS-P-canaliculata_contig10062:3120..3250Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10062 3121..3250 +
1693494148.736158-CDS-P-canaliculata_contig10062:3120..32501693494148.736158-CDS-P-canaliculata_contig10062:3120..3250Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10062 3121..3250 +
1622815580.3356154-CDS-P-canaliculata_contig10062:3562..37121622815580.3356154-CDS-P-canaliculata_contig10062:3562..3712Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10062 3563..3712 +
1693494148.7484367-CDS-P-canaliculata_contig10062:3562..37121693494148.7484367-CDS-P-canaliculata_contig10062:3562..3712Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10062 3563..3712 +
1622815580.3485355-CDS-P-canaliculata_contig10062:3901..41231622815580.3485355-CDS-P-canaliculata_contig10062:3901..4123Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10062 3902..4123 +
1693494148.7570314-CDS-P-canaliculata_contig10062:3901..41231693494148.7570314-CDS-P-canaliculata_contig10062:3901..4123Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10062 3902..4123 +
1622815580.3593884-CDS-P-canaliculata_contig10062:4437..45701622815580.3593884-CDS-P-canaliculata_contig10062:4437..4570Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10062 4438..4570 +
1693494148.7648637-CDS-P-canaliculata_contig10062:4437..45701693494148.7648637-CDS-P-canaliculata_contig10062:4437..4570Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10062 4438..4570 +
1622815580.3734834-CDS-P-canaliculata_contig10062:4925..51611622815580.3734834-CDS-P-canaliculata_contig10062:4925..5161Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10062 4926..5161 +
1693494148.7729242-CDS-P-canaliculata_contig10062:4925..51611693494148.7729242-CDS-P-canaliculata_contig10062:4925..5161Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10062 4926..5161 +
1622815580.3862157-CDS-P-canaliculata_contig10062:5483..55281622815580.3862157-CDS-P-canaliculata_contig10062:5483..5528Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10062 5484..5528 +
1693494148.7815213-CDS-P-canaliculata_contig10062:5483..55281693494148.7815213-CDS-P-canaliculata_contig10062:5483..5528Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10062 5484..5528 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10062.137.1prot_P-canaliculata_contig10062.137.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig10062 2661..5528 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig10062.137.1

>prot_P-canaliculata_contig10062.137.1 ID=prot_P-canaliculata_contig10062.137.1|Name=mRNA_P-canaliculata_contig10062.137.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=343bp
FLVFTVPEAATSLFNNGVSLEALGGPATRFAFQWSILSLQMTLEDGFERV
ARASGQPSILFCDRGLMDGSVYMPADEWATLVKANGLDELKLRDGRYDAV
LHLVTAACGAEDHYSLDNNEARSEDAELARDVDKRTEAVWLGHPRHFIFD
NSTDFEPKLDRVATTVSKLVGLPCRPRKLGKFLLAQPPPPPEEFPVRAEA
FQVEKIFLQKKDVGENGGRAVEILPELDGPASCISSESFLEKRGRQGELG
LFLFETTTVSSYDDGTVAEVTRRLSAEEYEAIESQRRDQARQKVSQLRVS
FLWASQAFELQTDVKPAYGTSVLYRRSEGGELSLPPFLKVDE*
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mRNA from alignment at P-canaliculata_contig10062:2661..5528+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10062.137.1 ID=mRNA_P-canaliculata_contig10062.137.1|Name=mRNA_P-canaliculata_contig10062.137.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2868bp|location=Sequence derived from alignment at P-canaliculata_contig10062:2661..5528+ (Pelvetia canaliculata dioecious)
TTCCTCGTGTTCACGGTGCCGGAAGCTGCAACTTCCCTCTTCAACAACGG CGTTAGCCTCGAAGCCCTCGGAGGCCCAGCGACAAGATTCGCCTTCCAGT GGAGCATCCTCTCGTGAGACAAAACTTACTGCAATCTGTATTTTTACAGT TATACCTATGAATAGTGCAGTCGCCTACCAACCAGTATTAAACAGTAGGC AGTCCAACTTCCGGAATTGCTGCTTTCGTCGAATGTACGTATCGTGCACC ACCAACCGAAAAATGATTAAAAAGTTGCCATCGGTATTGAGACGTGGTAC GTGAGGGTATTTCGTCCACTTTGTATCGAGCTGTGCTCGTATCCGTGCAA CACTGCAGTTTTACCACTACACCATACGCATTCCCCACGTGCTAATAGAC GGAAACGATAAGACCCTGCTTTCCCGTGCACGTGCTACTCCTGTCAATTC CCTAACATAGCCTGCAGATGACGCTCGAGGATGGATTCGAGCGGGTTGCT CGGGCGTCCGGGCAGCCTTCGATCCTCTTTTGTGACAGAGGCCTCATGGA CGGTTCGGTGTACATGCCTGCCGACGAATGGGCTACATTGGTAGGGCTTA TCATTCCTCATGTTCTGTAGCTCTAAGATAGTAGGATGGAATAGGGTGAA ATGTGGTGGAATCCACGTGGAGCGACATGTTCCGTGTACCCAGCTGATAG CCGTTGCAGGATAACGTGCGCAGCTCTGCTGCTGTAGGACTACTGTACCA GCTGTCTGTTGACATTGTTGATTACTGCAGGGGCCATAGCGAACGCTCGA TCGAACAGCAGTGAACGCCTTAACCGCGCTCTTGACTGTACTATTACCAA TACTGGGTGGTAAGGATGTAAAAATGTATGGCGGTTTACATCTATCCTTC AGGTGAAAGCGAACGGCTTGGATGAGCTGAAACTTCGCGACGGTCGTTAC GACGCAGTCTTGCATCTCGTGACCGCGGCATGCGGGGCGGAGGATCATTA CTCCCTCGACAACAACGAGGCACGCAGCGAGGACGCCGAACTAGCCAGAG ATGTGCGTGTTCTTCAGCTTTGCTGTGACATAAAAATAAATAAATAGCGA AGTCATACTCGACTTCGACCCACCTTGGTCTTACAAGGCGCCACGTCCGC CCATGCCACTCGGCTCCTTGTGACGGCACTCCGCTAATTGATTATTTCGC TTTGGTCTCTCATGTGACACACGATGAACGAGGAACGAAAGGTGGACAAG AGGACGGAGGCGGTGTGGTTAGGACACCCTCGGCACTTCATATTTGACAA CTCTACGGACTTCGAGCCTAAGTTGGACCGAGTGGCGACCACTGTGTCAA AGCTTGTAGGTCTGCCGTGCCGCCCTCGAAAGCTGGGAAAGTTCCTCCTC GCTCAACCCCCACCCCCGCCGGAGGAGTTCCCAGTGCGAGCGGAAGCATT TCAGGTCGAGAAAGTGAGCACGTGGTGCGTCCGACGTGTATGTAGCACGA GTTGTTGGCATGAGCTTGTCAGGTTCGTGGTGGGCCCGTTACCATCGCGC AGAAGACCATAAAAACCTGAAACTGTGGAAGGAGCCACTCTATAACTCTA TAAGGCAGGTTCAGACTGGCTCTGTAGTCATCGACATGGCGACGAACTCT CACATCGCATCGTTTTTTAGTCTCTTTTCTAGGGCATTTTTTTTGTCTAT TTTGATGAGTAAAAGTTCCTTCGTTGTGTCTGGCTCGATGTCGAAGGCGA ATACTGCGTCGGTTGCCCTCGTCGCAGATCTTTCTACAGAAGAAAGACGT GGGGGAAAACGGAGGCAGGGCCGTGGAAATTCTACCGGAACTCGATGGTC CTGCCTCGTGCATCTCTAGCGAGTCTTTCCTGGAAAAGAGGGGTAGGCAA GGTGAGCTGGGTCGAAGTGATAAGCATGTAGCGAGAAAACTCAATCATGC CTTGGGTGTTGTTTTCGTCTGATTCTAATTCCACGGCGGAAATTGCCTCC GTTGCGAAGACTTGACGCAGCGTCGGCTTGGACAAAAGTGATAGAGGTGT AATCCGGCGTGACCCATTGGGGACAGGACAGTCGCAGCGTGGCCCGCTCG AAGGAAGTCCATCAGCAGATAGCTAGGACACTCAAGCAGCTTCTTTTACT ATACTATCAATAATTGACACCTTATACTTTGGTTTTTAGGACATTGATAT TTGTATGCATCGCGTGGGCTGTTTTTCCCTTGTTGCGTGCCTTTTTTACG AATATGAATACGAAGGACTATTTCTGTTCGAGACCACCACGGTATCCAGC TATGACGACGGCACAGTGGCGGAAGTTACACGACGACTTTCGGCGGAAGA GTACGAGGCCATCGAATCGCAGAGGAGGGATCAAGCGAGGCAAAAGGTTT CCCAACTTAGGGTATCGTTCTTGTGGGCAAGCCAAGCCTTCGAGCTACAG ACGGACGTGAAGCCGGCGTATGGAACCAGCGTCTTGTACCGACGATCAGA GGTGAGGCGCGGGGTCGAGCGCCTCGACGTACATTTTATAGAAAGTCGTC ATCCTGTACATCCGTCCATCGGCTATGTTGCTACATCATATTGCTTTTGT CAAAAAGGAAAGGAAAGAACGCCAAGCAGTGTGCTGACTTGGACGAAACT TTATGAGCTGGTCCATACAGGACATAGCCTGAAGCTTCATGTCAGGATCG TATTAAAGTAGTGTTGCTGTTGAACATGCCTCGAGCGGAAAAGGAGCGAC TGACGCGATTCGCACTCTCCAAACACTCCCCTGACGCCTTTTCTTCGCGC GCACGATGCTCTGGTATGATTAGGGCGGGGAGCTTTCGTTGCCGCCTTTT TTGAAGGTGGACGAGTGA
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Coding sequence (CDS) from alignment at P-canaliculata_contig10062:2661..5528+

>mRNA_P-canaliculata_contig10062.137.1 ID=mRNA_P-canaliculata_contig10062.137.1|Name=mRNA_P-canaliculata_contig10062.137.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2058bp|location=Sequence derived from alignment at P-canaliculata_contig10062:2661..5528+ (Pelvetia canaliculata dioecious)
TTCCTCGTGTTCACGGTGCCGGAAGCTGCAACTTCCCTCTTCAACAACGG
CGTTAGCCTCGAAGCCCTCGGAGGCCCAGCGACAAGATTCGCCTTCCAGT
GGAGCATCCTCTCTTCCTCGTGTTCACGGTGCCGGAAGCTGCAACTTCCC
TCTTCAACAACGGCGTTAGCCTCGAAGCCCTCGGAGGCCCAGCGACAAGA
TTCGCCTTCCAGTGGAGCATCCTCTCCCTGCAGATGACGCTCGAGGATGG
ATTCGAGCGGGTTGCTCGGGCGTCCGGGCAGCCTTCGATCCTCTTTTGTG
ACAGAGGCCTCATGGACGGTTCGGTGTACATGCCTGCCGACGAATGGGCT
ACATTGCCTGCAGATGACGCTCGAGGATGGATTCGAGCGGGTTGCTCGGG
CGTCCGGGCAGCCTTCGATCCTCTTTTGTGACAGAGGCCTCATGGACGGT
TCGGTGTACATGCCTGCCGACGAATGGGCTACATTGGTGAAAGCGAACGG
CTTGGATGAGCTGAAACTTCGCGACGGTCGTTACGACGCAGTCTTGCATC
TCGTGACCGCGGCATGCGGGGCGGAGGATCATTACTCCCTCGACAACAAC
GAGGCACGCAGCGAGGACGCCGAACTAGCCAGAGATGTGAAAGCGAACGG
CTTGGATGAGCTGAAACTTCGCGACGGTCGTTACGACGCAGTCTTGCATC
TCGTGACCGCGGCATGCGGGGCGGAGGATCATTACTCCCTCGACAACAAC
GAGGCACGCAGCGAGGACGCCGAACTAGCCAGAGATGTGGACAAGAGGAC
GGAGGCGGTGTGGTTAGGACACCCTCGGCACTTCATATTTGACAACTCTA
CGGACTTCGAGCCTAAGTTGGACCGAGTGGCGACCACTGTGTCAAAGCTT
GTAGGTCTGCCGTGCCGCCCTCGAAAGCTGGGAAAGTTCCTCCTCGCTCA
ACCCCCACCCCCGCCGGAGGAGTTCCCAGTGCGAGCGGAAGCATTTCAGG
TCGAGAAAGTGGACAAGAGGACGGAGGCGGTGTGGTTAGGACACCCTCGG
CACTTCATATTTGACAACTCTACGGACTTCGAGCCTAAGTTGGACCGAGT
GGCGACCACTGTGTCAAAGCTTGTAGGTCTGCCGTGCCGCCCTCGAAAGC
TGGGAAAGTTCCTCCTCGCTCAACCCCCACCCCCGCCGGAGGAGTTCCCA
GTGCGAGCGGAAGCATTTCAGGTCGAGAAAATCTTTCTACAGAAGAAAGA
CGTGGGGGAAAACGGAGGCAGGGCCGTGGAAATTCTACCGGAACTCGATG
GTCCTGCCTCGTGCATCTCTAGCGAGTCTTTCCTGGAAAAGAGGGGTAGG
CAAGGTGAGCTGGATCTTTCTACAGAAGAAAGACGTGGGGGAAAACGGAG
GCAGGGCCGTGGAAATTCTACCGGAACTCGATGGTCCTGCCTCGTGCATC
TCTAGCGAGTCTTTCCTGGAAAAGAGGGGTAGGCAAGGTGAGCTGGGACT
ATTTCTGTTCGAGACCACCACGGTATCCAGCTATGACGACGGCACAGTGG
CGGAAGTTACACGACGACTTTCGGCGGAAGAGTACGAGGCCATCGAATCG
CAGAGGAGGGATCAAGCGAGGCAAAAGGTTTCCCAACTTAGGGTATCGTT
CTTGTGGGCAAGCCAAGCCTTCGAGCTACAGACGGACGTGAAGCCGGCGT
ATGGAACCAGCGTCTTGTACCGACGATCAGAGGACTATTTCTGTTCGAGA
CCACCACGGTATCCAGCTATGACGACGGCACAGTGGCGGAAGTTACACGA
CGACTTTCGGCGGAAGAGTACGAGGCCATCGAATCGCAGAGGAGGGATCA
AGCGAGGCAAAAGGTTTCCCAACTTAGGGTATCGTTCTTGTGGGCAAGCC
AAGCCTTCGAGCTACAGACGGACGTGAAGCCGGCGTATGGAACCAGCGTC
TTGTACCGACGATCAGAGGGCGGGGAGCTTTCGTTGCCGCCTTTTTTGAA
GGTGGACGAGTGAGGCGGGGAGCTTTCGTTGCCGCCTTTTTTGAAGGTGG
ACGAGTGA
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