mRNA_P-canaliculata_contig100580.122.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig100580.122.1
Unique NamemRNA_P-canaliculata_contig100580.122.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: UPI000423FC16 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI000423FC16)

HSP 1 Score: 556 bits (1433), Expect = 1.930e-194
Identity = 280/341 (82.11%), Postives = 318/341 (93.26%), Query Frame = 1
Query:    1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAANFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAET 1023
            EGD VRRGQRLYSIYTP+ IAAQKDYLAS+QIGNERRIASVRQRL SKGMQESL+ERLTETRE+IER+PVYAE++GVVT+LMVRDGDYLKPGDP+++LQAY+KVWVIASVPESDLP M IGKTA L FESAPDAA  G++DYIYPTID KTRTA+VRISVDN+SGSLRPGAYADI+FEA+ ++TP+T+LSVPSQA+LRDSRGAHVILALG+GRF++RDI IGSS+ GRT+VLSGL+ G+RIVASGQFMLDSESNLREGFSKL+AP A FD +TPLSELPID +TLSQIDHMVD+ALYFHEALIDGYAIDPYFLDP LTLI+ L+ RF GSKL+PIL+ AET
Sbjct:  153 EGDIVRRGQRLYSIYTPDLIAAQKDYLASVQIGNERRIASVRQRLKSKGMQESLIERLTETREVIERMPVYAETAGVVTELMVRDGDYLKPGDPVVKLQAYDKVWVIASVPESDLPSMTIGKTATLTFESAPDAATIGEVDYIYPTIDTKTRTAQVRISVDNSSGSLRPGAYADILFEAEPSETPSTKLSVPSQAVLRDSRGAHVILALGDGRFEARDIKIGSSVSGRTQVLSGLSAGDRIVASGQFMLDSESNLREGFSKLNAPMAEFDGSTPLSELPIDAATLSQIDHMVDTALYFHEALIDGYAIDPYFLDPALTLIDGLRIRFEGSKLAPILDSAET 493          
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: A0A8J3CSU2_9PROT (Uncharacterized protein n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CSU2_9PROT)

HSP 1 Score: 538 bits (1387), Expect = 5.730e-187
Identity = 278/341 (81.52%), Postives = 306/341 (89.74%), Query Frame = 1
Query:    1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTP-TTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAANFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAE 1020
            EGD VRRGQRLYSIYTPE IAAQKDYLASLQIGN RRIASVRQRL+SKGMQ +LV+RLTETREL+E VP+YAES+GVVT LMVRDGDYLKPGD +++LQAY+KVWVIASVPESDLP M IG TA LKFESAPDAA++G +DYIYPTID+KTRTARVRISVDN SGSLRPGAYADI FEA  ++TP TTQLSVPSQA+LRDSRGAHVI+ALGEGRF+ R I IG+SIGGRTEVL GL  GERIVASGQFMLDSE+NLREG SKLS P + FD +T LS+LPIDG TLSQIDHMVD+ALYFHEALIDGY+IDP FLDPTLTLIENLK RF GS+L PIL+ AE
Sbjct:  186 EGDIVRRGQRLYSIYTPELIAAQKDYLASLQIGNARRIASVRQRLLSKGMQTNLVDRLTETRELVETVPIYAESAGVVTALMVRDGDYLKPGDAVMELQAYDKVWVIASVPESDLPAMRIGNTAQLKFESAPDAARTGTVDYIYPTIDVKTRTARVRISVDNVSGSLRPGAYADITFEAGLSETPPTTQLSVPSQAVLRDSRGAHVIIALGEGRFEPRAIEIGTSIGGRTEVLLGLKSGERIVASGQFMLDSEANLREGLSKLSEPTSGFDSSTALSDLPIDGGTLSQIDHMVDTALYFHEALIDGYSIDPSFLDPTLTLIENLKIRFTGSRLMPILDAAE 526          
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: UPI00036D76B3 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI00036D76B3)

HSP 1 Score: 535 bits (1378), Expect = 1.280e-185
Identity = 269/341 (78.89%), Postives = 308/341 (90.32%), Query Frame = 1
Query:    1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAANFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAET 1023
            EGD VRRGQRLY IYTPE IAAQKDYLASLQIGN RRIASVRQRL SKGMQE L++RLT +RE+IER+PVYAES+GVVT+LMVRDGDYLKPGDP+++LQ+Y KVWVIASVPES+LP++ IG+ A+LKFESAPDA K+G +DYIYPTID  TRTA+VRISV+NASGSLRPGAY DIVFE  +T  P++QL VPSQAILRDSRGAHVI+ALG+GRF+SR ITIGSSI GRTE+LSGL  GERIV+SGQFMLDSES+LREG SKLSAPAANFD  TPLS+LPIDG TLS+IDH+VD+ALYFHEA+IDGYAIDPYFLDPTL LI+ LK RF+GS+LSPIL+ + T
Sbjct:  190 EGDIVRRGQRLYRIYTPELIAAQKDYLASLQIGNARRIASVRQRLKSKGMQEGLIDRLTTSREVIERMPVYAESAGVVTELMVRDGDYLKPGDPVMKLQSYTKVWVIASVPESELPQIQIGEAASLKFESAPDAPKTGTVDYIYPTIDSNTRTAKVRISVENASGSLRPGAYVDIVFETQQTDAPSSQLVVPSQAILRDSRGAHVIMALGDGRFESRHITIGSSIRGRTEILSGLTAGERIVSSGQFMLDSESSLREGLSKLSAPAANFDAATPLSQLPIDGQTLSEIDHIVDTALYFHEAIIDGYAIDPYFLDPTLALIDTLKDRFSGSRLSPILDASAT 530          
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: C6XPA5_HIRBI (Efflux transporter, RND family, MFP subunit n=2 Tax=Hyphomonadaceae TaxID=69657 RepID=C6XPA5_HIRBI)

HSP 1 Score: 413 bits (1062), Expect = 8.540e-138
Identity = 216/342 (63.16%), Postives = 262/342 (76.61%), Query Frame = 1
Query:    1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAA-NFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAET 1023
            EGD+VR G  LY +Y+PE IAAQKDY+ASL IGNE RIA+VRQRL S GMQ  ++ R++ETRE++ERVPVYAE+ G V +L VR+GDY+KPG PIL+LQ+Y  VW+IAS+PE DL  +  G    L F SAPDA+ +G++DYIYPTI+ KTRT  VRI +DN+ G LRPGAYADI F+       T +L+VP++AILRDSRGAHVI+ALGEGRF  R + IG S  G TE+LSGL  GE++VASGQFMLDSE NLREGFSKL AP A      TPLS+LP+D +TL++IDH  D ALYFHEAL D Y IDPYF+DP L L E L+ RFA +KL+ ILE AET
Sbjct:  179 EGDTVRPGALLYRVYSPELIAAQKDYIASLAIGNENRIAAVRQRLRSIGMQNVIINRISETREVLERVPVYAEAGGTVDKLQVREGDYIKPGTPILKLQSYADVWIIASIPEQDLALIDTGMPVLLDFLSAPDASATGRVDYIYPTINSKTRTGDVRIEIDNSKGYLRPGAYADIRFDLGGD---TPRLAVPTEAILRDSRGAHVIMALGEGRFAGRAVRIGISANGLTEILSGLVSGEQVVASGQFMLDSEVNLREGFSKLQAPPAFAAGPETPLSQLPVDTTTLAEIDHFTDMALYFHEALTDRYKIDPYFVDPALRLGETLRTRFADTKLADILESAET 517          
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: A0A059E1C9_9PROT (RND transporter n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A059E1C9_9PROT)

HSP 1 Score: 411 bits (1056), Expect = 2.160e-137
Identity = 217/342 (63.45%), Postives = 261/342 (76.32%), Query Frame = 1
Query:    1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAA-NFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAET 1023
            EGD+VR G  LY +Y+PE IAAQKDY+ASL IGNE RIA+VRQRL S GMQ + + RL+ETRE++ERVPVYAE+ G V +L VR+GDY+KPG PILQLQ+Y  VWVIAS+PE DL  +  G   +L F SAPDAA +G++DYIYPTI+ +TRT  VRI +DN+ G LRPGAYADI F+        T+L+VP++AILRDSRGAHVI+ALG+GRF  R +  G S  G TE+LSGL  GE++VASGQFMLDSE NLREGFSKL AP A      TPLS+LP+D +TL++IDH  D ALYFHEAL D Y IDPYF+DP L L E L+ RFA +KL  ILE AET
Sbjct:  142 EGDTVRPGALLYRVYSPELIAAQKDYVASLAIGNENRIAAVRQRLRSIGMQNAAISRLSETREVLERVPVYAEAGGTVDKLQVREGDYVKPGTPILQLQSYADVWVIASIPEQDLAFIDTGMPVSLDFPSAPDAAATGRVDYIYPTINSQTRTGDVRIEIDNSQGYLRPGAYADIRFDLGGE----TRLAVPTEAILRDSRGAHVIMALGDGRFAGRAVRTGVSANGLTEILSGLVPGEQVVASGQFMLDSEVNLREGFSKLQAPPAFAAGPDTPLSQLPVDATTLAEIDHFTDMALYFHEALTDRYKIDPYFVDPALGLGETLRTRFADTKLVGILEPAET 479          
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: A0A6L7XJV0_9PROT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6L7XJV0_9PROT)

HSP 1 Score: 409 bits (1051), Expect = 3.220e-137
Identity = 213/341 (62.46%), Postives = 263/341 (77.13%), Query Frame = 1
Query:    1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAANF-DETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAE 1020
            EGDSVR G+ LY +Y+PE IAAQKDYLASLQIGNE RIA+VRQRL S GMQ + +ERLTETRE+IERVPVYAE++G V++L VR+GDY+KPG P+L+LQ+Y  VWVIAS+PE++L  +  G    L F SAP A   G++DYIYPTID  TRTA VRI VDN++G LRPGAYAD+ F  D  +    +LSVPS+AILRDSRGAHVI++LG GRF  R +  G S  GRT VL+GLA GE +V SGQFMLDSE +LR G ++L AP A      TPLSELP+D +TL++IDH+VD ALYFHEAL+D Y IDPYF+DP L + ++LK RF  ++L PI+E A+
Sbjct:   95 EGDSVRVGELLYRVYSPELIAAQKDYLASLQIGNENRIAAVRQRLRSVGMQPAAIERLTETREVIERVPVYAEATGTVSRLDVREGDYVKPGTPVLRLQSYADVWVIASIPEAELSSIEHGLAVFLSFPSAPQAPAEGRVDYIYPTIDPHTRTADVRIVVDNSAGHLRPGAYADVRFLLDAGKV---RLSVPSEAILRDSRGAHVIVSLGGGRFAGRAVDTGQSANGRTAVLTGLATGEEVVTSGQFMLDSEVSLRGGLARLEAPPAMLAGPDTPLSELPVDATTLAEIDHLVDMALYFHEALVDDYRIDPYFVDPALQISDSLKVRFGNTRLVPIIENAQ 432          
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: A0A3B9KYB9_9PROT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Hyphomonas atlantica TaxID=1280948 RepID=A0A3B9KYB9_9PROT)

HSP 1 Score: 410 bits (1055), Expect = 3.250e-137
Identity = 216/342 (63.16%), Postives = 261/342 (76.32%), Query Frame = 1
Query:    1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAA-NFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAET 1023
            EGD+VR G  LY +Y+P+ IAAQKDYL SL+IGNE RI++VRQRL S GMQ + V+RLT+ RE+IERVPVYAE+ G V +L VR+GDY+ PG PIL+LQ+Y+ VWV+AS+PE+DLP +  G    L F SAP+A   G +DYIYPTID  TRTA+VRI VDNA+G LRPGAYADI  +    +    +LSVP++AILRDSRGAHVI+ALGEGRF  R +  G S  GRTE+++GL  GE++VASGQFMLDSE NLREGFSKL AP A      TPLS+LP+D STL++IDH  D ALYFHEAL D Y IDPYF+DP L L E L+ RFA +KL PILE  ET
Sbjct:  144 EGDTVRPGALLYRVYSPDLIAAQKDYLNSLEIGNETRISAVRQRLRSLGMQNAAVDRLTQNREVIERVPVYAEAGGTVAELQVREGDYVSPGTPILRLQSYSGVWVMASLPETDLPLIDTGMPVRLDFPSAPEAPAEGTVDYIYPTIDPATRTAQVRIEVDNAAGYLRPGAYADITMDLGGGE----RLSVPTEAILRDSRGAHVIVALGEGRFAGRAVRTGVSSNGRTEIIAGLTPGEQVVASGQFMLDSEVNLREGFSKLQAPPAIAAGPDTPLSQLPVDASTLAEIDHFTDMALYFHEALTDQYRIDPYFVDPALGLGETLRIRFADTKLVPILEDGET 481          
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: A0A2D7KHU3_9PROT (Efflux transporter periplasmic adaptor subunit n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2D7KHU3_9PROT)

HSP 1 Score: 410 bits (1053), Expect = 1.270e-136
Identity = 213/341 (62.46%), Postives = 260/341 (76.25%), Query Frame = 1
Query:    1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAA-NFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAE 1020
            EGD+VR G  LY +Y+P+ IA QKD +ASL IGNE RIA+VRQRL S GM E  V+RL ETRE++ER+PVYAE+ G V  L VR+GDY++PG PIL+LQ+Y  VWV+ASVPESDLP++  G    LKF SAP+A   G IDYIYPTID +TRTAR+RI VDNASG LRPGAYADI  +    +     LSVP++AILRDSRGAHVI+ALGEGRF  R +  G S  GRT+++ GL EGE +VASGQF+LDSE NLREG S+L +P+       TPLSELP+D +TL+QIDH  D ALYFHEAL DGY IDPYF+DP L L ++L+ +FA +KL PI+E+AE
Sbjct:  178 EGDTVRPGALLYRVYSPDLIATQKDLIASLTIGNEARIAAVRQRLRSLGMPERAVDRLVETREVVERIPVYAEAGGTVAALEVREGDYVRPGTPILRLQSYAGVWVMASVPESDLPRLDTGLPVQLKFPSAPEAPGEGVIDYIYPTIDPQTRTARMRIEVDNASGYLRPGAYADISMQLSSGEF----LSVPTEAILRDSRGAHVIVALGEGRFAGRAVRTGVSANGRTQIIEGLTEGEEVVASGQFLLDSEVNLREGLSRLQSPSTITAGPETPLSELPVDAATLAQIDHFTDMALYFHEALTDGYRIDPYFVDPALALGDSLRTQFADTKLVPIIEEAE 514          
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: A0A2D8ZUI8_9PROT (Efflux transporter periplasmic adaptor subunit n=2 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A2D8ZUI8_9PROT)

HSP 1 Score: 409 bits (1051), Expect = 3.770e-136
Identity = 217/342 (63.45%), Postives = 259/342 (75.73%), Query Frame = 1
Query:    1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAA-NFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAET 1023
            EGDSVR G  LY IY+PE IAAQKDY+A+L IGNE RIA+VRQRL S GMQ + ++RLTETRE+ ERVPVYAE+ G V  L VR+GDY+KPG PIL+LQ+Y  VWVIAS+PE DL  +  G   +L F SAP A   G++DYIYPTI+ KTRTA VRI +DN++G LRPGAYADI F+        T+L+VP++AILRDSRG HVI+ALG+GRF  R +  G S  G TE+LSGLA GE++VASGQFMLDSE NLREGFSKL AP A      TPLS+LP+D  TL++IDH  D ALYFHEA+ D Y IDPYF+DP L L E L+ RFAG+KL  +LE AET
Sbjct:  179 EGDSVRPGALLYRIYSPELIAAQKDYIAALTIGNENRIAAVRQRLRSIGMQNTTIDRLTETREVRERVPVYAEAGGTVDTLEVREGDYVKPGTPILRLQSYADVWVIASIPEQDLAFIDTGMPVSLDFPSAPKAPGEGRVDYIYPTINPKTRTADVRIEIDNSAGYLRPGAYADIGFDLGGE----TRLAVPTEAILRDSRGTHVIMALGDGRFAGRAVRTGVSANGLTEILSGLAPGEQVVASGQFMLDSEVNLREGFSKLQAPPAFTAGPDTPLSQLPVDAITLAEIDHFTDMALYFHEAMTDRYKIDPYFVDPALGLGEGLRSRFAGTKLIAVLEPAET 516          
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: A0A259M236_9PROT (Efflux transporter periplasmic adaptor subunit n=2 Tax=unclassified Hyphomonas TaxID=2630699 RepID=A0A259M236_9PROT)

HSP 1 Score: 405 bits (1041), Expect = 8.730e-135
Identity = 210/341 (61.58%), Postives = 258/341 (75.66%), Query Frame = 1
Query:    1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAA-NFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAE 1020
            EGD+VR G  LY +Y+P+ IAAQKD +ASL IGNE RIA+VRQRL S GM E  + RL ETRE++ERVPVYAE+ G V  L +R+GDY+KPG P+L+LQ+Y  VWV+ASVPESDLP++  G    L+F SAP+A   G IDYIYPTID +TRTARVRI VDN +G LRPGAYADI  +    +    +LSVP++AILRDSRGAHVI+ALG+GRF  R +  G S  GRT+++ GL +GE +VASGQF+LDSE NLREG +KL  P A      TPLSELP+D +TL+QIDH  D ALYFHEAL D Y IDPYF+DP L L E+L+ RFA +KL PI+++AE
Sbjct:  180 EGDTVRPGALLYLVYSPDLIAAQKDLIASLSIGNETRIAAVRQRLRSLGMPERAIHRLVETREVMERVPVYAEAGGTVAALEIREGDYVKPGTPVLRLQSYAGVWVMASVPESDLPRLDTGLPVRLEFPSAPEAPGEGTIDYIYPTIDPQTRTARVRIEVDNTAGFLRPGAYADISMQLSGGE----RLSVPTEAILRDSRGAHVIVALGDGRFAGRAVRTGVSSNGRTQIVEGLTQGEEVVASGQFLLDSEVNLREGLAKLQTPVAITAGPDTPLSELPVDATTLAQIDHFTDMALYFHEALTDAYGIDPYFVDPALALGESLRRRFADTKLVPIIDEAE 516          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000423FC161.930e-19482.11efflux RND transporter periplasmic adaptor subunit... [more]
A0A8J3CSU2_9PROT5.730e-18781.52Uncharacterized protein n=1 Tax=Algimonas arctica ... [more]
UPI00036D76B31.280e-18578.89efflux RND transporter periplasmic adaptor subunit... [more]
C6XPA5_HIRBI8.540e-13863.16Efflux transporter, RND family, MFP subunit n=2 Ta... [more]
A0A059E1C9_9PROT2.160e-13763.45RND transporter n=2 Tax=Proteobacteria TaxID=1224 ... [more]
A0A6L7XJV0_9PROT3.220e-13762.46Efflux RND transporter periplasmic adaptor subunit... [more]
A0A3B9KYB9_9PROT3.250e-13763.16Efflux RND transporter periplasmic adaptor subunit... [more]
A0A2D7KHU3_9PROT1.270e-13662.46Efflux transporter periplasmic adaptor subunit n=2... [more]
A0A2D8ZUI8_9PROT3.770e-13663.45Efflux transporter periplasmic adaptor subunit n=2... [more]
A0A259M236_9PROT8.730e-13561.58Efflux transporter periplasmic adaptor subunit n=2... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100580contigP-canaliculata_contig100580:4..1026 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score559.7
Seed ortholog evalue9.5e-157
Seed eggNOG ortholog1121948.AUAC01000003_gene2098
KEGG koko:K07798
KEGG TC2.A.6.1.4,8.A.1
KEGG Pathwayko02020,map02020
EggNOG free text desc.Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EggNOG OGs1MVAS@1224,2TTGG@28211,43WVF@69657,COG0845@1,COG0845@2
COG Functional cat.M
Best tax levelHyphomonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Hectar predicted targeting categoryother localisation
Exons1
Model size1023
Cds size1023
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815579.3174152-CDS-P-canaliculata_contig100580:3..10261622815579.3174152-CDS-P-canaliculata_contig100580:3..1026Pelvetia canaliculata dioeciousCDSP-canaliculata_contig100580 4..1026 -
1693494148.2376235-CDS-P-canaliculata_contig100580:3..10261693494148.2376235-CDS-P-canaliculata_contig100580:3..1026Pelvetia canaliculata dioeciousCDSP-canaliculata_contig100580 4..1026 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100580.122.1prot_P-canaliculata_contig100580.122.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig100580 4..1026 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig100580.122.1

>prot_P-canaliculata_contig100580.122.1 ID=prot_P-canaliculata_contig100580.122.1|Name=mRNA_P-canaliculata_contig100580.122.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=341bp
EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGM
QESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQA
YNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMK
TRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDS
RGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLD
SESNLREGFSKLSAPAANFDETTPLSELPIDGSTLSQIDHMVDSALYFHE
ALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAET
back to top

mRNA from alignment at P-canaliculata_contig100580:4..1026-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig100580.122.1 ID=mRNA_P-canaliculata_contig100580.122.1|Name=mRNA_P-canaliculata_contig100580.122.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1023bp|location=Sequence derived from alignment at P-canaliculata_contig100580:4..1026- (Pelvetia canaliculata dioecious)
GAAGGTGACAGCGTACGCCGCGGACAACGTCTTTATAGCATTTACACGCC TGAGCCTATTGCAGCCCAAAAGGACTATCTGGCCTCGCTTCAAATTGGCA ATGAGCGCCGCATCGCCTCCGTCCGCCAAAGGCTCATATCCAAAGGTATG CAAGAAAGCCTTGTGGAGCGCCTGACAGAGACCCGCGAGCTTATTGAGCG CGTGCCCGTCTATGCGGAAAGTTCCGGCGTTGTAACGCAGCTTATGGTGC GCGACGGCGACTACCTCAAACCCGGTGACCCGATCCTGCAATTACAGGCC TATAATAAGGTTTGGGTCATCGCCTCAGTTCCGGAATCTGATTTGCCGAA AATGGTAATAGGGAAGACAGCAGCTTTGAAATTTGAAAGCGCGCCTGATG CCGCAAAATCAGGCAAGATTGACTACATCTACCCCACCATCGATATGAAA ACGAGAACGGCTCGCGTCCGCATAAGTGTTGATAATGCGTCAGGCTCTTT ACGCCCCGGCGCTTATGCCGACATAGTATTTGAAGCAGATAAAACTCAAA CGCCGACAACACAGCTCTCTGTCCCAAGCCAAGCCATATTACGCGATTCA CGCGGCGCACATGTCATTCTCGCTTTAGGTGAAGGCCGATTTGACTCTCG CGATATTACGATTGGATCAAGTATTGGCGGCCGCACAGAGGTTTTATCAG GTCTTGCAGAAGGTGAGCGCATTGTCGCCAGTGGTCAGTTCATGCTCGAT TCCGAATCCAATCTACGCGAAGGGTTTTCAAAACTCAGCGCGCCTGCCGC CAATTTTGACGAAACCACGCCTTTATCCGAGCTTCCAATAGACGGCTCTA CGCTGAGCCAAATTGATCATATGGTTGATAGCGCGCTCTATTTCCATGAA GCCTTGATTGATGGCTATGCGATTGACCCTTACTTCCTAGATCCCACCCT CACATTGATTGAAAATCTAAAGGGCCGATTTGCAGGCTCCAAGCTGTCTC CGATTTTAGAAAAGGCTGAGACG
back to top

Coding sequence (CDS) from alignment at P-canaliculata_contig100580:4..1026-

>mRNA_P-canaliculata_contig100580.122.1 ID=mRNA_P-canaliculata_contig100580.122.1|Name=mRNA_P-canaliculata_contig100580.122.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2046bp|location=Sequence derived from alignment at P-canaliculata_contig100580:4..1026- (Pelvetia canaliculata dioecious)
GAAGGTGACAGCGTACGCCGCGGACAACGTCTTTATAGCATTTACACGCC
TGAGCCTATTGCAGCCCAAAAGGACTATCTGGCCTCGCTTCAAATTGGCA
ATGAGCGCCGCATCGCCTCCGTCCGCCAAAGGCTCATATCCAAAGGTATG
CAAGAAAGCCTTGTGGAGCGCCTGACAGAGACCCGCGAGCTTATTGAGCG
CGTGCCCGTCTATGCGGAAAGTTCCGGCGTTGTAACGCAGCTTATGGTGC
GCGACGGCGACTACCTCAAACCCGGTGACCCGATCCTGCAATTACAGGCC
TATAATAAGGTTTGGGTCATCGCCTCAGTTCCGGAATCTGATTTGCCGAA
AATGGTAATAGGGAAGACAGCAGCTTTGAAATTTGAAAGCGCGCCTGATG
CCGCAAAATCAGGCAAGATTGACTACATCTACCCCACCATCGATATGAAA
ACGAGAACGGCTCGCGTCCGCATAAGTGTTGATAATGCGTCAGGCTCTTT
ACGCCCCGGCGCTTATGCCGACATAGTATTTGAAGCAGATAAAACTCAAA
CGCCGACAACACAGCTCTCTGTCCCAAGCCAAGCCATATTACGCGATTCA
CGCGGCGCACATGTCATTCTCGCTTTAGGTGAAGGCCGATTTGACTCTCG
CGATATTACGATTGGATCAAGTATTGGCGGCCGCACAGAGGTTTTATCAG
GTCTTGCAGAAGGTGAGCGCATTGTCGCCAGTGGTCAGTTCATGCTCGAT
TCCGAATCCAATCTACGCGAAGGGTTTTCAAAACTCAGCGCGCCTGCCGC
CAATTTTGACGAAACCACGCCTTTATCCGAGCTTCCAATAGACGGCTCTA
CGCTGAGCCAAATTGATCATATGGTTGATAGCGCGCTCTATTTCCATGAA
GCCTTGATTGATGGCTATGCGATTGACCCTTACTTCCTAGATCCCACCCT
CACATTGATTGAAAATCTAAAGGGCCGATTTGCAGGCTCCAAGCTGTCTC
CGATTTTAGAAAAGGCTGAGACGGAAGGTGACAGCGTACGCCGCGGACAA
CGTCTTTATAGCATTTACACGCCTGAGCCTATTGCAGCCCAAAAGGACTA
TCTGGCCTCGCTTCAAATTGGCAATGAGCGCCGCATCGCCTCCGTCCGCC
AAAGGCTCATATCCAAAGGTATGCAAGAAAGCCTTGTGGAGCGCCTGACA
GAGACCCGCGAGCTTATTGAGCGCGTGCCCGTCTATGCGGAAAGTTCCGG
CGTTGTAACGCAGCTTATGGTGCGCGACGGCGACTACCTCAAACCCGGTG
ACCCGATCCTGCAATTACAGGCCTATAATAAGGTTTGGGTCATCGCCTCA
GTTCCGGAATCTGATTTGCCGAAAATGGTAATAGGGAAGACAGCAGCTTT
GAAATTTGAAAGCGCGCCTGATGCCGCAAAATCAGGCAAGATTGACTACA
TCTACCCCACCATCGATATGAAAACGAGAACGGCTCGCGTCCGCATAAGT
GTTGATAATGCGTCAGGCTCTTTACGCCCCGGCGCTTATGCCGACATAGT
ATTTGAAGCAGATAAAACTCAAACGCCGACAACACAGCTCTCTGTCCCAA
GCCAAGCCATATTACGCGATTCACGCGGCGCACATGTCATTCTCGCTTTA
GGTGAAGGCCGATTTGACTCTCGCGATATTACGATTGGATCAAGTATTGG
CGGCCGCACAGAGGTTTTATCAGGTCTTGCAGAAGGTGAGCGCATTGTCG
CCAGTGGTCAGTTCATGCTCGATTCCGAATCCAATCTACGCGAAGGGTTT
TCAAAACTCAGCGCGCCTGCCGCCAATTTTGACGAAACCACGCCTTTATC
CGAGCTTCCAATAGACGGCTCTACGCTGAGCCAAATTGATCATATGGTTG
ATAGCGCGCTCTATTTCCATGAAGCCTTGATTGATGGCTATGCGATTGAC
CCTTACTTCCTAGATCCCACCCTCACATTGATTGAAAATCTAAAGGGCCG
ATTTGCAGGCTCCAAGCTGTCTCCGATTTTAGAAAAGGCTGAGACG
back to top