prot_P-canaliculata_contig100563.121.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig100563.121.1
Unique Name	prot_P-canaliculata_contig100563.121.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	136

Homology

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BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match: A0A848V1M7_9PROT (GFA family protein n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V1M7_9PROT)

HSP 1 Score: 217 bits (553), Expect = 1.110e-70
Identity = 97/134 (72.39%), Postives = 114/134 (85.07%), Query Frame = 0

Query:    1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMP 134
            M  LTGNCLCGQVSF A+GDI M GNCHCTDCQQI+G+ FATL+F+ + ++KI GETKRFEHTVDSGNALTKDFCP CGSQMFGGNV RPG  A++ G INEK+ + PQFNV+ SSK PC++LDE+IP F+KMP
Sbjct:    1 MTILTGNCLCGQVSFEADGDITMMGNCHCTDCQQITGAGFATLVFMNENNVKISGETKRFEHTVDSGNALTKDFCPNCGSQMFGGNVLRPGSIALRLGSINEKEHVNPQFNVFCSSKAPCSILDESIPGFEKMP 134

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BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match: UPI000426690E (GFA family protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI000426690E)

HSP 1 Score: 211 bits (537), Expect = 2.270e-68
Identity = 94/135 (69.63%), Postives = 113/135 (83.70%), Query Frame = 0

Query:    1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 135
            MPKLTGNCLCG V F A+GDI MQGNCHCTDCQQ+SGSPFATL+F++ +++++ GE K F HTVDSGN LTK+FC  CGSQMF    GRPGM  ++AG INEK+ I+PQFNVY  SK+PCTL+D++IPAFDKMPG
Sbjct:    1 MPKLTGNCLCGAVRFEADGDIAMQGNCHCTDCQQVSGSPFATLVFMESDNVEVTGELKSFSHTVDSGNQLTKEFCTHCGSQMFA--KGRPGMIGLRAGSINEKEHIQPQFNVYAGSKLPCTLMDDDIPAFDKMPG 133

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BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match: UPI0016733560 (GFA family protein n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI0016733560)

HSP 1 Score: 193 bits (491), Expect = 2.470e-61
Identity = 87/135 (64.44%), Postives = 100/135 (74.07%), Query Frame = 0

Query:    1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 135
            M KLTGNCLCG V+FVA+GDI MQGNCHCTDC+Q  G  FATL+F+K  D+ I GE K F H VDSG+ LTK FCP CGSQ+F  N  RP    ++AG +NE  E+KPQFNVY  SK+ CT LD NIPAFD MPG
Sbjct:    1 MTKLTGNCLCGDVTFVADGDITMQGNCHCTDCRQSGGGAFATLVFMKVADVDISGEVKTFNHVVDSGSTLTKTFCPRCGSQLFTSNQARPESIGIRAGTLNEHQEVKPQFNVYAKSKMDCTHLDPNIPAFDGMPG 135

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BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match: A0A1I4DQ37_9RHOB (Uncharacterized conserved protein n=1 Tax=Shimia haliotis TaxID=1280847 RepID=A0A1I4DQ37_9RHOB)

HSP 1 Score: 176 bits (446), Expect = 1.760e-54
Identity = 78/135 (57.78%), Postives = 100/135 (74.07%), Query Frame = 0

Query:    1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 135
            MPKLTG CLCG++SF A+GD+ +  NCHCT C+Q +GS FATL+F+K +DIKI G  K FEH  D+G+ +TK FC TCG+ +F  N  R GM  ++AGVINE  E  P+ NVYVSSK+  T+L + IPAF+KMPG
Sbjct:    1 MPKLTGQCLCGEISFEADGDVPVMANCHCTACRQSTGSAFATLMFMKRDDIKITGTPKTFEHASDAGSTMTKHFCSTCGTPLFTQNSSREGMLGIRAGVINEPQEFTPKANVYVSSKMDATILQDGIPAFEKMPG 135

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BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match: A0A1M6M3K2_9RHOB (Uncharacterized conserved protein n=2 Tax=Shimia gijangensis TaxID=1470563 RepID=A0A1M6M3K2_9RHOB)

HSP 1 Score: 170 bits (431), Expect = 1.080e-51
Identity = 74/135 (54.81%), Postives = 99/135 (73.33%), Query Frame = 0

Query:    1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 135
            M KLTG CLCG +SF A+G++ +  NCHCT C+Q +G+ FATL+F+K +D+KI G  K F+H  D+G+ +TK FC  CG+ MF  N  R GM  ++AGVINE +E  P+ NVYVSSK+  T+LD+ IPAF+KMPG
Sbjct:   38 MTKLTGQCLCGDISFEADGEVPVMANCHCTHCRQSTGAAFATLMFMKQDDVKITGTPKTFQHKSDAGSTMTKHFCGNCGTPMFTQNSSREGMLGLRAGVINEHEEFTPKVNVYVSSKMKATILDDGIPAFEKMPG 172

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BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match: UPI001CBDC56D (GFA family protein n=1 Tax=Tateyamaria pelophila TaxID=328415 RepID=UPI001CBDC56D)

HSP 1 Score: 169 bits (427), Expect = 1.370e-51
Identity = 74/135 (54.81%), Postives = 98/135 (72.59%), Query Frame = 0

Query:    1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 135
            M KLTG CLCG++SF A+GD+ +  NCHCT C+Q +GS +ATL+F+K  D+KI G  K ++H  D+GN +TK FC TCG+ +F  N  R GM  ++AGVINE  E  P+ NVY SSK+  T+LD+ IPAF+KMPG
Sbjct:    1 MTKLTGKCLCGEISFEADGDVPVMANCHCTACRQSTGSAYATLMFMKQGDVKITGTPKTYQHKSDAGNTMTKHFCGTCGTPLFTQNSAREGMLGLRAGVINEDAEFAPKVNVYTSSKMKATVLDDGIPAFEKMPG 135

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BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match: A0A0M9EKH1_9RHOB (Putative glutathione-dependent formaldehyde-activating enzyme n=1 Tax=Shimia sp. SK013 TaxID=1389006 RepID=A0A0M9EKH1_9RHOB)

HSP 1 Score: 168 bits (425), Expect = 2.760e-51
Identity = 72/135 (53.33%), Postives = 98/135 (72.59%), Query Frame = 0

Query:    1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 135
            M KLTG CLCG++SF A+GD+ +  NCHCT C+Q +GS FATL+F+K  D+ + G  K ++H+ D+GN +TK FC TCG+ MF  N  R GM  ++AG+INE  E  P+ NVY SSK+  T+LD+ +PAF+KMPG
Sbjct:    1 MTKLTGQCLCGEISFDADGDVPVMANCHCTACRQSTGSAFATLMFMKQTDVNVTGTPKTYQHSSDTGNTMTKSFCGTCGTPMFTQNSAREGMLGLRAGLINEHQEFTPKVNVYTSSKMQATVLDDALPAFEKMPG 135

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BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match: A0A0P1I5G9_9RHOB (Glutathione-dependent formaldehyde-activating enzyme n=2 Tax=Shimia thalassica TaxID=1715693 RepID=A0A0P1I5G9_9RHOB)

HSP 1 Score: 167 bits (422), Expect = 7.900e-51
Identity = 74/135 (54.81%), Postives = 100/135 (74.07%), Query Frame = 0

Query:    1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 135
            M KLTG CLCG VSF A+G++ +  NCHCT C+Q +GS FATL+F+K+ D+KI G  K F+H  D+G+ +TK FC  CG+ +F  N  R GM  ++AGVI+E++E  P+ NVYVSSK+  TLLD+ +PAF+KMPG
Sbjct:    1 MTKLTGECLCGAVSFEADGEVPVMANCHCTACRQSTGSAFATLMFMKEGDVKITGTPKTFQHNSDAGSVMTKHFCDKCGTPLFTQNSTREGMLGLRAGVIHEQEEFAPKVNVYVSSKMKATLLDDALPAFEKMPG 135

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BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match: UPI0018D6A266 (GFA family protein n=2 Tax=Thiosulfatihalobacter marinus TaxID=2792481 RepID=UPI0018D6A266)

HSP 1 Score: 166 bits (421), Expect = 5.700e-50
Identity = 72/133 (54.14%), Postives = 98/133 (73.68%), Query Frame = 0

Query:    3 KLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 135
            +LTG CLCG++SF A+GD+ +  NCHCT C+  +GS FATL+F+K+ D+KI G  K F+H  D+G  +TK FC TCG+ MF  N  R GM  ++AG +NE +E  P+ NVYVSS++  TLLD++IPAF+KMPG
Sbjct:   55 RLTGQCLCGEISFEADGDVPVMANCHCTACRHSTGSAFATLMFMKEGDVKITGTPKTFQHKSDAGTTMTKHFCDTCGTPMFTQNSAREGMLGLRAGNVNEHEEFTPKANVYVSSRMKATLLDDSIPAFEKMPG 187

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BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match: A0A345QPE6_9RHOB (Aldehyde-activating protein n=2 Tax=Sulfitobacter sp. SK012 TaxID=1389005 RepID=A0A345QPE6_9RHOB)

HSP 1 Score: 164 bits (416), Expect = 8.590e-50
Identity = 68/135 (50.37%), Postives = 100/135 (74.07%), Query Frame = 0

Query:    1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 135
            M KLTGNCLCG +SF A+G++ +  NCHCT C+Q +GS +ATL+F+K +D+K+ G  K ++H+ D+G  +TK FC  CG+ +F  N  R GM  ++AG+INE++E  P+ NVY SSK+  T+L++ +PAF+KMPG
Sbjct:   10 MTKLTGNCLCGDISFEADGEVPVMANCHCTACRQSTGSAYATLMFMKHDDVKVTGTPKTYQHSSDAGTVMTKHFCGNCGTPLFTQNSAREGMLGLRAGLINEQEEFAPKVNVYTSSKLNATVLEDGLPAFEKMPG 144

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A848V1M7_9PROT	1.110e-70	72.39	GFA family protein n=1 Tax=Hellea sp. TaxID=271569...	[more]
UPI000426690E	2.270e-68	69.63	GFA family protein n=1 Tax=Hellea balneolensis Tax...	[more]
UPI0016733560	2.470e-61	64.44	GFA family protein n=1 Tax=Litorimonas cladophorae...	[more]
A0A1I4DQ37_9RHOB	1.760e-54	57.78	Uncharacterized conserved protein n=1 Tax=Shimia h...	[more]
A0A1M6M3K2_9RHOB	1.080e-51	54.81	Uncharacterized conserved protein n=2 Tax=Shimia g...	[more]
UPI001CBDC56D	1.370e-51	54.81	GFA family protein n=1 Tax=Tateyamaria pelophila T...	[more]
A0A0M9EKH1_9RHOB	2.760e-51	53.33	Putative glutathione-dependent formaldehyde-activa...	[more]
A0A0P1I5G9_9RHOB	7.900e-51	54.81	Glutathione-dependent formaldehyde-activating enzy...	[more]
UPI0018D6A266	5.700e-50	54.14	GFA family protein n=2 Tax=Thiosulfatihalobacter m...	[more]
A0A345QPE6_9RHOB	8.590e-50	50.37	Aldehyde-activating protein n=2 Tax=Sulfitobacter ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.1590.10		coord: 2..127 e-value: 5.1E-17 score: 64.0
None	No IPR available	PANTHER	PTHR33337	FAMILY NOT NAMED	coord: 2..133
IPR006913	Glutathione-dependent formaldehyde-activating enzyme/centromere protein V	PFAM	PF04828	GFA	coord: 26..115 e-value: 2.8E-26 score: 91.7
IPR011057	Mss4-like superfamily	SUPERFAMILY	51316	Mss4-like	coord: 2..135

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig100563	contig	P-canaliculata_contig100563:250..657 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig100563.121.1	mRNA_P-canaliculata_contig100563.121.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig100563 250..657 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig100563.121.1 ID=prot_P-canaliculata_contig100563.121.1|Name=mRNA_P-canaliculata_contig100563.121.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=136bp
MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDED
IKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVI
NEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006913	GFA/CENP-V
IPR011057	Mss4-like_sf