prot_P-canaliculata_contig10752.997.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10752.997.1
Unique Nameprot_P-canaliculata_contig10752.997.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length320
Homology
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BLAST of mRNA_P-canaliculata_contig10752.997.1 vs. uniprot
Match: A0A6H5JCV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV2_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.330e-28
Identity = 87/208 (41.83%), Postives = 104/208 (50.00%), Query Frame = 0 
Query:   72 RDGGARQAGSGSVRGSNALDVDVAGGGSDSWEGAARGGRTRAIREDTVVVVTEGELGGNGGNQRTLLQKRVGEFDGTEGEDIIPPWVAACVIHSEFRPREQTKVAFFLGPWAPAHQ-----MAPPSTSQQQQKQNTASRGS------------------------------------------GKSAPAGQQISQRFTAPAQMLVSKV 232
            R  G    G+G VRGS+ LD D  GG          GG  RAI +DT++ VTE +LGG+GG QRTLLQKRVGEFDG EG+D IP WV ACV+H EF  +EQ K+AFFL PW P  +     ++ PST  +Q +     RG                                           G       Q+SQRFTAP QMLVSKV
Sbjct:  954 RGSGESSGGAGGVRGSHVLDFDSVGG----------GGAGRAIGDDTMLWVTEMDLGGHGGIQRTLLQKRVGEFDGREGQDAIPNWVMACVLHGEFHTKEQDKMAFFLAPWIPPERGGGGGLSLPSTPHRQPQ---GKRGXXXXXXXXXDARKPASLXXXXXXXXXXXXXXXXXXXXXXXXXVGAGGVPSNQMSQRFTAPVQMLVSKV 1148
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10752.997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCV2_9PHAE2.330e-2841.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021772WDR48/Bun107PFAMPF11816DUF3337coord: 117..312
e-value: 7.2E-20
score: 71.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10752contigP-canaliculata_contig10752:6689..9150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10752.997.1mRNA_P-canaliculata_contig10752.997.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10752 6168..10701 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10752.997.1 ID=prot_P-canaliculata_contig10752.997.1|Name=mRNA_P-canaliculata_contig10752.997.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=320bp
MEQHLRSHSNHIRSCRQRGGNGSANGRNADNGSAYSSGESDSDDDSEQGE
GWEDESSLTSPVSGESSQASARDGGARQAGSGSVRGSNALDVDVAGGGSD
SWEGAARGGRTRAIREDTVVVVTEGELGGNGGNQRTLLQKRVGEFDGTEG
EDIIPPWVAACVIHSEFRPREQTKVAFFLGPWAPAHQMAPPSTSQQQQKQ
NTASRGSGKSAPAGQQISQRFTAPAQMLVSKVMVYVLRHSDLRQHLQSPG
AESLGGDADAEEDEGSGPEQFPQDLVEVLCGGRVLEPHLYIGAVQEHIWS
PKSSGTLFLHFRSPSPPEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021772WDR48/Bun107