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Homology
BLAST of mRNA_P-canaliculata_contig10630.848.1 vs. uniprot
Match: D8LF18_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF18_ECTSI) HSP 1 Score: 661 bits (1705), Expect = 2.660e-220 Identity = 406/785 (51.72%), Postives = 514/785 (65.48%), Query Frame = 3
Query: 111 EGSIAEKPLRRFQSLSASLEKLILSIAQDWENAAKVPL-DSTG----DGVSKPIHLKMRRAQLLFTELHSTARQTHSVIERLRSKVAVSKQSMDENHLQLENLLYERDYLSRETQLCKDFTMSELGKMEEDEEQGFLEDVDTLQTEEEHARNLRILTDQKDKRRRSQQELEHAQIRIKGVNAAISDSKQYLSKLPDHLKDVEKALVPLKKNMPWRPGARRGRHEQAADLPGPLFILYCQLEAYCDFVRDETACEEENTSLSLLSSSSLTSYE--DDQGVDAPAVSLTLASAKAHVSALAKAAAEGPNDSTASAIGDRRASPKVTSNDTLESCGPAAPKRARLLYQEQF---------EGDDKMMMMISKSEAGRLLLDALKPSSLEVVLTLNIANVDGNDSISGGRSKSRRTKNGGEAAGAVGKDATS----FAARFSYLPALGIVTVCPQAGFPPCLLVNLFPNDTGRNTPNPSNHHSQAARASASGIFEFPSDVPCRPYLWAQWLAGLHFPHAADVVGGYGAAAESGAIGGEREKGPIEPSTRAVMSALLSRLRTHASLAKQLRSFSS-KGLSPSTMLQDEVLETTGNIELRSWKELSSPELQQAAKTFAERDTSTAGDIEGTVPGGTAAPAGRQAWERYGARYFKGSFKIKKGRGNERVVEMLVEVPSEYPLRPSLISLAEN--------GNSSVQEELRMITNEVNSHYDTLLTEDVTSWDHLLSKQVSLVMECLVARPVGGFVRLRRGRMRRKPVMFDRLERTFVHR*-LSYPRTRSAVL 2375
E SIA KPL+RF+ L+ SLE LI S+AQDWE+ A P D+ G DG S +H KMR+AQLLFTELHST R+ HS IE +R+KVA +KQ+MD NHLQLENLLYERDYLSRETQLC+DFTM+EL KMEEDEEQGFLEDVDTLQT EEHA NL IL DQK++R +Q L+ QIR+K ++ + +S+ YL +LP++LKDVE+AL PLKKNMPWRPG+RRGRHE++++LPGPLF LYCQLEAYCD V T +E+ + S L++ + D+ A S+T+ AKA VSA AKAAA GP D+ +S KR RL +++ EG ++ IS+ EAG+ L+AL+PS LEV LT+N + R++ G AA +TS F RFS+ P+LG+V V P A LL NLFP DTG++TPNP+NHH++AA+AS G+FE+P+DVPCRPY WAQ LAGL FP AAD G A PIEP+TR+ ++AL SR RT A+L QL++ S KG SP +DEV+ T +ELRSWKELS E QQA+ TF E S +G G+ A + WER+GARYFKG+ IK GRG ER+V + VEVP+EYPLRPSLISL E+ G++++++EL + NEVN+HYDTLLTEDV WDHLLS Q+ LVMECL ++ G RLR+GRMRRKPV+F+ LER FV R L RT ++V+
Sbjct: 5 EDSIARKPLQRFKRLTGSLETLISSMAQDWEDLATAPAADAVGLLHDDGPS--VHGKMRKAQLLFTELHSTTRKIHSAIETIRNKVATAKQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEEDEEQGFLEDVDTLQTAEEHAGNLAILKDQKEQRINAQLALKATQIRVKAASSTVKESRDYLDRLPENLKDVERALAPLKKNMPWRPGSRRGRHERSSELPGPLFTLYCQLEAYCDSVLAATGGMDESGAFSPLATFGGDGGDVGGDRHPPGLAASVTIEPAKACVSASAKAAAAGPKDAXXXXXXXXXXXXXXXXXXXPDS------KRPRLDREQEDGEGGVAGGGEGRARLKRTISRREAGKATLEALRPSPLEVQLTINFGD--------------RKSDAGAAAAPPKASGSTSTAETFKVRFSFFPSLGVVAVRPAAHDGGALLANLFPADTGKDTPNPANHHNKAAQASPLGVFEYPADVPCRPYRWAQRLAGLRFPPAADGGGAVAATTM-----------PIEPTTRSAVAALRSRARTLAALGGQLKALSDGKGPSPLPGSRDEVV--TEGVELRSWKELSGSEQQQASTTFQENHASKSG---GSEEAEAACCRSLELWERFGARYFKGTLSIKHGRGKERIVHVQVEVPAEYPLRPSLISLTEDSKPDADAAGDAALRDELCTVANEVNAHYDTLLTEDVDRWDHLLSHQLLLVMECLASK-AGTLGRLRKGRMRRKPVVFEHLERKFVDRGSLLTARTDTSVI 750
BLAST of mRNA_P-canaliculata_contig10630.848.1 vs. uniprot
Match: A0A835YW19_9STRA (Fms-interacting protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW19_9STRA) HSP 1 Score: 160 bits (405), Expect = 8.090e-37 Identity = 195/756 (25.79%), Postives = 287/756 (37.96%), Query Frame = 3
Query: 351 VAVSKQSMDENHLQLENLLYERDYLSRETQLCKDFTMSELGKMEEDEEQGFLEDVDTLQTEEEHARNL-----------------------RILTDQKDKRRRSQQELEHAQIRIKGVNAAISDSKQYLSKLPDHLKDVEKALVPLKKNMPWRPGARRGRHEQAADLPGPLFILYCQLEAYCDFVRDETACEEENTSLSLLSSSSLTSYEDDQGVDAPAVSLTLASAKAHVSALAKAAAEGPNDSTASAIGDRRASPKVTSNDTLESCGPAAPKRARLLYQEQFEGDDKMMMMISKSEAGRLLLDALKPSSLEVVLTLNIANVDGNDSISGGRSKSRRTKNGGEAAGAVGKDATSFAARFSYLPALGIVTVCPQAGFPPCLLVNLFPNDTGRNTPNPSNHHSQAARASASGIFEFPSDVPCRPYLWAQWLAGLHFPHAADVVGGYGAAAESGAIGGEREKGPIEPSTRAVMSALLSRLRTHASLAKQLRSFSSKGL---SPSTMLQDEVLETTGNIELRSWKELSSPELQQAAKTF-------------------------------------------AERDTSTAGDIEGTVPGGTAAPAGRQAWERYGARYFKGSFKIKKGRGNERVVEMLVEVPSEYPLRPSLISLAENGNSS---------VQEELRMITNEVNSHYDTLLTEDVTSWDHLLSKQVSLVMECLVARPVGGF---------------VRLRRGRMRRKPVMFDRLERTFVHR 2339
V ++ +D HLQL+NLLYERD+L RE QLC+D +L KM DE L +D + + HA + +IL + R + ++L Q R + A++++ +++L+ LP L +E A PL+ M RR +AADLP PLF L+CQLEAY + ++N S++++ TS E+ +A+ H S P A+ SP LL D + ++ V L + + NGG AA A + RF Y+P L +V V G P +L LFP D G TPN NH AR A+G+FE+P+DVP RPY WAQWLAG HF + + P+EPSTRAV+ + +R+ + A+L QL+ + L +PS Q + +W+E++ A R ST ++ AA GR+A+ + +++ G G E V ++V +YPL L +G +L + EVN+H L+ DV +WD LL+ Q+ CL A GG VR RRGR R + +D L F+HR
Sbjct: 55 VVERRRELDGVHLQLQNLLYERDHLLREIQLCRDHPTPQLDKMARDEGAPILPSMDDAVSADAHANHQEHPSAARSPHAHMHXXXXXAAHSQILKGELTARDKMTRQLRELQERARAQAASVAEQQRWLAGLPRALAALEDASKPLQAYMRSGKSERRALQHRAADLPKPLFTLFCQLEAYAF-----SYGLKQNLSVTIVPEVQYTSGEE--------------AAQRHGS---------PRTPGATPTEPPAPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNDLITCAAGAVELRVG-------------------SGNGGSAA------APAAVVRFQYMPRLALVVVAVPQG-PDHVLSELFPGDDGLRTPNLVNHMMYGARVGAAGVFEYPADVPARPYRWAQWLAGFHFNAPEWEL-----------------RAPLEPSTRAVVGRVRARVTSRAALEAQLQQLKAGTLPAPAPSLAAQFPPAAAGTPRAVANWQEVAPTPHHTPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARRASTPSEL-------AAAATGRRAF----------ACRLRAG-GAE--VAARIKVHPDYPLVAPAFKLRASGRRGSGGSGGAAVAAADLDAVEAEVNAHCAELMGRDVRTWDALLTHQLLRACACLEALAAGGAAASVXXXXXXXXXXGVRARRGRARMPRLHYDALTEAFIHR 719
BLAST of mRNA_P-canaliculata_contig10630.848.1 vs. uniprot
Match: A0A2R5GMG2_9STRA (THO complex subunit 5-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMG2_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.190e-27 Identity = 194/771 (25.16%), Postives = 304/771 (39.43%), Query Frame = 3
Query: 294 ELHSTARQTHSVIERLRSKVAVSKQSMDENHLQLENLLYERDYLSRETQLCKDFTMSELGKM--------EEDEEQGFLEDVDTL---QTEEEHARNLRILTDQKDKRRRSQQELEHAQIRIKGVNAAISDSKQYLSKLPDHLKDVEKALVPLKKNMPWRPGARRGRHEQAADLPGPLFILYCQLEAYCD-FVRDETACEEENTSLSLLSSSSLTSYEDDQGVDAPA-------------------VSLTLASAKAHVSALAKAAAEGPNDSTA--SAIGDRRASPKVTSNDTLESCGPAAPKRARLLYQEQFEGDDKMMMMISKSEAGRLLLDALKPSSLEVVLTLNIANVDGNDSISGGRSKSRRTKNGGEAAGAVGKDATSFAARFSYLPALGIVTVCPQAGFPPCLLVNLFPNDTGRNTPNPSNHHSQAARASASGIFEFPSDVPCRPYLWAQWLAGLHFPHAADVVGGYGAAAESGAIGGEREKGPIEPSTRAVMSALLSRLRTHASLAKQLRSF-----------SSKGLSPSTMLQDEVLETTGNIELRSWKELSSPELQQAAKTFAERDTSTAGDIEGTVPGGTAAP--------AGRQAWERYGARYFKGSFKIKKGRGNERVVEMLVEVPSEYPLRPSLISLAENGNSSVQEELRMITNEVNSHYDTLLTEDVTSWDHLLSKQVSLVMECL-----VARPVGGFV--------------------------------RLRRGRMRRKPVMFDRLERTFVHR 2339
EL +R+ L ++ +K+S ++ L L+NLLYE+ YL RE + C+ F ++E K+ E + L+D+ +L E+ H +L L+ + RR Q L + ++ V SD +L +LP ++D+ KA P++++ R R RHE +LP PL+++YCQLEAY D F + ++ +++ L+++ ++ + + + G + T+ +A GD+ + +D S GPAA KR + K + + GR L+D S V+ L N + S+ F + PAL +VTV +A P LL N++PNDTG+ P S + A A EFP D+P RPY W QWLAG + + G AE+ +PS +++ ++L R+ +L++QL + S++GL PS L W+E++ E +R TST V + AP A AW ++G R F G + E VV++ V+ YP R +L NS+ LR+I EVN H D L D LLS Q+ + CL +R VG F R RGR RR ++D R+F HR
Sbjct: 73 ELKRRSREAFCAAAGLLEQLDAAKKSAEDRQLSLQNLLYEKAYLRREIERCRKFELTENAKIDLVSRADFEASASESLLKDIRSLPEGSQEQAHKVSLCRLSHELQLRRDLQNRLRTLRESVQSVKETTSDRLAFLDELPRKMQDIVKATKPVQEHFGDRVIDRLARHELCRELPEPLYMIYCQLEAYGDSFGGVGVSVAKDQAAVARLAAAHISDSQHGKAEKGSQDEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRGSANVTSGGAATGDKEVGDPMVVDDVAGS-GPAAKKRRLSGKADDAADGVKKLQPVD----GRPLVD----SGYSVLAKLESPNRQIDVSLV-----------------------------FKFYPALKVVTV--EAENRPGLLANIYPNDTGQFLPRASLDTTAAQGARK----EFPEDLPDRPYKWLQWLAGSY------NLPPEGPGAEA------------QPSMGSIVQSILERVGAQEALSEQLHALKKCPHPVPVHPSAEGLFPSK----------ATTRLVKWEEMTEAEAD-------DRITST------QVARASGAPIFHRRREAATSSAWTKFGRRCFHGVMETTDKNRVEAVVQVFVD----YPQRAPHFTLLPTSNST----LRIIQTEVNDHADELRAADQL---RLLSHQLRRLQMCLDVMTSSSRAVGQFAGVMDGMDEITGDEPSASSSERGSSSATASKMDRKLRGRDRRLAFVYDPPSRSFTHR 747
BLAST of mRNA_P-canaliculata_contig10630.848.1 vs. uniprot
Match: A0A484DXX6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXX6_BRELC) HSP 1 Score: 131 bits (330), Expect = 1.230e-27 Identity = 194/774 (25.06%), Postives = 324/774 (41.86%), Query Frame = 3
Query: 144 FQSLSASLEKLILSIAQDWENAAKVPLDSTGDGVSKPIHLKMRRAQ--LLFTELHSTARQTHSVIERLRSKVAVSKQSMDENHLQLENLLYERDYLSRETQLCKDFTMSELGKMEEDEEQGFLEDVDTLQTEE-EHARNLRILTDQKDKRRRSQQELEHAQIRIKGVNAAISDSKQYLSKLPDHLKDVEKALVPLKKNMPWRPGARRGRHEQAA-DLPGPLFILYCQLEAYCDFVRDETACEEENTSLSLLSSSSL----TSYEDDQGVDAPAVSLTLASAKAHVSALAKA--AAEGPNDSTASAIGDRRASPKVTSNDTLESCGPAAPKRARLLYQEQFEGDDKMMMMISKSEAGRLLLDALKPSSLEVVLTLNIANVDGNDSISGGRSKSRRTKNGGEAAGAVGKDATSFAARFSYLPALGIVTVCPQAGFPPCL---------LVNLFPNDTGRNTPNPSNHHSQAARASASGIFEFPSDVPCRPYLWAQWLAGL---HFPHAADVVGGYGAAAESGAIGGEREKGPIEPSTRAVMSALLSRLRTHASLAKQLRSFS--SKGLSPSTM-----LQDEVLETTGNIELRSWKELSSPELQQAAKTFAERDTSTAGDIEGTVPGGTAAPAGRQAWERYGARYFKGSFKIKKGRGNERV-VEMLVEVPSEYPLR-PSLISLAENGNSSVQEELRMITNEVNSHYDTLLTEDVTSWDHLLSKQVSLVMECL---VARPVGG--------FVRLRRGRMRRKPVMFDRLERTFVHR 2339
Q L + + L I +E K LD + +K RR + LL T + S R T + R +V K + + LQL+NLLYE+D+L RE + C+ F EL K+ FL +Q + H ++L LT + + R++ Q EL+ +++I ++ AI+ + +L +PD + ++ A L+ M A R RH +A +LP PL++LYC+LEAY + D + L+++++++L Y Q A V ++ K S+L + P+ ++I R S ++ + + LE ++ + ++E + + ++ +K L+V LTL + + + G F F Y P IVTV P L L+NLFP D G P +++ + FP+ CRPY W Q++ GL PH +++ +A ++ + R IEPS R VM+ L++R T L L+ + SK L+ T+ L + L+ WKE+ P ++ K G I +V R + RYF +F +E + V +V++ EYPLR P + S ++ + + + EVN++Y+ L+ S +LL QV + CL VG F R RRG+ RR+ ++ D + HR
Sbjct: 8 LQQLQTTCDALKAEITGLYEQRGKKHLDE--------LRVKQRRWRVLLLLTAMKSGLRDTFLESDARRMRVQEQKDVTEAHQLQLQNLLYEKDHLLREIRRCRGFRTKELDKIT------FLNGPLPIQADSVTHQQHLDQLTQELEARKQLQTELKDLKLQILEMHDAIATKQTFLDTVPDQVAGIQAATTGLQALMGKPIVATRTRHSRAKMELPTPLYVLYCELEAYQEASEDAG----KQLHLAIVNATNLQQSTNEYRKRQFPSALHVD-SIKKRKPSSSSLTSQDIVSRSPSLQRENSISHERESGEILAINPLEKHQTKEEQKNGTFWHHEYENESPLY---------KVWTPHVKALELKVSLTLPMD--EPQEPFQTG----------------------IFTLVFQYYPIAKIVTVEVTKTVPNILNAITTSQRILMNLFPGDDGNQVPQGFINYAFQEENNPYVEMTFPTTASCRPYYWTQYICGLTPLQRPHESNL-----SAKKTRQLLSRR----IEPSLRTVMNQLINRCVTTMILTTHLKQLTRASKTLNGRTLFRVHPLAQSLFPRDRTASLQEWKEIPLPTDEKLQKH---------GIINASV---------RADFSCTNCRYFCATF------NHEAIQVSAIVKIAPEYPLRAPRFLFQPCTRISGLENQWKEVEIEVNAYYNELIPHG--SEQYLLLHQVRKIEMCLDVLCKNAVGDTKTDVSLWFGRERRGKDRRQALVMDPALKELRHR 694
BLAST of mRNA_P-canaliculata_contig10630.848.1 vs. uniprot
Match: A0A397EAB2_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EAB2_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.310e-18 Identity = 67/202 (33.17%), Postives = 104/202 (51.49%), Query Frame = 3
Query: 222 LDSTGDGVSKPIHLKMRRAQLLFTELHSTARQTHSVIERLRSKVAVSKQSMDENHLQLENLLYERDYLSRETQLCKDFTMSELGKMEEDEEQGFLEDV-DTLQTEEEHARNLRILTDQKDKRRRSQQELEHAQIRIKGVNAAISDSKQYLSKLPDHLKDVEKALVPLKKNMPWRPGARRGRHEQAADLPGPLFILYCQLEAY 824
+D G SK + +A L ++ + R+T E R +VA K ++ +HL+L+NLLYE+D L RE + C+ F EL K+E F + V L ++ H R+L+ L D+ R+ Q +H + +I V A L LP HL +E+A PL+ + R RH+ A LP PL++L+C+L+AY
Sbjct: 1 MDDNGTTTSKDVV----KALCLLKDVKQSTRETFLDAEVYRRRVAEQKDLVEAHHLKLQNLLYEKDNLLREIKRCRGFPTKELDKIE------FKDGVLPVLVDDDRHKRHLQRLDDELSDRKALLQHQQHLKTQISSVEDATQSKHALLDALPAHLAAIEEASRPLQALLSVPISDSRDRHQAAKALPTPLYLLFCELDAY 192
BLAST of mRNA_P-canaliculata_contig10630.848.1 vs. uniprot
Match: A0A397BRD6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BRD6_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.520e-18 Identity = 75/238 (31.51%), Postives = 115/238 (48.32%), Query Frame = 3
Query: 222 LDSTGDGVSKPIHLKMRRAQLLFTELHSTARQTHSVIERLRSKVAVSKQSMDENHLQLENLLYERDYLSRETQLCKDFTMSELGKMEEDEEQGFLEDV-DTLQTEEEHARNLRILTDQKDKRRRSQQELEHAQIRIKGVNAAISDSKQYLSKLPDHLKDVEKALVPLKKNMPWRPGARRGRHEQAADLPGPLFILYCQLEAYCDFVRDETACEEENTSLSLLSSSSLTSYEDDQGVDA 932
+D G SK + +A L ++ + R+T E R +VA K ++ +HL+L+NLLYE+D L RE + C+ F EL K+E F + V L ++ H R+L+ L D+ R+ Q +H + +I V A L LP HL +E+A PL+ + R RH+ A LP PL++L+C+L+AY A ++ LS L S +G DA
Sbjct: 1 MDDNGTTTSKDVV----KALCLLKDVKQSTRETFLDAEVYRRRVAEQKDLVEAHHLKLQNLLYEKDNLLREIKRCRGFPTKELDKIE------FKDGVLPVLVDDDRHKRHLQRLDDELSDRKALLQHQQHLKTQISSVEDATQSKHALLDALPAHLAAIEEASRPLQALLSVPISDSRDRHQAAKALPTPLYLLFCELDAYLSIHAGSGAVGIADSKAGPLSKLKLKSTRGKEGPDA 228
BLAST of mRNA_P-canaliculata_contig10630.848.1 vs. uniprot
Match: W4FPC7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPC7_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 8.770e-18 Identity = 75/238 (31.51%), Postives = 115/238 (48.32%), Query Frame = 3
Query: 222 LDSTGDGVSKPIHLKMRRAQLLFTELHSTARQTHSVIERLRSKVAVSKQSMDENHLQLENLLYERDYLSRETQLCKDFTMSELGKMEEDEEQGFLEDV-DTLQTEEEHARNLRILTDQKDKRRRSQQELEHAQIRIKGVNAAISDSKQYLSKLPDHLKDVEKALVPLKKNMPWRPGARRGRHEQAADLPGPLFILYCQLEAYCDFVRDETACEEENTSLSLLSSSSLTSYEDDQGVDA 932
+D G SK + +A L ++ + R+T E R +VA K ++ +HL+L+NLLYE+D L RE + C+ F EL K+E F + V L ++ H R+L+ L D+ R+ Q +H + +I V A L LP HL +E+A PL+ + R RH+ A LP PL++L+C+L+AY A ++ LS L S +G DA
Sbjct: 29 MDDNGTTTSKDVV----KALCLLKDVKQSTRETFLDAEVYRRRVAEQKDLVEAHHLKLQNLLYEKDNLLREIKRCRGFPTKELDKIE------FKDGVLPVLVDDDRHKRHLQRLDDELSDRKALLQHQQHLKTQISSVEDATQSKHALLDALPAHLAAIEEASRPLQALLSVPISDSRDRHQAAKALPTPLYLLFCELDAYLSIHAGSGAVGIADSKAGPLSKLKLKSTRGKEGPDA 256
BLAST of mRNA_P-canaliculata_contig10630.848.1 vs. uniprot
Match: A0A3R7AAE6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AAE6_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.090e-17 Identity = 76/240 (31.67%), Postives = 117/240 (48.75%), Query Frame = 3
Query: 222 LDSTGDGVSKPIHLKMRRAQLLFTELHSTARQTHSVIERLRSKVAVSKQSMDENHLQLENLLYERDYLSRETQLCKDFTMSELGKMEEDEEQGFLEDV-DTLQTEEEHARNLRILTDQKDKRRRSQQELEHAQIRIKGVNAAISDSKQYLSKLPDHLKDVEKALVPLKKNMPWRPGARRGRHEQAADLPGPLFILYCQLEAYCDFVRDETACEEENTSLSLLSSSSLTSYEDDQG-VDAP 935
+D G SK + +A L ++ + R+T E R +VA K ++ +HL+L+NLLYE+D L RE + C+ F EL K+E F + V L ++ H R+L+ L D+ R+ Q +H + +I V A L LP HL +E+A PL+ + R RH+ A LP PL++L+C+L+AY A ++ LS L S +G VD+P
Sbjct: 1 MDDNGTTTSKDVV----KALCLLKDVKQSTRETFLDAEVYRRRVAEQKDLVEAHHLKLQNLLYEKDNLLREIKRCRGFPTKELDKIE------FKDGVLPVLVDDDRHKRHLQRLDDELSDRKALLQHQQHLKTQISSVEDATQSKHALLDALPAHLAAIEEASRPLQALLSVPISDSRDRHQAAKALPTPLYLLFCELDAYLSIHAGSGAVGIADSKAGPLSKLKLKSTRGKEGPVDSP 230
BLAST of mRNA_P-canaliculata_contig10630.848.1 vs. uniprot
Match: W4FPE9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPE9_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.860e-17 Identity = 75/238 (31.51%), Postives = 115/238 (48.32%), Query Frame = 3
Query: 222 LDSTGDGVSKPIHLKMRRAQLLFTELHSTARQTHSVIERLRSKVAVSKQSMDENHLQLENLLYERDYLSRETQLCKDFTMSELGKMEEDEEQGFLEDV-DTLQTEEEHARNLRILTDQKDKRRRSQQELEHAQIRIKGVNAAISDSKQYLSKLPDHLKDVEKALVPLKKNMPWRPGARRGRHEQAADLPGPLFILYCQLEAYCDFVRDETACEEENTSLSLLSSSSLTSYEDDQGVDA 932
+D G SK + +A L ++ + R+T E R +VA K ++ +HL+L+NLLYE+D L RE + C+ F EL K+E F + V L ++ H R+L+ L D+ R+ Q +H + +I V A L LP HL +E+A PL+ + R RH+ A LP PL++L+C+L+AY A ++ LS L S +G DA
Sbjct: 29 MDDNGTTTSKDVV----KALCLLKDVKQSTRETFLDAEVYRRRVAEQKDLVEAHHLKLQNLLYEKDNLLREIKRCRGFPTKELDKIE------FKDGVLPVLVDDDRHKRHLQRLDDELSDRKALLQHQQHLKTQISSVEDATQSKHALLDALPAHLAAIEEASRPLQALLSVPISDSRDRHQAAKALPTPLYLLFCELDAYLSIHAGSGAVGIADSKAGPLSKLKLKSTRGKEGPDA 256
BLAST of mRNA_P-canaliculata_contig10630.848.1 vs. uniprot
Match: A0A7S2Y031_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y031_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.810e-16 Identity = 78/258 (30.23%), Postives = 116/258 (44.96%), Query Frame = 3
Query: 135 LRRFQSLSASLEKLILSIAQDWENAAKVPLDSTGDGVSKPIHLKMRRAQLLFTELHSTARQTHSVIERLRSKVAVSKQSMDENHLQLENLLYERDYLSRETQLCKDFTMSELGKMEEDEEQ------------------GFLEDVDTLQTEEEHARNLRILTDQKDKRRRSQQELEHAQIRIKGVNAAISDSKQYLSKLPDHLKDVEKALVPLKKNMPWRPGARRGRHEQAA----------DLPGPLFILYCQLEAY 824
++ F + S LE+L+ E + +S G + +A L EL +R+ H ++ R + +K+S+D+ LQL+NLLYE+ +L R+ LC+DF EL KM +DE G L D+D L E H +L L +R+ QEL Q ++K + + KQ+L++LP HL+ + KA L K M G G A LP PLF+LY QL Y
Sbjct: 4 IKSFNTSSEQLEQLM-------EEMKSLDKESKAGGAE--LQKTASKAMKLLLELKRYSRRAHMGVDACRKDIVSAKESVDKQQLQLQNLLYEKAHLQRQIMLCRDFATPELDKMAKDEAATAEAGEAGAGRGEKGLGLGLLGDIDQLHDREVHQGHLDTLAAHIQERKELAQELAEVQAQVKVTASQGAARKQFLAQLPHHLQAILKASESLSKYMG---GGAEGEGANKAPAGASVAEVRQLPRPLFVLYSQLHGY 249
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 671.4 |
| Seed ortholog evalue | 4.9e-190 |
| Seed eggNOG ortholog | 2880.D8LF18 |
| Preferred name | THOC5 |
| KEGG ko | ko:K05291,ko:K13174 |
| KEGG Pathway | ko00563,ko01100,ko03013,map00563,map01100,map03013 |
| KEGG Module | M00405,M00406 |
| GOs | GO:0000003,GO:0000228,GO:0000280,GO:0000346,GO:0000347,GO:0000445,GO:0000902,GO:0001701,GO:0001824,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002683,GO:0002761,GO:0002762,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006355,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006996,GO:0007049,GO:0007140,GO:0007275,GO:0007276,GO:0008104,GO:0008150,GO:0008152,GO:0008283,GO:0009266,GO:0009408,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010793,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0017145,GO:0019219,GO:0019222,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0030097,GO:0030099,GO:0030154,GO:0030224,GO:0031123,GO:0031124,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031503,GO:0031974,GO:0031981,GO:0031990,GO:0032239,GO:0032386,GO:0032501,GO:0032502,GO:0032504,GO:0032784,GO:0032786,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033036,GO:0033157,GO:0033554,GO:0034605,GO:0034613,GO:0034641,GO:0035162,GO:0042886,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044403,GO:0044417,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044703,GO:0044766,GO:0045184,GO:0045595,GO:0045596,GO:0045637,GO:0045638,GO:0045649,GO:0045650,GO:0045787,GO:0045893,GO:0045935,GO:0046483,GO:0046784,GO:0046822,GO:0046825,GO:0046831,GO:0046907,GO:0048232,GO:0048285,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048568,GO:0048583,GO:0048585,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050657,GO:0050658,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051028,GO:0051049,GO:0051093,GO:0051168,GO:0051169,GO:0051171,GO:0051173,GO:0051179,GO:0051223,GO:0051234,GO:0051236,GO:0051239,GO:0051241,GO:0051252,GO:0051254,GO:0051301,GO:0051302,GO:0051321,GO:0051641,GO:0051649,GO:0051701,GO:0051704,GO:0051716,GO:0051726,GO:0051836,GO:0060215,GO:0060255,GO:0060341,GO:0065007,GO:0070013,GO:0070201,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090304,GO:0097159,GO:0140013,GO:1901360,GO:1901363,GO:1901976,GO:1901977,GO:1902105,GO:1902106,GO:1902579,GO:1902680,GO:1903046,GO:1903131,GO:1903506,GO:1903508,GO:1903706,GO:1903707,GO:1903827,GO:2000001,GO:2000002,GO:2000026,GO:2000035,GO:2000112,GO:2000197,GO:2001020,GO:2001021,GO:2001141 |
| EggNOG free text desc. | positive regulation of DNA-templated transcription, elongation |
| EggNOG OGs | KOG2216@1,KOG2216@2759 |
| COG Functional cat. | E |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03019,ko03041 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | THO complex, subunit 5 |
| Ec32 ortholog | Ec-21_006380.1 |
| Exons | 12 |
| Model size | 3601 |
| Cds size | 2250 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815633.8716962-UTR-P-canaliculata_contig10630:2788..2880 | 1622815633.8716962-UTR-P-canaliculata_contig10630:2788..2880 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10630 2789..2880 + |
| 1693494177.9677796-UTR-P-canaliculata_contig10630:2788..2880 | 1693494177.9677796-UTR-P-canaliculata_contig10630:2788..2880 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10630 2789..2880 + |
| 1622815634.0478675-UTR-P-canaliculata_contig10630:9865..11124 | 1622815634.0478675-UTR-P-canaliculata_contig10630:9865..11124 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10630 9866..11124 + |
| 1693494178.1144204-UTR-P-canaliculata_contig10630:9865..11124 | 1693494178.1144204-UTR-P-canaliculata_contig10630:9865..11124 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10630 9866..11124 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815633.882382-CDS-P-canaliculata_contig10630:2880..3131 | 1622815633.882382-CDS-P-canaliculata_contig10630:2880..3131 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 2881..3131 + |
| 1693494177.9868734-CDS-P-canaliculata_contig10630:2880..3131 | 1693494177.9868734-CDS-P-canaliculata_contig10630:2880..3131 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 2881..3131 + |
| 1622815633.8950913-CDS-P-canaliculata_contig10630:4013..4127 | 1622815633.8950913-CDS-P-canaliculata_contig10630:4013..4127 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 4014..4127 + |
| 1693494177.997015-CDS-P-canaliculata_contig10630:4013..4127 | 1693494177.997015-CDS-P-canaliculata_contig10630:4013..4127 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 4014..4127 + |
| 1622815633.9080915-CDS-P-canaliculata_contig10630:4922..5054 | 1622815633.9080915-CDS-P-canaliculata_contig10630:4922..5054 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 4923..5054 + |
| 1693494178.0071988-CDS-P-canaliculata_contig10630:4922..5054 | 1693494178.0071988-CDS-P-canaliculata_contig10630:4922..5054 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 4923..5054 + |
| 1622815633.9197922-CDS-P-canaliculata_contig10630:5541..5676 | 1622815633.9197922-CDS-P-canaliculata_contig10630:5541..5676 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 5542..5676 + |
| 1693494178.0176878-CDS-P-canaliculata_contig10630:5541..5676 | 1693494178.0176878-CDS-P-canaliculata_contig10630:5541..5676 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 5542..5676 + |
| 1622815633.9340162-CDS-P-canaliculata_contig10630:5850..5966 | 1622815633.9340162-CDS-P-canaliculata_contig10630:5850..5966 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 5851..5966 + |
| 1693494178.0272372-CDS-P-canaliculata_contig10630:5850..5966 | 1693494178.0272372-CDS-P-canaliculata_contig10630:5850..5966 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 5851..5966 + |
| 1622815633.9446595-CDS-P-canaliculata_contig10630:6621..6868 | 1622815633.9446595-CDS-P-canaliculata_contig10630:6621..6868 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 6622..6868 + |
| 1693494178.0364323-CDS-P-canaliculata_contig10630:6621..6868 | 1693494178.0364323-CDS-P-canaliculata_contig10630:6621..6868 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 6622..6868 + |
| 1622815633.9584854-CDS-P-canaliculata_contig10630:7172..7339 | 1622815633.9584854-CDS-P-canaliculata_contig10630:7172..7339 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 7173..7339 + |
| 1693494178.046116-CDS-P-canaliculata_contig10630:7172..7339 | 1693494178.046116-CDS-P-canaliculata_contig10630:7172..7339 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 7173..7339 + |
| 1622815633.9717572-CDS-P-canaliculata_contig10630:7589..8166 | 1622815633.9717572-CDS-P-canaliculata_contig10630:7589..8166 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 7590..8166 + |
| 1693494178.0629888-CDS-P-canaliculata_contig10630:7589..8166 | 1693494178.0629888-CDS-P-canaliculata_contig10630:7589..8166 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 7590..8166 + |
| 1622815633.991503-CDS-P-canaliculata_contig10630:8458..8678 | 1622815633.991503-CDS-P-canaliculata_contig10630:8458..8678 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 8459..8678 + |
| 1693494178.0756822-CDS-P-canaliculata_contig10630:8458..8678 | 1693494178.0756822-CDS-P-canaliculata_contig10630:8458..8678 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 8459..8678 + |
| 1622815634.007893-CDS-P-canaliculata_contig10630:9082..9178 | 1622815634.007893-CDS-P-canaliculata_contig10630:9082..9178 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 9083..9178 + |
| 1693494178.0854278-CDS-P-canaliculata_contig10630:9082..9178 | 1693494178.0854278-CDS-P-canaliculata_contig10630:9082..9178 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 9083..9178 + |
| 1622815634.021931-CDS-P-canaliculata_contig10630:9472..9578 | 1622815634.021931-CDS-P-canaliculata_contig10630:9472..9578 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 9473..9578 + |
| 1693494178.0950875-CDS-P-canaliculata_contig10630:9472..9578 | 1693494178.0950875-CDS-P-canaliculata_contig10630:9472..9578 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 9473..9578 + |
| 1622815634.0349557-CDS-P-canaliculata_contig10630:9776..9865 | 1622815634.0349557-CDS-P-canaliculata_contig10630:9776..9865 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 9777..9865 + |
| 1693494178.1037264-CDS-P-canaliculata_contig10630:9776..9865 | 1693494178.1037264-CDS-P-canaliculata_contig10630:9776..9865 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10630 9777..9865 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10630.848.1 >prot_P-canaliculata_contig10630.848.1 ID=prot_P-canaliculata_contig10630.848.1|Name=mRNA_P-canaliculata_contig10630.848.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=750bp
MPTEKREGSIAEKPLRRFQSLSASLEKLILSIAQDWENAAKVPLDSTGDG VSKPIHLKMRRAQLLFTELHSTARQTHSVIERLRSKVAVSKQSMDENHLQ LENLLYERDYLSRETQLCKDFTMSELGKMEEDEEQGFLEDVDTLQTEEEH ARNLRILTDQKDKRRRSQQELEHAQIRIKGVNAAISDSKQYLSKLPDHLK DVEKALVPLKKNMPWRPGARRGRHEQAADLPGPLFILYCQLEAYCDFVRD ETACEEENTSLSLLSSSSLTSYEDDQGVDAPAVSLTLASAKAHVSALAKA AAEGPNDSTASAIGDRRASPKVTSNDTLESCGPAAPKRARLLYQEQFEGD DKMMMMISKSEAGRLLLDALKPSSLEVVLTLNIANVDGNDSISGGRSKSR RTKNGGEAAGAVGKDATSFAARFSYLPALGIVTVCPQAGFPPCLLVNLFP NDTGRNTPNPSNHHSQAARASASGIFEFPSDVPCRPYLWAQWLAGLHFPH AADVVGGYGAAAESGAIGGEREKGPIEPSTRAVMSALLSRLRTHASLAKQ LRSFSSKGLSPSTMLQDEVLETTGNIELRSWKELSSPELQQAAKTFAERD TSTAGDIEGTVPGGTAAPAGRQAWERYGARYFKGSFKIKKGRGNERVVEM LVEVPSEYPLRPSLISLAENGNSSVQEELRMITNEVNSHYDTLLTEDVTS WDHLLSKQVSLVMECLVARPVGGFVRLRRGRMRRKPVMFDRLERTFVHR* back to topmRNA from alignment at P-canaliculata_contig10630:2789..11124+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig10630.848.1 ID=mRNA_P-canaliculata_contig10630.848.1|Name=mRNA_P-canaliculata_contig10630.848.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=8336bp|location=Sequence derived from alignment at P-canaliculata_contig10630:2789..11124+ (Pelvetia canaliculata dioecious) AGTGAACTCCGCAAATCGTTTCGCCGGAGGTCGTTTTTATCACTTTATGA
CTGAAAGCTAGAGAGGTGGTCCGTTCCGAGCGCAATAGGGGGATGCCGAC
TGAGAAAAGGGAGGGGTCTATTGCGGAGAAGCCACTTCGTAGGTTTCAGT
CTCTGTCCGCATCGTTGGAGAAGTTGATACTGTCGATCGCCCAAGACTGG
GAAAATGCAGCCAAAGTACCCCTTGACAGCACCGGCGACGGGGTTAGCAA
ACCCATCCACCTCAAGATGCGTAGGGCGCAGCTTCTGTTCACGGAGTTGC
ACTCAACAGCAAGGCAAACGCACAGCGTCATCGAGCGTTTGAGGTCAGTA
ATGATTTAGTTGTAGTTTTTCTGTCCCCTGGATCGCGTGCACCTTTCTGG
CTGCTTCGGCAGAGAACCTAAGCCCGAGGTTGACGATTTTCTCCCATTAC
TACTATTATTAGAGCCTACAGAGTTAGTACTGTCTGTACTCGTGTGTAAG
CGTAAAAGTATACAGTGAGTACAGTAGTCGATGTGCCCCTTTATTGAGAG
GACAACCCTTATTATTTTATTAACGTCGTACAAGCGAGGACTGCTTTGTT
CGATCACATGACGCGGGACGGGACTGCCGAAACCGTCTCGCGAGACCTGA
TTCTCAGGTACGAACGCGGACAGGGCAACAGCTGACCTCAAGCAGGATTG
GCAACCTTACCCGGTTGATCCATACTCTTGCTATATGTGTGACTATACAT
ACTTGTAGTGTAAGTGTGTTCTCTGTAGTATTAGAATGTCCTGCGTACTG
GGTACCGGCGATTGCTAGTGCTGCTGCTGCTGCGGTTGCTCTGCGTTCGT
TGTGGTGTTGACGCATTTTAAGCGCGCCAAAAGCTTTCAACGAAGCTTTA
AGTTTTCGTCGATATCTCCGTCTCATACTTGTAACGATCACTAATCACTT
GAGTTCACTCAGTGCATTGTTACTGCCGTGCTCAGCAGTACCGCGATCTG
CACGCTCCGATACCTGATGCCTACCCAAGTGCCTGTACTGTACTAATCCC
AACTAAAATAGGGATACAGTAGGACTAATAATGCTGATTGTAGATTTAAG
ACACATGTTTTACAATATCTCCGGGGGGTTGCTGAGCGCGACTTGACCGT
CCCCGAAGCGCTGATACTATTTTTAACAATTTCAAGGCTTGTGTAATGTG
CATGTTTTATGTACCCGTTTCTCAGGAGTAAAGTTGCGGTCTCGAAACAG
AGCATGGACGAAAATCACCTGCAGCTGGAGAACTTGCTGTACGAGAGGGA
CTACCTCTCCCGGGAGACACAGCTCTGCAAGGATTTCACGTGAGACCTCG
CTGCTGGGAATAGCGCGCCCGACCTATAGACTGTCCTAACCCACCTTTAT
ACAGGGCACGAGTCGCCGGATTCGCCCAGACGCGCGTCGAGCGTTCGCTG
CTTCCGTTATCCGAGTTTATGGTCATAGGAATCGGCGCCTCGTGTTGCTG
TGTAACGCTACACGTTACTGTGTTGTTGTTTTCCACAAGACAAGCAAGTG
ACGATTGAACTCTTTTCAAGGCTTACCATCCCTCTGTCTTTTGAGTCCTT
CGTAAGCGTCGCTGTCTATCCTCCTTGTGCCTCCAGCGAGGCTTCTGCAG
GGGAGATCTTTGGACCTTAGGCGAATGCCATCCTTAGACGGGTCGTTATT
TTTTTTTTCCGAAATATGGGTGAATTTATTAAGAAAACTCCAGGAGAAAG
ATTATATCTCTACCTTGCAGCTAGTGCACTGCACACTATCGTATACAATA
GTAGTTTCCTGATGGAAAGCGTGAGAACTTGGCTCATCAAAGTTAGAACT
CTGTTTGATGAGATTGGGAAGGCTAGACCTGCATCTCGATAAAAAACTGT
TTGGGCGTTACATCTCTCTCTGGATTAGACTGGCGGCATTGACATTGACA
TTGGCAACGTCGTACTTATAACATTGCGCGTTCACCGGCCCAATCGGCAG
AAAGCGAGAAACAAAATGAGACGATTGGCCATGATTCCCTTCACCTATTA
GATAGCAGTCGAAAATACCCAGGTTCCGGACCGTTCCGTGATTTTCTGCT
GTTCGCTGCTGGTTTGTGTTTGATGGCGCCGAAGGATGTCGGAGCTGGGC
AAGATGGAAGAAGACGAGGAGCAAGGCTTCTTGGAAGACGTGGACACGTT
GCAGACGGAGGAAGAGCACGCGCGGAACCTCAGGATCCTTACCGACCAGA
AGGACAAGCGAAGGAGGTCTGTGCGTGTATGTGGCCGCTTTTCCTTTGGG
CTTGGGGATACCGATGTTTCTATGTACTGGTATGCTACTGCGCTTTCGCC
TACAGTAATACAGTATTTGGTCGTGCGTTAGTAAAGCGGTCAGAGAAGTC
TGATGCCGCGGAAAGACCCGTGGCTCAAAAGCCTTAGAGGACGAAGTTCG
AGCATTGATTGACGCGCAAGAGACCTGAAACTGAATCGCAATTCAACCAC
TTGATGATAGGCGTGAACTTGAGCAAAATGGACTGACGTTTTCATATATA
CCAGGTAGGTACTTCACTTTTAGTTGTCCACAGACTGCAGAGCTGGTACG
GTCAGGCGGGATCAGTTACCTCGCATGTCGCATGGCCTCCTCGGTGTAGG
GTTGAGATTACAACCAATTATTTTTGGGTTGATTTTGCTTGCATCGTTGC
ATGAAGCATTGCGTCCTGTGCTGTTCCGCCATGCAATCTGGTTATCGTCG
CAGATCTCAGCAAGAACTGGAACACGCGCAAATCCGAATCAAGGGTGTGA
ACGCTGCCATCAGCGATAGCAAACAATACCTGTCCAAGCTACCAGACCAT
CTGAAGGACGTCGAGAAGGCGCTCGTTCCTCTCAAGAAGTGAGTCGTTCC
GCCCTGAACTGGTTTCTTTTTGTTGCGTACTGCAGAGTACAGCACCCCAG
CTCTCAATCTCCCTGACTTGAGTAATGCACAACTCATTACTACGCTACGG
TAAGTGCCGTAGATGGCTCCTACTCACAAGTCGCCGTTCGTACCGCTCCA
CATTCCTGACAGAAACATGCCGTGGCGTCCAGGGGCCCGCCGCGGTAGGC
ATGAACAGGCAGCTGACCTCCCCGGACCTCTTTTCATCCTTTACTGCCAG
CTTGAGGCGTACTGCGATTTTGTTCGGGGTAAGCCTTCTTTCGCAGTGCG
CTACATAATCCAGTCCGGCGCGCAAAAAAAAACACAAAAGTCATAGACGC
GATGTGGAAAAGGGGGAGACTTGAGTGTTGGTTCAGTAGAGGATGTCGAC
CAAGGAAATCTAGAGAATGGCATTAGAATAGCATTAGAATAGCATTAGAA
GGGAAGCACAGAGGGAAGCGCAAGGCGGGGCTTCAATAATAACTGTAAAG
AGATTAAGTCCCGCTTGTCGCGCCTGATCTGAGGTTTGCGTAATAAGTAT
CATTGATCCCCCCTGGCTAGTGGCATATAATGACTTTGATGACAGGGCCG
GATTGCACCGTTACGTGCAGGGCAATAGCCACACACGCACACGGAAGAAA
TAGCATGGATACCCCATTGGAATGTCGAATGCGAGTACTGTAGCTCAGAA
TGACTGCCAGAACGGGGCCAGATTGTGCGGTTATGCAACTCAATAAATAC
ACCATGCATACGCACACACTCTATTACTCCTCTGGGGATGCTCTTTATAG
AAGCAAATAATAACTAGTAGTTAATAGCAGGACAGGGTCAGATTACGTGG
TTATTTGCAATTTCATACCTTTGATACACTCACACAAGGTGTTCTGATGT
GCGCTCTCGCCGATTCTTCTACTCTCTTGACAGACGAAACGGCATGTGAG
GAGGAAAACACGTCATTATCGTTGCTATCATCGTCATCGTTGACATCTTA
CGAAGACGACCAAGGAGTCGACGCCCCCGCGGTGAGCTTGACTCTTGCTT
CCGCCAAAGCTCACGTGAGCGCCCTGGCGAAGGCCGCTGCAGAAGGACCA
AACGATTCCACGGCTTCTGCAATCGGCGACAGGAGGGCGAGCCCCAAGGT
CACCAGTAACGATACCCTAGAGTCCTGCGGGTGAGTGCGCTGTACGAAAA
GGACGCATGGTAGCGCTGGGCGCAAAGGAAGCCGCAACGCATCGTTCTGT
TGAGAATTAAGAGACGCTTGCACTGGCAAGTCCTCTTGACTTATTCTGGA
GAACTTTTAAGACGCTCTCTCTCGTGGTGCATGGCATTCTGGCTTGTGAC
CGGAGGAGATTTTATCCGGTGGGACTTTTCTGTCGGATTTGGTTACGACT
CCACCCACCGTGTACCGGTTGCCTGCAGGAGGTATGCCACCTGACAAGCC
CCTCACACCTATCTTGTGCCGTGTGATGACACAGACCTGCGGCGCCAAAA
CGAGCGAGGCTGCTATATCAGGAGCAATTCGAGGGCGACGACAAGATGAT
GATGATGATCTCCAAGAGCGAGGCGGGAAGGCTTTTGCTGGATGCCCTCA
AGCCATCTTCGCTCGAAGTCGTCCTCACTCTCAACATCGCCAACGTCGAT
GGTATACTGTAATGGTATTGTTGCCTTCGTTCCGACCTGTCAAGCTTCTC
GTCTTGCTGCAAAATAAAGAGTCAGGGAAGTTTCCTGCAGCCCTATCCTC
CCTACTAGTCCCTAATAGTGTCTACGACAATGTAAAATCTACAGGGCGAG
CGACCATCCGTATATAGAGCAAATCTTATCCCAACCACCGCCCTATCAGA
AATTCCTGTCGCATCACTTACCCCCCTCCGAATGCCGGCCACCGCGGGCA
GGGAACGACTCCATCAGCGGCGGTCGTTCGAAGAGTAGGCGCACTAAGAA
CGGAGGGGAAGCCGCAGGCGCCGTCGGCAAGGACGCCACCAGCTTTGCGG
CGCGCTTCTCCTATCTGCCAGCCCTCGGCATCGTGACCGTATGCCCCCAG
GCAGGCTTCCCCCCTTGTCTCCTCGTGAACCTCTTCCCCAACGACACCGG
CAGGAACACGCCTAACCCTTCCAACCACCACAGTCAAGCCGCGCGGGCAT
CGGCGTCTGGAATTTTTGAATTCCCATCGGACGTGCCGTGCAGACCGTAC
CTGTGGGCGCAGTGGTTGGCGGGCCTGCACTTCCCACACGCGGCAGACGT
TGTTGGCGGTTATGGTGCTGCGGCGGAGTCCGGGGCAATCGGAGGCGAGA
GGGAGAAAGGACCGATTGAGCCGTCGACCCGAGCGGTGATGTCGGCTCTT
CTATCGCGGCTTCGCACGCACGCGTCCTTGGCGAAGCAGCTGAGGAGCTT
CTCATCCAAGGGGTTATCACCTTCGACGATGCTTCAGGACGAGGTTCTCG
AGACCACGGGCAACATCGAACTTCGTAGGTGCATTTAGCTTTGCTCTACG
GTTGGCGCGCGAGATTTTGGTCTGGAAATGAGGTCTGTGTCTAATAATGC
TTCAGAGTAAGGTGTGTGCCACTCGGGAATGGAGTAATTCCTGGTAACAC
AAAGCGAAGGGTAAACGGTGAACGGTAACATACCGAGTCCCTCCCCTTAT
GCCCTCGCGGTATGTTACTATGTTACTGATGAGTGTCACTGACAGATTTG
TGACTGACTGACCCACCCCATGCATCGCTCAACACTGCCCTCGGGTTCTG
GCTGACATACGTGCTCCTAGCTGGAAGGAGCTGTCGAGTCCCGAACTTCA
GCAGGCAGCAAAGACTTTCGCGGAACGGGACACGTCGACGGCGGGGGATA
TAGAAGGCACGGTACCAGGGGGGACCGCAGCGCCCGCTGGCCGTCAGGCG
TGGGAGCGGTATGGCGCCAGATATTTCAAGGGATCCTTCAAGATAAAAAA
GGGCAGGGGAAATGAGCGTGTAGTGGAGATGCTAGTCGAGGTATGGCGAC
GAGGCAGTTGGTTATCCGGAGCAAAGATATCATAGACCATATTTCGATCA
CTCTACTTCATTATACATGTAAAAGTACGTTGATTACGTGCGTTCGAGTG
TTGATTCGTAGGCAATAATGACTGTAAGTTTTGTTATTTGTCCGTTTCAC
GAAAAGACGATACCAAAATGATGGATCGAACGTCTATCACTTCCGAGTGA
GATGGCACTGGAGGTTATTCGAGCTTAAGCCTCGCGATCTATTTTAGGCG
GGTATCCTCTAGGGCATTTTGTGCTGATAATAATTAAGGTTGTTGTCACG
GTACAATGCTTTGGTTTGCATGCGTTGGCGGTTCAATCTCTTCATTGCTT
AGGATCTCGAAATTGTCTTCTTGCTTTGGGTGTCATCATCACAGGTACCC
TCCGAGTATCCGCTGCGGCCATCGTTGATAAGCTTGGCGGAGAACGGTAA
CTCCTCGGTGCAAGAGGAGCTGCGCATGATCACCAACGAGGTGGGTACAC
CGCTTATGTAGGACTTGATTCCCACCTCTAGCACGTACACTATACTACGG
ACATGTCACAGATTACATAGTCTCACTAGTCCATCTCCAGAGTTGCCCCA
GATTGTGCTGCAGGCAAGAGGATGGTACGCAATGTGTTGAAGTCATGGTT
CCTACCTTTCCCCTTTTCTTCTTTTTCTTAGCTTCGCTTGTTTCCGGGCC
ACACCGCACCTGTATCAAGCCGTCGTATACCTCACATCACCAACGTACCG
TGCCGTGTCGGGCTTGTGGATACAACCATGAAAGGTGAACTCCCACTACG
ACACTCTGCTGACCGAGGATGTGACGTCATGGGATCATTTGCTGTCCAAG
CAAGTCAGCCTGGTTATGGAGTGCCTCGTTGCCAGACCCGGTAAGTTCAG
TATACGGAGTTCGGTGGGCGCCAGTCGAACCCATTTTCCTATCATGCCTG
TAACTCTGAAAGAAGCAGATAAATGTCGCCCTGAAGCGGCCCATCCTCCA
GCTCACGCAGTCCTATTCGTCACTTCTCTGTCGGCATGCTGCTGCCGCTT
CTGCTGCGTCTGCTACCGTTTGCTACCGATGCTTTCAGTCGGTGGCTTCG
TTAGGCTGAGGAGGGGGCGGATGAGGCGGAAGCCGGTCATGTTCGACCGC
CTCGAGCGTACTTTCGTGCACAGATGACTTTCGTACCCTAGAACACGGAG
CGCGGTCTTGTTGAATGGAAACAGCATCAAATGATTTGCTCTATTATAGT
ATCGCGTAATAGATCTGGCTATAAGATAAGAGCGGCTCAAGAGTCGCTCA
AGAGAAGGCGGGAGAGTGAAATAGTCGCTCGAGTCGGATAGCTATCAAGT
GTACGCACCTATCATACTGGTAGTTGAAGACACCTGCGCACCCGGCCGTT
ACCGAGTAAGCCGAGCTGACTGACTGTAGCTGCAAAGTGGCGTGAAGACG
ATTCCAACTTCGTCATTGCATGGAGAGAGAGAGGCCTATGCGAGGAAATT
CTCGGGTCGGTCGGTTCTAGAGCAAGGTTATAAATTTAAAATATTCCATA
GATACAGGGTAGAGGGAGATGAACGAGGAACATGCGCTCTCGCTACAGTC
GCGAGCTCCAACATGTGTGCCACGGGGCATGCTCGTCCGTCTGTACCAGG
TAGCTCCCGTGGAATACAGACACCACATGTAGTTCTTCCCAGCATGGACG
ATATTCTGCTGTGTTTTTTGTGTGCTTTGATATCTGCCGATGGACGTATT
GCACGTTCTAGGATATTATTATCTGCACCAACATGACCCATCTTCAACCC
CGGTTCACGTCTAGGTTGTTTTTCTTCAAGACTCTCCAGCCTCAAGAACC
TCACGAACGCATCCAAATGTCAAATAGGTACATAATTTACTATTTTTATT
TTAGACACAAATATTTTCATGCTCTCGTTGGAGCTTTTTAGATGTTCTTC
TGATCTTTTCCTGTCCAGCAGACCATGTACCGGATTGGCAAACGCGTATA
CTATATATTGGGTATGGTTGAGGCCTGATAGGTTAATGTGAAGAAAACAA
CGACAGTAACCATGTGTGGACACGAAGACATGACAACTGAAAGCAAGTAT
AATAGTTGTTGTGAAGATCACCTGGAGGCTTTCTGTAGATGGACAGACAA
TACAGTAGTTGTTTATTATCCCAAAGTATTATTACTGCTTTTGCTGCAAG
TACAGTGTGTGTGTGTGTGTGTATTGCCATCCCATTTATTCTGGAAGTCA
GGTTTGTGAACGTTCGCGCCTGAAAATTTGGTCTCGCGAGACGGGTTCGG
CAGTCCCGCCCCGCGTCAGCCATACTCAGGTTGAATCTTGTGCTTACTTA
GGCATTTCCGCGGTGTATGTACTAATAGTTCAGCTCTCGTACACCTTGAC
AACCAATGGTTGAACTCTGCTAACCTCACGTCTGCC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig10630:2789..11124+ >mRNA_P-canaliculata_contig10630.848.1 ID=mRNA_P-canaliculata_contig10630.848.1|Name=mRNA_P-canaliculata_contig10630.848.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=4500bp|location=Sequence derived from alignment at P-canaliculata_contig10630:2789..11124+ (Pelvetia canaliculata dioecious) ATGCCGACTGAGAAAAGGGAGGGGTCTATTGCGGAGAAGCCACTTCGTAG GTTTCAGTCTCTGTCCGCATCGTTGGAGAAGTTGATACTGTCGATCGCCC AAGACTGGGAAAATGCAGCCAAAGTACCCCTTGACAGCACCGGCGACGGG GTTAGCAAACCCATCCACCTCAAGATGCGTAGGGCGCAGCTTCTGTTCAC GGAGTTGCACTCAACAGCAAGGCAAACGCACAGCGTCATCGAGCGTTTGA GATGCCGACTGAGAAAAGGGAGGGGTCTATTGCGGAGAAGCCACTTCGTA GGTTTCAGTCTCTGTCCGCATCGTTGGAGAAGTTGATACTGTCGATCGCC CAAGACTGGGAAAATGCAGCCAAAGTACCCCTTGACAGCACCGGCGACGG GGTTAGCAAACCCATCCACCTCAAGATGCGTAGGGCGCAGCTTCTGTTCA CGGAGTTGCACTCAACAGCAAGGCAAACGCACAGCGTCATCGAGCGTTTG AGGAGTAAAGTTGCGGTCTCGAAACAGAGCATGGACGAAAATCACCTGCA GCTGGAGAACTTGCTGTACGAGAGGGACTACCTCTCCCGGGAGACACAGC TCTGCAAGGATTTCACGAGTAAAGTTGCGGTCTCGAAACAGAGCATGGAC GAAAATCACCTGCAGCTGGAGAACTTGCTGTACGAGAGGGACTACCTCTC CCGGGAGACACAGCTCTGCAAGGATTTCACGATGTCGGAGCTGGGCAAGA TGGAAGAAGACGAGGAGCAAGGCTTCTTGGAAGACGTGGACACGTTGCAG ACGGAGGAAGAGCACGCGCGGAACCTCAGGATCCTTACCGACCAGAAGGA CAAGCGAAGGAGGATGTCGGAGCTGGGCAAGATGGAAGAAGACGAGGAGC AAGGCTTCTTGGAAGACGTGGACACGTTGCAGACGGAGGAAGAGCACGCG CGGAACCTCAGGATCCTTACCGACCAGAAGGACAAGCGAAGGAGATCTCA GCAAGAACTGGAACACGCGCAAATCCGAATCAAGGGTGTGAACGCTGCCA TCAGCGATAGCAAACAATACCTGTCCAAGCTACCAGACCATCTGAAGGAC GTCGAGAAGGCGCTCGTTCCTCTCAAGAAATCTCAGCAAGAACTGGAACA CGCGCAAATCCGAATCAAGGGTGTGAACGCTGCCATCAGCGATAGCAAAC AATACCTGTCCAAGCTACCAGACCATCTGAAGGACGTCGAGAAGGCGCTC GTTCCTCTCAAGAAAAACATGCCGTGGCGTCCAGGGGCCCGCCGCGGTAG GCATGAACAGGCAGCTGACCTCCCCGGACCTCTTTTCATCCTTTACTGCC AGCTTGAGGCGTACTGCGATTTTGTTCGGGAAACATGCCGTGGCGTCCAG GGGCCCGCCGCGGTAGGCATGAACAGGCAGCTGACCTCCCCGGACCTCTT TTCATCCTTTACTGCCAGCTTGAGGCGTACTGCGATTTTGTTCGGGACGA AACGGCATGTGAGGAGGAAAACACGTCATTATCGTTGCTATCATCGTCAT CGTTGACATCTTACGAAGACGACCAAGGAGTCGACGCCCCCGCGGTGAGC TTGACTCTTGCTTCCGCCAAAGCTCACGTGAGCGCCCTGGCGAAGGCCGC TGCAGAAGGACCAAACGATTCCACGGCTTCTGCAATCGGCGACAGGAGGG CGAGCCCCAAGGTCACCAGTAACGATACCCTAGAGTCCTGCGGACGAAAC GGCATGTGAGGAGGAAAACACGTCATTATCGTTGCTATCATCGTCATCGT TGACATCTTACGAAGACGACCAAGGAGTCGACGCCCCCGCGGTGAGCTTG ACTCTTGCTTCCGCCAAAGCTCACGTGAGCGCCCTGGCGAAGGCCGCTGC AGAAGGACCAAACGATTCCACGGCTTCTGCAATCGGCGACAGGAGGGCGA GCCCCAAGGTCACCAGTAACGATACCCTAGAGTCCTGCGGACCTGCGGCG CCAAAACGAGCGAGGCTGCTATATCAGGAGCAATTCGAGGGCGACGACAA GATGATGATGATGATCTCCAAGAGCGAGGCGGGAAGGCTTTTGCTGGATG CCCTCAAGCCATCTTCGCTCGAAGTCGTCCTCACTCTCAACATCGCCAAC GTCGATGACCTGCGGCGCCAAAACGAGCGAGGCTGCTATATCAGGAGCAA TTCGAGGGCGACGACAAGATGATGATGATGATCTCCAAGAGCGAGGCGGG AAGGCTTTTGCTGGATGCCCTCAAGCCATCTTCGCTCGAAGTCGTCCTCA CTCTCAACATCGCCAACGTCGATGGGAACGACTCCATCAGCGGCGGTCGT TCGAAGAGTAGGCGCACTAAGAACGGAGGGGAAGCCGCAGGCGCCGTCGG CAAGGACGCCACCAGCTTTGCGGCGCGCTTCTCCTATCTGCCAGCCCTCG GCATCGTGACCGTATGCCCCCAGGCAGGCTTCCCCCCTTGTCTCCTCGTG AACCTCTTCCCCAACGACACCGGCAGGAACACGCCTAACCCTTCCAACCA CCACAGTCAAGCCGCGCGGGCATCGGCGTCTGGAATTTTTGAATTCCCAT CGGACGTGCCGTGCAGACCGTACCTGTGGGCGCAGTGGTTGGCGGGCCTG CACTTCCCACACGCGGCAGACGTTGTTGGCGGTTATGGTGCTGCGGCGGA GTCCGGGGCAATCGGAGGCGAGAGGGAGAAAGGACCGATTGAGCCGTCGA CCCGAGCGGTGATGTCGGCTCTTCTATCGCGGCTTCGCACGCACGCGTCC TTGGCGAAGCAGCTGAGGAGCTTCTCATCCAAGGGGTTATCACCTTCGAC GATGCTTCAGGACGAGGTTCTCGAGACCACGGGCAACATCGAACTTCGTA GGGAACGACTCCATCAGCGGCGGTCGTTCGAAGAGTAGGCGCACTAAGAA CGGAGGGGAAGCCGCAGGCGCCGTCGGCAAGGACGCCACCAGCTTTGCGG CGCGCTTCTCCTATCTGCCAGCCCTCGGCATCGTGACCGTATGCCCCCAG GCAGGCTTCCCCCCTTGTCTCCTCGTGAACCTCTTCCCCAACGACACCGG CAGGAACACGCCTAACCCTTCCAACCACCACAGTCAAGCCGCGCGGGCAT CGGCGTCTGGAATTTTTGAATTCCCATCGGACGTGCCGTGCAGACCGTAC CTGTGGGCGCAGTGGTTGGCGGGCCTGCACTTCCCACACGCGGCAGACGT TGTTGGCGGTTATGGTGCTGCGGCGGAGTCCGGGGCAATCGGAGGCGAGA GGGAGAAAGGACCGATTGAGCCGTCGACCCGAGCGGTGATGTCGGCTCTT CTATCGCGGCTTCGCACGCACGCGTCCTTGGCGAAGCAGCTGAGGAGCTT CTCATCCAAGGGGTTATCACCTTCGACGATGCTTCAGGACGAGGTTCTCG AGACCACGGGCAACATCGAACTTCGTAGCTGGAAGGAGCTGTCGAGTCCC GAACTTCAGCAGGCAGCAAAGACTTTCGCGGAACGGGACACGTCGACGGC GGGGGATATAGAAGGCACGGTACCAGGGGGGACCGCAGCGCCCGCTGGCC GTCAGGCGTGGGAGCGGTATGGCGCCAGATATTTCAAGGGATCCTTCAAG ATAAAAAAGGGCAGGGGAAATGAGCGTGTAGTGGAGATGCTAGTCGAGCT GGAAGGAGCTGTCGAGTCCCGAACTTCAGCAGGCAGCAAAGACTTTCGCG GAACGGGACACGTCGACGGCGGGGGATATAGAAGGCACGGTACCAGGGGG GACCGCAGCGCCCGCTGGCCGTCAGGCGTGGGAGCGGTATGGCGCCAGAT ATTTCAAGGGATCCTTCAAGATAAAAAAGGGCAGGGGAAATGAGCGTGTA GTGGAGATGCTAGTCGAGGTACCCTCCGAGTATCCGCTGCGGCCATCGTT GATAAGCTTGGCGGAGAACGGTAACTCCTCGGTGCAAGAGGAGCTGCGCA TGATCACCAACGAGGTACCCTCCGAGTATCCGCTGCGGCCATCGTTGATA AGCTTGGCGGAGAACGGTAACTCCTCGGTGCAAGAGGAGCTGCGCATGAT CACCAACGAGGTGAACTCCCACTACGACACTCTGCTGACCGAGGATGTGA CGTCATGGGATCATTTGCTGTCCAAGCAAGTCAGCCTGGTTATGGAGTGC CTCGTTGCCAGACCCGGTGAACTCCCACTACGACACTCTGCTGACCGAGG ATGTGACGTCATGGGATCATTTGCTGTCCAAGCAAGTCAGCCTGGTTATG GAGTGCCTCGTTGCCAGACCCGTCGGTGGCTTCGTTAGGCTGAGGAGGGG GCGGATGAGGCGGAAGCCGGTCATGTTCGACCGCCTCGAGCGTACTTTCG TGCACAGATGATCGGTGGCTTCGTTAGGCTGAGGAGGGGGCGGATGAGGC GGAAGCCGGTCATGTTCGACCGCCTCGAGCGTACTTTCGTGCACAGATGA back to top
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