mRNA_P-canaliculata_contig100272.80.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig100272.80.1
Unique NamemRNA_P-canaliculata_contig100272.80.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: UPI00167665F4 (response regulator n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI00167665F4)

HSP 1 Score: 354 bits (909), Expect = 4.370e-121
Identity = 183/255 (71.76%), Postives = 213/255 (83.53%), Query Frame = 1
Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFH 765
            MSLVE Y P++PYLRRFARALTGSQ+ GDTYVR ALEAL AG+AS+D  L PK+ L++MFL IW++TG  L+   A EG T   RV KLTPASRQAFLL ++EG+  +D A +M V  A A  ++ EAEADIEKELRTNVLIIEDEPIIAADIEG+V +LGHTVD+I+AT  +AV+ AKAK PG+VLADV LADGSSGIDAV DIL +Y+VPVIFITAFPERLLTG++PEPAYLISKPF P+NVKAAISQALFFH
Sbjct:    1 MSLVEKYAPHIPYLRRFARALTGSQSEGDTYVRAALEALVAGSASLDQNLSPKVGLFQMFLGIWNSTGGTLDDGSAPEGDTPEARVRKLTPASRQAFLLNAVEGIPAQDIAVIMRVEEAAAQSLLDEAEADIEKELRTNVLIIEDEPIIAADIEGIVEDLGHTVDAIAATETEAVKAAKAKKPGIVLADVQLADGSSGIDAVADILKKYDVPVIFITAFPERLLTGERPEPAYLISKPFRPENVKAAISQALFFH 255          
BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: A0A848V2Q5_9PROT (Response regulator n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V2Q5_9PROT)

HSP 1 Score: 351 bits (901), Expect = 6.960e-120
Identity = 186/257 (72.37%), Postives = 214/257 (83.27%), Query Frame = 1
Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFHDS 771
            MSLVE Y P+LPYLRRF+RALTGSQ+ GD YVR ALEAL AG A ++SEL PK+ALY+MFL IW+ TGA LE ++  +   A  R+ +LTP SRQAFLL +LEG+SV D A+VM  +  EA  ++ EAEADIE ELRTNVLIIEDEPIIAADIE LV ELGHTVD+I+ATH DAV  A+ K PG+VLAD+ LADGSSGIDAV+DIL  YNVPVIFITAFPERLLTGDKPEPAYLISKPF+PDNVKAAISQALFFH++
Sbjct:    1 MSLVEKYAPHLPYLRRFSRALTGSQSDGDRYVRVALEALVAGDAELNSELMPKVALYQMFLTIWNATGALLE-DDPGDAELASNRIRRLTPLSRQAFLLNALEGMSVDDIASVMGKSVEEAEALMMEAEADIENELRTNVLIIEDEPIIAADIESLVEELGHTVDAIAATHTDAVAAAEQKKPGIVLADIQLADGSSGIDAVEDILKSYNVPVIFITAFPERLLTGDKPEPAYLISKPFQPDNVKAAISQALFFHNA 256          
BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: UPI0003FD6F41 (response regulator n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0003FD6F41)

HSP 1 Score: 348 bits (894), Expect = 8.080e-119
Identity = 185/257 (71.98%), Postives = 212/257 (82.49%), Query Frame = 1
Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFHDS 771
            MSLVETY P+LPYLRRF+RALTGSQ+ GDTYVRTALEAL AG   ++ +L PKIALY+MFL IWSTTGA+LE +   E   A +RV KL P SRQAFLL +LEG++  D A VMN+ P  A  ++ EAE+DIEKELRTNVLIIEDEPIIAADIEGLV +LGH+VD+I+ATH DAV     K PGL+LADV LADGSSGI+AV++I    NVPVIFITAFPERLLTGDKPEPAYLISKPF+P NVKAAISQALFFHD+
Sbjct:    1 MSLVETYAPHLPYLRRFSRALTGSQSEGDTYVRTALEALVAGDIVLEGDLSPKIALYQMFLTIWSTTGAKLEADREDEAVPA-KRVRKLPPTSRQAFLLNALEGMTPADIAKVMNIAPEYADTLLAEAESDIEKELRTNVLIIEDEPIIAADIEGLVEDLGHSVDNIAATHKDAVSAVSEKKPGLILADVQLADGSSGIEAVEEITKTLNVPVIFITAFPERLLTGDKPEPAYLISKPFKPGNVKAAISQALFFHDA 256          
BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: UPI000379715B (response regulator n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI000379715B)

HSP 1 Score: 348 bits (892), Expect = 1.690e-118
Identity = 182/255 (71.37%), Postives = 211/255 (82.75%), Query Frame = 1
Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFH 765
            MSL+++  P+LPYLRRF+RALTGSQA GD YVR ALEAL AG + ID  + PK+ALYRMFL IW T+GA LE  +     T   R+ +LTP SRQAFLL +LEG+S  + A VMNV+  +A  ++ +AE+DIEKELRTNVLIIEDEPIIAADIE LV ELGHTVDSISATH++AV+NA AK PG+VLAD+ LADGSSGIDAV DIL +Y+VPVIFITAFPERLLTGDKPEPAYLISKPF P+NVKAAISQALFFH
Sbjct:    1 MSLLDSLAPHLPYLRRFSRALTGSQAEGDRYVRIALEALVAGNSEIDETIAPKVALYRMFLGIWDTSGAHLEA-DGQNTETTADRIRRLTPRSRQAFLLSALEGMSTGEIAIVMNVSDDDAQALLDDAESDIEKELRTNVLIIEDEPIIAADIEDLVEELGHTVDSISATHSEAVKNASAKKPGIVLADIQLADGSSGIDAVSDILKEYDVPVIFITAFPERLLTGDKPEPAYLISKPFRPENVKAAISQALFFH 254          
BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: A0A8J3CP60_9PROT (Response regulator n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CP60_9PROT)

HSP 1 Score: 342 bits (878), Expect = 2.270e-116
Identity = 181/257 (70.43%), Postives = 211/257 (82.10%), Query Frame = 1
Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFHDS 771
            MSLVE + P+LPYLRRF+RALTGSQ +GDTYVR ALEAL AG   +  ++ PK+AL++MFL IW++TGAQLE   + EG+TA  RV +L P SRQAFLL SLEGLS  D A VMNV    A  ++ +AE++IEKELRTNVLIIEDE IIAADIEGLV +LGHTVD++ AT  +AV+ AK K PG+VLADV LADGSSGIDAV DIL+ Y+VPVIFITAFPERLLTGDKPEPAYLISKPF P+NVKAAISQALFFH +
Sbjct:    1 MSLVEKFAPHLPYLRRFSRALTGSQTAGDTYVRNALEALVAGDTVLSEDMTPKLALFQMFLGIWNSTGAQLENTPSDEGATASARVRRLAPRSRQAFLLSSLEGLSNDDIAKVMNVDLDAATALLADAESEIEKELRTNVLIIEDESIIAADIEGLVQDLGHTVDTVVATRTEAVKAAKIKKPGIVLADVQLADGSSGIDAVADILADYDVPVIFITAFPERLLTGDKPEPAYLISKPFRPENVKAAISQALFFHSA 257          
BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: A0A420WEK5_9PROT (Response regulator receiver domain-containing protein n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WEK5_9PROT)

HSP 1 Score: 338 bits (866), Expect = 1.520e-114
Identity = 175/256 (68.36%), Postives = 214/256 (83.59%), Query Frame = 1
Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFHD 768
            MSLV+++ P+LPYLRRF+RALTGSQ++GDTYVRTALEAL AG   I ++  PK+AL++MFL IW+++G  LET+   +  +   R+ KLTPASRQAFLL +LE L++ + A VM ++  EA  ++ EAEADIEKELRTNVLI+EDEPIIAADIEGLV ELGHTVDSI+AT  +AV+ A  K+PG+VLADV LADGSSGIDAV DIL ++ VP+IFITAFPE+LLTGDKPEPAYLISKPF P+NVKAAISQALFFH+
Sbjct:    1 MSLVQSFAPHLPYLRRFSRALTGSQSAGDTYVRTALEALVAGNVQISADEDPKLALFKMFLGIWNSSGGVLETDGEEKEQSPSARIRKLTPASRQAFLLSALESLNLDEVAYVMGLSKDEAAALLTEAEADIEKELRTNVLIVEDEPIIAADIEGLVEELGHTVDSIAATRTEAVKAAARKTPGIVLADVQLADGSSGIDAVSDILDEHAVPIIFITAFPEKLLTGDKPEPAYLISKPFNPENVKAAISQALFFHN 256          
BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: A0A520XTI4_9ACTN (Response regulator n=2 Tax=Bacteria TaxID=2 RepID=A0A520XTI4_9ACTN)

HSP 1 Score: 334 bits (857), Expect = 3.670e-113
Identity = 174/255 (68.24%), Postives = 206/255 (80.78%), Query Frame = 1
Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFH 765
            MS  +T+ PYLPYLRRF+RALTGSQ +GDTYVRTAL +L      +D +L PK+AL+RMFL IW++TGA LE     +G    +R+ +LTP SRQAFLL +LEG++  + + VM    AE   ++KEAEADIEKELRTNVLIIEDEPIIAADIEGLV ELGH+VDSI+ATH +AV+ A  K PG+VLADV LADGSSGIDAV +IL   +VPVIFITAFPERLLTG++PEPAYLISKPF+PDNVKAAISQALFFH
Sbjct:    1 MSYADTFAPYLPYLRRFSRALTGSQDTGDTYVRTALISLVEDPTIMDDKLEPKVALFRMFLGIWNSTGALLENKTRPDGDAPAERIRRLTPLSRQAFLLNALEGMTATEISDVMGKPEAEVDALLKEAEADIEKELRTNVLIIEDEPIIAADIEGLVSELGHSVDSIAATHTEAVKAANNKKPGIVLADVQLADGSSGIDAVHEILGGMDVPVIFITAFPERLLTGERPEPAYLISKPFKPDNVKAAISQALFFH 255          
BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: A0A258H4X0_9PROT (Response regulator n=4 Tax=Proteobacteria TaxID=1224 RepID=A0A258H4X0_9PROT)

HSP 1 Score: 300 bits (769), Expect = 9.310e-100
Identity = 157/255 (61.57%), Postives = 198/255 (77.65%), Query Frame = 1
Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFH 765
            MSLV+  GP+LPYLRR+ARALTG+Q SGD+YV+ AL+ALA G   +D +LPP++ALYR+F AIW  TGA+LET     G T   RV ++ P  RQAFLL +LEG +V++ A +++ T      +I  A+ DIE +L T VLIIEDEP+IAADIE LVL+LGH V +++ T  +AV   KA+ PGLVLAD+ LADGSSGIDAV+DIL  ++VPVIFITAFPERLLTG+KPEPA+LI+KPF+P+ VKAAI QALFFH
Sbjct:    1 MSLVQKLGPHLPYLRRYARALTGNQKSGDSYVKAALQALAEGTHELD-DLPPRVALYRLFQAIWGATGARLETAPET-GDTVSDRVLRIPPRHRQAFLLTALEGFTVEECAEILDETSESVRQLISRAQRDIEADLATEVLIIEDEPVIAADIEALVLDLGHRVTTVATTRTEAVAAVKARKPGLVLADIQLADGSSGIDAVNDILRGHDVPVIFITAFPERLLTGEKPEPAFLITKPFQPETVKAAIGQALFFH 253          
BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: A0A7L5Z6Y3_9CAUL (Response regulator n=1 Tax=Brevundimonas sp. TaxID=1871086 RepID=A0A7L5Z6Y3_9CAUL)

HSP 1 Score: 298 bits (762), Expect = 1.190e-98
Identity = 154/255 (60.39%), Postives = 191/255 (74.90%), Query Frame = 1
Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFH 765
            MSL+    P+LPY+RR+ARALTG QASGDTYVR  LEALAAG   + +++ P++ALY +F  IWS+TGA +E  + V G  A  R+ K++P SRQAFLL +L G +  + A ++     +   +I EA+ADI+ EL T+VLIIEDE II+ADIE LV ELGH+V   + THA+AV     + PGLVLAD+ LADGSSGIDAV DIL   NVPVIFITAFPERLLTGD+PEP +LI+KPF+PD VKAAISQALFFH
Sbjct:    1 MSLLARLAPHLPYVRRYARALTGDQASGDTYVRVTLEALAAGERQLPADMTPQVALYHVFHTIWSSTGAXMEDPDPVXGQQASDRLLKISPRSRQAFLLTALXGFTPSEAAQILGADMGQVAQLIAEAQADIDAELATDVLIIEDEAIISADIESLVRELGHSVSGTATTHAEAVEAVSRRRPGLVLADIQLADGSSGIDAVXDILKAINVPVIFITAFPERLLTGDRPEPTFLITKPFQPDTVKAAISQALFFH 255          
BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Match: A0A1R4F2S3_BREDI (DNA-directed RNA polymerase specialized sigma subunit, sigma24-like n=24 Tax=Bacteria TaxID=2 RepID=A0A1R4F2S3_BREDI)

HSP 1 Score: 297 bits (760), Expect = 2.400e-98
Identity = 154/257 (59.92%), Postives = 194/257 (75.49%), Query Frame = 1
Query:    1 MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSELPPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQSLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIAADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGIDAVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQALFFHDS 771
            MSL+    P+LPY+RR+ARALTG Q +GD YVR ALEALAAG   + +++ P++ALY +F  IWS TGAQLE   AVEG  A  R+ +++P SRQAFLL +LEG +  + A ++ V P     +I EA++DI+ EL T+VLIIEDE II+ADIE LV ELGH V   + TH +AV      +PGLVLAD+ LADGSSGIDAV DIL +++VPVIFITAFPERLLTG++PEP +LI+KPF+P+ VKAAISQALFFH S
Sbjct:    1 MSLLARLAPHLPYVRRYARALTGDQTTGDNYVRVALEALAAGERQLPTDMTPRVALYHVFHTIWSATGAQLEDGGAVEGDDAAHRLMRISPRSRQAFLLTALEGFTPSEAAQILAVDPRTVERLIAEAQSDIDAELTTDVLIIEDEAIISADIESLVKELGHRVTGTATTHDEAVDAVARHTPGLVLADIQLADGSSGIDAVKDILKRFDVPVIFITAFPERLLTGERPEPTFLITKPFQPETVKAAISQALFFHPS 257          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100272.80.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00167665F44.370e-12171.76response regulator n=1 Tax=Litorimonas cladophorae... [more]
A0A848V2Q5_9PROT6.960e-12072.37Response regulator n=1 Tax=Hellea sp. TaxID=271569... [more]
UPI0003FD6F418.080e-11971.98response regulator n=1 Tax=Hellea balneolensis Tax... [more]
UPI000379715B1.690e-11871.37response regulator n=1 Tax=Robiginitomaculum antar... [more]
A0A8J3CP60_9PROT2.270e-11670.43Response regulator n=1 Tax=Algimonas arctica TaxID... [more]
A0A420WEK5_9PROT1.520e-11468.36Response regulator receiver domain-containing prot... [more]
A0A520XTI4_9ACTN3.670e-11368.24Response regulator n=2 Tax=Bacteria TaxID=2 RepID=... [more]
A0A258H4X0_9PROT9.310e-10061.57Response regulator n=4 Tax=Proteobacteria TaxID=12... [more]
A0A7L5Z6Y3_9CAUL1.190e-9860.39Response regulator n=1 Tax=Brevundimonas sp. TaxID... [more]
A0A1R4F2S3_BREDI2.400e-9859.92DNA-directed RNA polymerase specialized sigma subu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100272contigP-canaliculata_contig100272:197..970 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score350.9
Seed ortholog evalue5.1e-94
Seed eggNOG ortholog1121948.AUAC01000003_gene2483
Preferred namephyR
EggNOG free text desc.response regulator
EggNOG OGs1MX3Y@1224,2TT2R@28211,43WD0@69657,COG0784@1,COG0784@2
COG Functional cat.T
Best tax levelHyphomonadaceae
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size774
Cds size774
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815575.561413-CDS-P-canaliculata_contig100272:196..9701622815575.561413-CDS-P-canaliculata_contig100272:196..970Pelvetia canaliculata dioeciousCDSP-canaliculata_contig100272 197..970 -
1693494145.9057822-CDS-P-canaliculata_contig100272:196..9701693494145.9057822-CDS-P-canaliculata_contig100272:196..970Pelvetia canaliculata dioeciousCDSP-canaliculata_contig100272 197..970 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100272.80.1prot_P-canaliculata_contig100272.80.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig100272 197..970 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig100272.80.1

>prot_P-canaliculata_contig100272.80.1 ID=prot_P-canaliculata_contig100272.80.1|Name=mRNA_P-canaliculata_contig100272.80.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=258bp
MSLVETYGPYLPYLRRFARALTGSQASGDTYVRTALEALAAGAASIDSEL
PPKIALYRMFLAIWSTTGAQLETNEAVEGSTAVQRVSKLTPASRQAFLLQ
SLEGLSVKDTAAVMNVTPAEAGDMIKEAEADIEKELRTNVLIIEDEPIIA
ADIEGLVLELGHTVDSISATHADAVRNAKAKSPGLVLADVHLADGSSGID
AVDDILSQYNVPVIFITAFPERLLTGDKPEPAYLISKPFEPDNVKAAISQ
ALFFHDS*
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mRNA from alignment at P-canaliculata_contig100272:197..970-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig100272.80.1 ID=mRNA_P-canaliculata_contig100272.80.1|Name=mRNA_P-canaliculata_contig100272.80.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=774bp|location=Sequence derived from alignment at P-canaliculata_contig100272:197..970- (Pelvetia canaliculata dioecious)
ATGAGCCTAGTCGAAACCTATGGTCCGTACCTACCCTATCTCCGTCGCTT TGCGCGGGCGTTGACCGGGTCTCAAGCCTCCGGGGACACCTATGTGCGCA CTGCATTGGAAGCGTTAGCCGCCGGCGCGGCGAGTATTGACAGTGAGTTA CCGCCAAAGATTGCGCTGTACAGAATGTTTCTGGCCATCTGGTCTACAAC GGGCGCGCAGCTGGAAACGAATGAAGCCGTTGAAGGCTCCACTGCCGTGC AGCGGGTCTCCAAATTGACGCCCGCCTCGCGTCAGGCGTTCTTGCTTCAG TCCTTGGAAGGTCTGTCTGTCAAAGATACGGCCGCCGTCATGAACGTCAC ACCCGCCGAGGCCGGCGATATGATCAAGGAAGCGGAAGCCGATATTGAAA AAGAACTTCGCACCAACGTGCTCATCATTGAAGACGAGCCAATCATTGCT GCCGATATTGAAGGCCTCGTTTTAGAGCTCGGCCATACCGTCGACAGCAT TTCCGCCACTCATGCGGATGCCGTACGAAACGCGAAAGCGAAAAGCCCCG GCTTGGTGCTCGCGGATGTTCATCTTGCCGATGGCAGCTCCGGTATTGAC GCTGTTGATGATATTCTGAGCCAATATAATGTCCCGGTCATCTTCATCAC GGCCTTCCCGGAACGCCTGTTGACCGGCGATAAGCCGGAGCCGGCCTATT TGATCTCAAAGCCGTTTGAGCCGGACAATGTGAAAGCGGCAATTAGCCAG GCCTTATTCTTCCACGACTCTTAG
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Coding sequence (CDS) from alignment at P-canaliculata_contig100272:197..970-

>mRNA_P-canaliculata_contig100272.80.1 ID=mRNA_P-canaliculata_contig100272.80.1|Name=mRNA_P-canaliculata_contig100272.80.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1548bp|location=Sequence derived from alignment at P-canaliculata_contig100272:197..970- (Pelvetia canaliculata dioecious)
ATGAGCCTAGTCGAAACCTATGGTCCGTACCTACCCTATCTCCGTCGCTT
TGCGCGGGCGTTGACCGGGTCTCAAGCCTCCGGGGACACCTATGTGCGCA
CTGCATTGGAAGCGTTAGCCGCCGGCGCGGCGAGTATTGACAGTGAGTTA
CCGCCAAAGATTGCGCTGTACAGAATGTTTCTGGCCATCTGGTCTACAAC
GGGCGCGCAGCTGGAAACGAATGAAGCCGTTGAAGGCTCCACTGCCGTGC
AGCGGGTCTCCAAATTGACGCCCGCCTCGCGTCAGGCGTTCTTGCTTCAG
TCCTTGGAAGGTCTGTCTGTCAAAGATACGGCCGCCGTCATGAACGTCAC
ACCCGCCGAGGCCGGCGATATGATCAAGGAAGCGGAAGCCGATATTGAAA
AAGAACTTCGCACCAACGTGCTCATCATTGAAGACGAGCCAATCATTGCT
GCCGATATTGAAGGCCTCGTTTTAGAGCTCGGCCATACCGTCGACAGCAT
TTCCGCCACTCATGCGGATGCCGTACGAAACGCGAAAGCGAAAAGCCCCG
GCTTGGTGCTCGCGGATGTTCATCTTGCCGATGGCAGCTCCGGTATTGAC
GCTGTTGATGATATTCTGAGCCAATATAATGTCCCGGTCATCTTCATCAC
GGCCTTCCCGGAACGCCTGTTGACCGGCGATAAGCCGGAGCCGGCCTATT
TGATCTCAAAGCCGTTTGAGCCGGACAATGTGAAAGCGGCAATTAGCCAG
GCCTTATTCTTCCACGACTCTTAGATGAGCCTAGTCGAAACCTATGGTCC
GTACCTACCCTATCTCCGTCGCTTTGCGCGGGCGTTGACCGGGTCTCAAG
CCTCCGGGGACACCTATGTGCGCACTGCATTGGAAGCGTTAGCCGCCGGC
GCGGCGAGTATTGACAGTGAGTTACCGCCAAAGATTGCGCTGTACAGAAT
GTTTCTGGCCATCTGGTCTACAACGGGCGCGCAGCTGGAAACGAATGAAG
CCGTTGAAGGCTCCACTGCCGTGCAGCGGGTCTCCAAATTGACGCCCGCC
TCGCGTCAGGCGTTCTTGCTTCAGTCCTTGGAAGGTCTGTCTGTCAAAGA
TACGGCCGCCGTCATGAACGTCACACCCGCCGAGGCCGGCGATATGATCA
AGGAAGCGGAAGCCGATATTGAAAAAGAACTTCGCACCAACGTGCTCATC
ATTGAAGACGAGCCAATCATTGCTGCCGATATTGAAGGCCTCGTTTTAGA
GCTCGGCCATACCGTCGACAGCATTTCCGCCACTCATGCGGATGCCGTAC
GAAACGCGAAAGCGAAAAGCCCCGGCTTGGTGCTCGCGGATGTTCATCTT
GCCGATGGCAGCTCCGGTATTGACGCTGTTGATGATATTCTGAGCCAATA
TAATGTCCCGGTCATCTTCATCACGGCCTTCCCGGAACGCCTGTTGACCG
GCGATAAGCCGGAGCCGGCCTATTTGATCTCAAAGCCGTTTGAGCCGGAC
AATGTGAAAGCGGCAATTAGCCAGGCCTTATTCTTCCACGACTCTTAG
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