prot_P-canaliculata_contig97508.23844.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig97508.23844.1
Unique Nameprot_P-canaliculata_contig97508.23844.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length272
Homology
BLAST of mRNA_P-canaliculata_contig97508.23844.1 vs. uniprot
Match: A0A2D5XL47_9BACT (Uncharacterized protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XL47_9BACT)

HSP 1 Score: 112 bits (280), Expect = 2.460e-24
Identity = 69/225 (30.67%), Postives = 114/225 (50.67%), Query Frame = 0
Query:   59 GGADQDLLHWSHWWFLESARFLDIRSHVQGPAAVDGRTAVLDG---------SMAPSRAVVNGRVLPALLELIAAERSDEIISSSLVALGRLVGDDSPEKG--RIHHALRSKLDHSNVKVQESAILGLGLMGSPAAARDLVEIMTASSRGEKFLGTTSVSSRLRSFAAYGLGLSATRLPELGDRQRVALELIEALEGETHGREDFPVAVLGSLGLVDLGARMNVP 272
            G A  DL  W  WW      +L+++SH+       G      G         ++ P++  ++  V+PALLE +A ER ++I++ +++AL + +GD+  E G  R    +   LD S+ ++ E+A + LG++    +   LVE+M     G K +G+T VS R R+FAAYGLGL   R  +   R+++A  L + L        D  +A + + GL  + A   VP
Sbjct:   97 GDAGPDLTRWDFWWGFNKDPYLNLKSHIHDGNIQTGSAEFFLGHGQKEQAKETLRPTKEQIDNVVVPALLEALAKERHNDIVTGAMIALAK-IGDEQDESGESRFQKEIMKFLDDSSQEIAETAAVALGILADEGSIDILVELMNDGPIGRKAVGSTQVSLRTRAFAAYGLGLLGYRSGDNELRKQIAEHLADVLTSPNFATRDIKIAAMVAFGLTRVDAVEAVP 320          
BLAST of mRNA_P-canaliculata_contig97508.23844.1 vs. uniprot
Match: A0A523PBK3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PBK3_9BACT)

HSP 1 Score: 92.4 bits (228), Expect = 1.750e-17
Identity = 70/218 (32.11%), Postives = 106/218 (48.62%), Query Frame = 0
Query:   60 GADQDLLHWSHWWFLESARFLDIRSHVQGPAAVDGRTAVLDGSMAP--------SRAVVNGRVLPALLELIAAERSDEIISSSLVALGRLVGDDSPEKGRIHHALRSKLDHSNVKVQESAILGLGLMGSPAAARDLVEIMTASSRGEKFLGTTSVSSRLRSFAAYGLGLSATRLPELGDRQRVALELIEA-LEGETHGREDFPVAVLGSLGLVDLGAR 268
            GA  D   WS WW     ++LD+R  +   A    RTA  +G +A         +R +V G ++P LL ++   + D ++ ++L+AL R +GD       +     S L      V E+A++ LG +GSPAAAR L E+      G K  G   V  R R+ AAYGLGL+ + L E  +  R A+  + A L  +     D   A + +LG ++L  R
Sbjct:   83 GASPDFSSWSVWWEHNRDQYLDLRGKL---ALAHSRTAHDEGVLAGFAERRPGLTRELVYGEIVPELLHVLRQGKDDYLVRTALIALAR-IGDGEVGAETLTPIFTSFLKGEPRAVAETAVIALGALGSPAAARVLAELARDGDAGRKACGERRVPVRTRALAAYGLGLTGS-LRERPELARFAVHHLAAVLSADARAYPDLQAACVIALGTIELEDR 295          
BLAST of mRNA_P-canaliculata_contig97508.23844.1 vs. uniprot
Match: A0A7V7MHX3_9BACT (HEAT repeat domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V7MHX3_9BACT)

HSP 1 Score: 72.8 bits (177), Expect = 7.780e-11
Identity = 56/210 (26.67%), Postives = 99/210 (47.14%), Query Frame = 0
Query:   64 DLLHWSHWWFLESARFLDIRSHVQGPAAVDGRTAVLDG---------SMAPSRAVVNGRVLPALLELIAAERSDEIISSSLVALGRLVGDDSPEKGRIHHALRSKLDHSNVKVQESAILGLGLMGSPAAARDLVEIMTASSRGEKFLGTT-SVSSRLRSFAAYGLGLSATRLPELGDRQRVALELIEALEGETHGREDFPVAVLGSLGLV 263
            D   W +WW   +  +LD+R  V  P    G +  L G         +  P+   +   +LPAL   + + + D I++ S++AL ++  D           L+ +L+     + E+A L  G++ SP A   L++++  + +G +  G    V+ R+RSFAAYGLGL    L +   +  +   L + L    H  +D  V+ + +LGL+
Sbjct:   84 DTTGWEYWWNFNADPYLDLRRKVFEPRPETGTSDALTGLKESAVKTPAFRPTNYRIERDLLPALEAGLKSGKKD-IVTGSMLALAKIGHDPERMVSLFRPFLKEELE-----IAETAALACGILQSPKALDTLIDLVRDTPQGRRMTGREIQVNPRVRSFAAYGLGLIGHELDKAPLKSYLQSILWDNLTRTDHASQDLAVSCVIALGLL 287          
BLAST of mRNA_P-canaliculata_contig97508.23844.1 vs. uniprot
Match: A0A800MEC7_9BACT (Uncharacterized protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800MEC7_9BACT)

HSP 1 Score: 63.2 bits (152), Expect = 1.300e-7
Identity = 64/219 (29.22%), Postives = 97/219 (44.29%), Query Frame = 0
Query:   59 GGADQDLLHWSHWWFLESARF--------LDI--RSHVQGPAAVDGRTAVLDGSMAPSRAVVNGRVLPALLELIAAER-SDEIISSSLVALGRLVGDDSPEKGRIHHALRSK-LDHSNVKVQESAILGLGLMGSPAAARDLVEIMTASSRGEKFLGTTSVSSRLRSFAAYGLGLSATRLPELGDRQRVALELIEALEGETHGREDFPVAVLGSLGLVDL 265
            GG D D   W  +W L    F        LD+  R+      A+D R  V +G                L+EL+       E+   +L+ALGR  G    E G +  A+ SK L +SN+KV E+A+  +   GS  A   L +++  +  G+  +G+TSV  RLR+FAAYG+G++    P    R      L E L        D   A++  + ++ L
Sbjct:   97 GGPDPD--DWMGFWSLHRDLFSRPDFKTQLDLTPRTGQDRDQAIDRRREVAEG----------------LIELLRKPNMGPELTHEALIALGRC-GKPGEEAGGV--AVASKFLSNSNIKVTEAAVTSIAGQGSGEALVLLRDLLFETREGKALVGSTSVPLRLRTFAAYGIGIACMNEPRPAMRTFGVQALSEVLLTNAKRSRDLSSALVLGMSVIPL 294          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97508.23844.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2D5XL47_9BACT2.460e-2430.67Uncharacterized protein n=2 Tax=Planctomycetes bac... [more]
A0A523PBK3_9BACT1.750e-1732.11Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A7V7MHX3_9BACT7.780e-1126.67HEAT repeat domain-containing protein n=1 Tax=Plan... [more]
A0A800MEC7_9BACT1.300e-729.22Uncharacterized protein n=2 Tax=Planctomycetes bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 106..267
e-value: 7.8E-7
score: 30.5
IPR011030Lipovitellin-phosvitin complex, superhelical domainSUPERFAMILY48431Lipovitellin-phosvitin complex, superhelical domaincoord: 104..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97508contigP-canaliculata_contig97508:241..1056 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97508.23844.1mRNA_P-canaliculata_contig97508.23844.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig97508 241..1056 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig97508.23844.1 ID=prot_P-canaliculata_contig97508.23844.1|Name=mRNA_P-canaliculata_contig97508.23844.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=272bp
SASPGRPFTPRPAPGVSRPASSPRPSAPTPGPAPASSPRSPGTVHAPKVP
GATSRISHGGADQDLLHWSHWWFLESARFLDIRSHVQGPAAVDGRTAVLD
GSMAPSRAVVNGRVLPALLELIAAERSDEIISSSLVALGRLVGDDSPEKG
RIHHALRSKLDHSNVKVQESAILGLGLMGSPAAARDLVEIMTASSRGEKF
LGTTSVSSRLRSFAAYGLGLSATRLPELGDRQRVALELIEALEGETHGRE
DFPVAVLGSLGLVDLGARMNVP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR011030Lipovitellin_superhlx_dom