prot_P-canaliculata_contig9717.23801.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9717.23801.1
Unique Nameprot_P-canaliculata_contig9717.23801.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length583
Homology
BLAST of mRNA_P-canaliculata_contig9717.23801.1 vs. uniprot
Match: A0A6H5KCR0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR0_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 1.430e-90
Identity = 186/444 (41.89%), Postives = 254/444 (57.21%), Query Frame = 0
Query:    1 MTFLVILQPLLVWLGCGKLRAMERSVANQAVWWHSFRSFLFAYVFLVPKDDREPGFWLLWFSCSGLLVLLETIAAVHFEHVVDNPRFGVMHSLRAFSFLILVLSACTRLMMIGWDEFYDWGQGPVGRILLSPNYPAGIGG-----GGSDSGDAWTG--------PRRGGMGFALVLLYDLVVIGMDVSVSVLKYMINLADILIDPNTACSQEVELTELVTLSVRLCQSVLDVGRMLFLFQYCGDWPLIRKILARVVAITTIARAVDRTLRATAKMIRGRGLDSNFQNASQAELKSMAADEACAICLKAMKSAKRLDCHHFFHSGCLRRYLNSCKGGDYLCPICRAKIEWHPSGATNLKRNATTG-----------------RLGDRHPNHDALPQRNSLRPNLAQGPVFGGNVRTPDSLSRAARRADATLRLGRRFAQAWLGDG 414
            + FL I+Q  LV L CGKL+ +ER+ A  AV    + SFLF  V L P+D RE   WLLWFS +GLL +LET+   HFEHVV+NPRFGV H+LR       VL     L  +GW+EF++WG GP+G+ILLSP+ PA + G      G+D G ++ G        P RGG GFAL+LLYDL V   +V +S LKY+ NL ++  DP++A ++E  L + V  + RL Q++L   R +++F+ CG    +RK+  RV++     +  +R   A  +++  R +D  F +A++ ELK+MAADE+CAICLK M SAKRL+C HFFH+GCLR+YLN+    + LCPICRA I W+P+   N   N   G                                      LA GP   G   TPD  SRAAR AD+ +R+ R+  +  L  G
Sbjct:   50 LVFLWIVQGALVRLCCGKLKPVERARATAAVLGKVWSSFLFVNVVLAPEDVREWLLWLLWFSSTGLLKMLETVGKGHFEHVVENPRFGVGHTLRTLGLHAAVLYLGAHLARLGWNEFFEWGGGPIGQILLSPS-PAVVDGDVIELNGND-GYSYFGAAASTSAHPERGGTGFALLLLYDLAVTATEVGLSALKYVTNLLELHKDPDSAYTEEGCLEQTVFFT-RLGQAILGASRTIYMFKSCGHCAFVRKVCIRVMSTINGGQTFNRIHSAACRLVLAREMDVAFPDATEQELKTMAADESCAICLKTMTSAKRLECQHFFHAGCLRQYLNTSARTEPLCPICRAPISWNPTAGGNKPVNRGEGDHLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAFGPAVNGPP-TPDGFSRAARGADSVVRVVRQMLRLGLTGG 489          
BLAST of mRNA_P-canaliculata_contig9717.23801.1 vs. uniprot
Match: D8LFG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG6_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 5.350e-69
Identity = 139/313 (44.41%), Postives = 195/313 (62.30%), Query Frame = 0
Query:    1 MTFLVILQPLLVWLGCGKLRAMERSVANQAVWWHSFRSFLFAYVFLVPKDDREPGFWLLWFSCSGLLVLLETIAAVHFEHVVDNPRFGVMHSLRAFSFLILVLSACTRLMMIGWDEFYDWGQGPVGRILLSPNYPAGIGG-----GGSD-------SGDAWTGPRRGGMGFALVLLYDLVVIGMDVSVSVLKYMINLADILIDPNTACSQEVELTELVTLSVRLCQSVLDVGRMLFLFQYCGDWPLIRKILARVVAITTIARAVDRTLRATAKMIRGRGLDSNFQNASQAELKSMAADEACAICLKAMKSAKR 301
            + FL I+Q  L+ L CGKL+ +ER+ A   V    + SFLF  V L P+D RE   WLLWFS +GLL +LET+   HFEHVV+NPRFGV H+LR       VL     L  +GW+EF++WG GP+G+ILLSP+ PA + G      G+D       +    T P RGG GFAL+LLYDL VI  +V +S LKY  NL ++  DP++A ++E  L + V  + RL Q++L   R +++F+ CG   L+RK+  R+++     +  +R   A  +++  R +D  F +A++ ELK+MAADE+CAICLK M SAKR
Sbjct:   50 LVFLWIVQGALIRLCCGKLKPVERARATATVLGKVWSSFLFVNVVLAPEDVREWLLWLLWFSSTGLLKMLETVGKEHFEHVVENPRFGVGHTLRTLGLHAAVLYLGAHLARLGWNEFFEWGGGPIGQILLSPS-PAVVDGDVIELNGNDGYGYFGAAASTSTDPERGGTGFALLLLYDLAVIATEVGLSALKYTSNLLELHKDPDSAYTEEGSLEQTVFFT-RLGQAILGASRTVYMFKSCGHCALVRKVCIRIMSTINGGQTFNRIHSAACRIVLAREMDVAFPDATEQELKTMAADESCAICLKTMTSAKR 360          
BLAST of mRNA_P-canaliculata_contig9717.23801.1 vs. uniprot
Match: UPI000EF525A3 (E3 ubiquitin-protein ligase AMFR isoform X1 n=2 Tax=Ciona intestinalis TaxID=7719 RepID=UPI000EF525A3)

HSP 1 Score: 80.1 bits (196), Expect = 5.800e-12
Identity = 76/343 (22.16%), Postives = 138/343 (40.23%), Query Frame = 0
Query:   17 GKLRAMERSVANQAVWWHSFRSFLFAYVFLVPKDDREPGFWLLWFSCSGLLVLLETIAAVHFEHVVDNPRFGVMHSLRAFSFLILVLSACTRLMMIGWDEFYDWGQGPVGRILLSPNYPAGIGGGGSDSGDAWTGPRRGGMGFALVLLYDLVVIGMDVSVSVLKYMINLADILIDPNTACSQEVELTELVTLSVRLCQSVLDVGRMLFLFQYCGDWPLIRKILARVVAITTIARAVDRTLRATAKMIRGRGLDSNFQNASQAELKSMAADEACAICLKAMKSAKRLDCHHFFHSGCLRRYLNSCKGGDYLCPICRAKIEWHPSGATNLKRNATTGRLGDRHPN 359
            GKLRA+ER       W   F  F+F +  +  +   E   W+ WF+    L+LL  +    FE +  +P   + +  +    +  ++S C  L               V  +  S  + A             + P    +     +L + ++I +     +++Y I+L DI  D      ++  L   V LS+ L    ++    L +      W  +  ++  +      +    R LR          +++ F  A++ E+++   ++ CAIC + M++A++L C HFFHS CLR +L      D  CP CR +++   +   N+        L D  PN
Sbjct:  207 GKLRAIERQHMRDKFWNFVFYKFIFIFGVMNVQSLNEVIVWISWFTAIAFLLLLTKLCKDRFEFLSFSPNTPMYYHWKVLGLMGFIISCCLLLT--------------VSCVTKSFMFQA-------------SSPSYSDIHSITFMLAECLIITVKSLHVIIRYCIHLYDIQHDE--LWERKATLVYHVDLSMELLSLSINFVHHLHMLFSGNIWLSMASLVICMQLRYIFSEIQKRLLRHKNYRRVVANMEAQFPEATKEEIEAQ--EDQCAICWEQMETARKLPCGHFFHSPCLRSWLEQ----DTTCPTCRKQLDIRNTNRRNVPVMLGPDVLNDTAPN 514          
BLAST of mRNA_P-canaliculata_contig9717.23801.1 vs. uniprot
Match: H2Y5L0_CIOSA (Uncharacterized protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Y5L0_CIOSA)

HSP 1 Score: 77.8 bits (190), Expect = 1.450e-11
Identity = 79/331 (23.87%), Postives = 134/331 (40.48%), Query Frame = 0
Query:   17 GKLRAMERSVANQAVWWHSFRSFLFAYVFLVPKDDREPGFWLLWFSCSGLLVLLETIAAVHFEHVVDNPRFGVMHSLRAFSFLILVLSACTRLMMIGWDEFYDWGQGPVGRILLSPNYPAGIGGGGSDSGDAWTGPRRGGMGFALVLLYDLVVIGMDVSVSVLKYMINLADI----LIDPNTACSQEVEL-TELVTLSVRLCQSVLDVGRMLFLFQYCGDWPLIRKILARVVAITTIARAVDRTL-------RATAKMIRGRGLDSNFQNASQAELKSMAADEACAICLKAMKSAKRLDCHHFFHSGCLRRYLNSCKGGDYLCPICRAKIE 335
            GKLR++E        W   F  F+F +  +  +   E   W+ WF+C   L+LL  +    FE++  +P   + +  +    L+ ++S C  L +        +      R   S                         M     +L + V++       +++Y I+L DI    L +        V+L  EL+TLS      +     MLF     G+  L    L   + +  I   + + L       R  A M      ++ F  AS+ E+++   ++ CAIC + M++A++L C HFFHS CLR +L      D  CP CR +++
Sbjct:   22 GKLRSIEYQHMRDKFWNFVFYKFIFIFGVMNVQSLNEVLVWMSWFTCIAFLLLLTKLCKDRFEYLSFSPNTPMYYHWKVLGLLVFIISCCLLLTVSCLTSSLMF---HTSRTSYSD------------------------MHSMTFMLAECVIVTTKALHVIMRYGIHLYDIQHEDLWERKATLVYHVDLFMELLTLSTNFLHHL----HMLF----SGNIWLSMASLVICMQLRYIFSEIQKRLLRHKNYRRVVANM------EAQFPQASREEIEAQ--EDQCAICWEPMENARKLPCGHFFHSACLRSWLEQ----DTTCPTCRKQLD 305          
BLAST of mRNA_P-canaliculata_contig9717.23801.1 vs. uniprot
Match: H2Y5L1_CIOSA (Uncharacterized protein n=3 Tax=Ciona savignyi TaxID=51511 RepID=H2Y5L1_CIOSA)

HSP 1 Score: 77.0 bits (188), Expect = 4.140e-11
Identity = 79/331 (23.87%), Postives = 133/331 (40.18%), Query Frame = 0
Query:   17 GKLRAMERSVANQAVWWHSFRSFLFAYVFLVPKDDREPGFWLLWFSCSGLLVLLETIAAVHFEHVVDNPRFGVMHSLRAFSFLILVLSACTRLMMIGWDEFYDWGQGPVGRILLSPNYPAGIGGGGSDSGDAWTGPRRGGMGFALVLLYDLVVIGMDVSVSVLKYMINLADI----LIDPNTACSQEVEL-TELVTLSVRLCQSVLDVGRMLFLFQYCGDWPLIRKILARVVAITTIARAVDRTL-------RATAKMIRGRGLDSNFQNASQAELKSMAADEACAICLKAMKSAKRLDCHHFFHSGCLRRYLNSCKGGDYLCPICRAKIE 335
            GKLR++E        W   F  F+F +  +  +   E   W+ WF+C   L+LL  +    FE++  +P   + +  +    L+ ++S C  L +                 L S                         M     +L + V++       +++Y I+L DI    L +        V+L  EL+TLS      +     MLF     G+  L    L   + +  I   + + L       R  A M      ++ F  AS+ E+++   ++ CAIC + M++A++L C HFFHS CLR +L      D  CP CR +++
Sbjct:  107 GKLRSIEYQHMRDKFWNFVFYKFIFIFGVMNVQSLNEVLVWMSWFTCIAFLLLLTKLCKDRFEYLSFSPNTPMYYHWKVLGLLVFIISCCLLLTV---------------SCLTSSLID---------------------MHSMTFMLAECVIVTTKALHVIMRYGIHLYDIQHEDLWERKATLVYHVDLFMELLTLSTNFLHHL----HMLF----SGNIWLSMASLVICMQLRYIFSEIQKRLLRHKNYRRVVANM------EAQFPQASREEIEAQ--EDQCAICWEPMENARKLPCGHFFHSACLRSWLEQ----DTTCPTCRKQLD 381          
BLAST of mRNA_P-canaliculata_contig9717.23801.1 vs. uniprot
Match: F6VAW2_CIOIN (Uncharacterized protein n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F6VAW2_CIOIN)

HSP 1 Score: 75.1 bits (183), Expect = 1.700e-10
Identity = 75/351 (21.37%), Postives = 136/351 (38.75%), Query Frame = 0
Query:   17 GKLRAMERSVANQAVWWHSFRSFLFAYVFLVPKDDREPGFWLLWFSCSGLLVLLETIAAVHFEHVVDNPRFGVMHSLRAFSFLILVLSACTRLMMIGWDEFYDWGQGPVGRILLSPNYPAGIGGGGSDSGDAWTGPRRGGMGFALVLLYDLVVIGMDVSVSVLKYMINLADILIDPNTACSQEVELTELVTLSVRLCQSVLDVGRMLFLFQYCGDWPLIRKILARVVAITTIARAVDRTLRATAKMIRGRGLDSNFQNASQAELKSMAADEACAICLKAMKSAKRLDCHHFFHSGCLRRYLNSCKGGDYLCPICRAKIEWHPSGATNLKRNATTGRLGDRHPNHDALPQRN 367
            GKLRA+ER       W   F  F+F +  +  +   E   W+ WF+    L+LL  +    FE +  +P   + +  +    +  ++S C  L               V  +  S  + A             + P    +     +L + ++I +     +++Y I+L DI  D      ++  L   V LS+ L    ++    L +      W  +  ++  +      +    R LR          +++ F  A++ E+++   ++ CAIC + M++A++L C HFFHS CLR +L      D  CP C   + +           A     G R+     +  RN
Sbjct:  110 GKLRAIERQHMRDKFWNFVFYKFIFIFGVMNVQSLNEVIVWISWFTAIAFLLLLTKLCKDRFEFLSFSPNTPMYYHWKVLGLMGFIISCCLLLT--------------VSCVTKSFMFQA-------------SSPSYSDIHSITFMLAECLIITVKSLHVIIRYCIHLYDIQHDE--LWERKATLVYHVDLSMELLSLSINFVHHLHMLFSGNIWLSMASLVICMQLRYIFSEIQKRLLRHKNYRRVVANMEAQFPEATKEEIEAQ--EDQCAICWEQMETARKLPCGHFFHSPCLRSWLEQ----DTTCPTCSIALSFSHENKPKNSHPAPNPAAGARNQAPGVVQHRN 425          
BLAST of mRNA_P-canaliculata_contig9717.23801.1 vs. uniprot
Match: UPI001F9B49F3 (Uncharacterized protein n=2 Tax=Dermatophagoides farinae TaxID=6954 RepID=UPI001F9B49F3)

HSP 1 Score: 75.1 bits (183), Expect = 1.880e-10
Identity = 84/378 (22.22%), Postives = 146/378 (38.62%), Query Frame = 0
Query:    2 TFLVILQPLLVW-------------------LGCGKLRAMERSVANQAVWWHSFRSFLFAYVFLVPKDDREPGFWLLWFSCSGLLVLLETIAAVHFEHVVDNPRFGVMHSLRAFSFLILVLSACTRLMMIGWDEFYDWGQGPVGRILLSPNYPAGIGGGGSDSGDAWTGPRRGGMGFALVLLYDLVVIGMDVSVSVLKYMINLADILIDP----NTACSQEVELT-ELVTLSVRLCQSVLDVGRMLFLFQYCGDWPLIRKILARVVAITTIARAVDRTLRATAKMIRGRGL-DSNFQNASQAELKSMAADEACAICLKAMKSAKRLDCHHFFHSGCLRRYLNSCKGGDYLCPICRAKIEWHPSGATNLKRNATTGRLG 354
            T+++I +PL VW                   L  G LRA E+ +     W      F+F +  +  +   E   W  WFS  G + LL  +    +  + + P       ++  + L+ +L +   L +IG              +++  +    IG                       L+ ++ +I +     ++ Y+I+L D+  D      TA    +EL  +L  LS+  C  +  +          G+  L    +  ++ + +I   + R L+     ++   L + NF  A++ EL     D  CAIC   M++A+RL C HFFH+ CLR +L      D  CP CR  +       ++    A  GR G
Sbjct:  152 TYIMIHEPLCVWTLINMSYCLLILFGKLIQKLVFGDLRASEQQLLRDKFWNFLLYKFIFVFSVINVQYMDELILWCAWFSVLGFMFLLTNLCKERYSFLANTPTISRFEHIKLLTLLVSILMSTLPLFIIG--------------VIVGNHTSLSIG---------------------AFLICEVSIISLRSLQCLILYIIHLCDLRRDSIWEKRTAIIYYIELIFDLSVLSIDFCHHIHMLSS--------GNIILSVSSVVILIQLRSIFTDIIRRLKKHRNYLQVLNLMEENFPTATRDELTDENND--CAICWDRMENARRLPCGHFFHTACLRSWLEQ----DTSCPTCRHSLRQRDQNRSSS--TAIDGRSG 478          
BLAST of mRNA_P-canaliculata_contig9717.23801.1 vs. uniprot
Match: A0A6P6Y7V7_DERPT (E3 ubiquitin-protein ligase AMFR-like n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6Y7V7_DERPT)

HSP 1 Score: 70.9 bits (172), Expect = 3.960e-9
Identity = 72/332 (21.69%), Postives = 134/332 (40.36%), Query Frame = 0
Query:    4 LVILQPLLVWLGCGKLRAMERSVANQAVWWHSFRSFLFAYVFLVPKDDREPGFWLLWFSCSGLLVLLETIAAVHFEHVVDNPRFGVMHSLRAFSFLILVLSACTRLMMIGWDEFYDWGQGPVGRILLSPNYPAGIGGGGSDSGDAWTGPRRGGMGFALVLLYDLVVIGMDVSVSVLKYMINLADILIDPNTACSQEVELTELVTLSVRLCQSVLDVGRMLFLFQYCGDWPLIRKILARVVAITTIARAVDRTLRATAKMIRGRGL-DSNFQNASQAELKSMAADEACAICLKAMKSAKRLDCHHFFHSGCLRRYLNSCKGGDYLCPICRAKI 334
            L++   L+  L  G LR+ E+ +     W      F+F +  +  +   E   W  WFS  G + LL  +    +  + + P    +  ++  + LI +L +   L +IG            G + +  ++  G                         LL ++ ++ +     ++ Y+I+L D+  D  +   +   +   + L   L   V+D    + +    G+  L    +  ++ + +I   + R ++     ++   L + NF  AS+ EL     D  CAIC   M++A+RL C HFFH+ CLR +L      D  CP CR  +
Sbjct:  168 LILFGKLIQKLVFGDLRSSEQQLLRDKFWNFLLYKFIFVFSVINVQHMNELLLWCAWFSVLGFMFLLTNLCKARYRFLANTPTISRLAHIKLLTLLISILISTLPLFIIG------------GIVGIHTSFSIGA-----------------------FLLCEVSMLSLRALHCLILYIIHLWDLSRD--SIWEKRTTIVYYIELIFDLSVLVIDFCHHIHMLS-SGNIILSVSSVVILIQLRSIFTDIIRRIKKHRNYLQVLNLMERNFPAASRDELNDENND--CAICWDRMENARRLPCGHFFHTACLRSWLEQ----DTSCPTCRHSL 455          
BLAST of mRNA_P-canaliculata_contig9717.23801.1 vs. uniprot
Match: A0A7S0RNL6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RNL6_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 6.700e-9
Identity = 58/195 (29.74%), Postives = 91/195 (46.67%), Query Frame = 0
Query:  153 RRGGMGFALVLLYDLVVIGMDVSVSVLKYMINLADILIDPNTACSQEVELTELVTLSVRLCQSVLDVGRM-LFLFQYCGDWPLIRKILARVVAITTIARAVDRTLRATAKMIRGR------------GLDSNFQNASQAELKSMAADEACAICLKAMKSAKRLDCHHFFHSGCLRRYLNSCKGGDYLCPICRAKI 334
            +  G+   ++LL+++VVIGMDV  + L+Y +NL +       A   + + TEL    +   + + D   + L L  Y   W L        VA   I   +   ++  A  ++GR             L   F +A++A+L     ++ CAIC + M +AKRL C H FH  CLR +L      +Y CP CRA +
Sbjct:  219 QHAGLSEKMLLLFEVVVIGMDVLQTSLRYALNLMEA-----WAEDADPQATELRGTLLYHSEFLADCACLSLTLVHYAHIWWL------HGVAFQLIDAILFLNIKTLAANLKGRFRGFLHYREATRNLREAFPDATEAQLALF--NDECAICKEGMATAKRLPCGHLFHLPCLRSWLEQGTSDNYTCPTCRASL 400          
BLAST of mRNA_P-canaliculata_contig9717.23801.1 vs. uniprot
Match: A0A1Y3BBZ9_EURMA (E3 ubiquitin-protein ligase AMFR-like protein (Fragment) n=1 Tax=Euroglyphus maynei TaxID=6958 RepID=A0A1Y3BBZ9_EURMA)

HSP 1 Score: 67.4 bits (163), Expect = 4.100e-8
Identity = 78/353 (22.10%), Postives = 134/353 (37.96%), Query Frame = 0
Query:    2 TFLVILQPLLVW-------------------LGCGKLRAMERSVANQAVWWHSFRSFLFAYVFLVPKDDREPGFWLLWFSCSGLLVLLETIAAVHFEHVVDNPRFGVMHSLRAFSFLILVLSACTRLMMIGWDEFYDWGQGPVGRILLSPNYPAGIGGGGSDSGDAWTGPRRGGMGFALVLLYDLVVIGMDVSVSVLKYMINLADILIDPNTACSQEVELTELVTLSVRLCQSVLDVGRMLFLFQYCGDWPLIRKILARVVAITTIARAVDRTLRATAKMIRGRGL-DSNFQNASQAELKSMAADEACAICLKAMKSAKRLDCHHFFHSGCLRRYLNSCKGGDYLCPICRAKI 334
            T+++I +PL VW                   L  G+LR  E+ +     W      F+F +  +  +   E   W  WFS  G + LL  +    F  +++ P    +  ++  + LI +L +   L +I                L+  +    IG                     + L  ++ +I +     ++ Y+I+L D+  D  T   +   +   + L   L    +D    + +    G+  L    +  +  + TI   + R +R     ++   L + NF   S  EL     D  CAIC   M++A+RL C HFFH+ CLR +L      D  CP CR  +
Sbjct:   38 TYIMIHEPLCVWTLINMSYCLLILFGKLIQKLVFGELRQSEQQLLRDKFWNFLLYKFIFVFSVINVQYMDELILWCAWFSILGFMFLLTNLCKERFSFLMNTPTISRIEHIKLLTLLISLLISTLPLFIIA--------------CLVGYHTSFSIG---------------------IFLFCEISLISLRTLQCLILYLIHLWDLRHD--TIWEKRTAIIYYIELIFDLSVLFIDFSHHIHMLS-SGNIILSVSSVVILFQLRTIFIDIIRRIRKHRNYLQVLNLMEENFPTTSPDELNDENND--CAICWDRMENARRLPCGHFFHTACLRSWLEQ----DTSCPTCRHSL 346          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9717.23801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5KCR0_9PHAE1.430e-9041.89RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LFG6_ECTSI5.350e-6944.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000EF525A35.800e-1222.16E3 ubiquitin-protein ligase AMFR isoform X1 n=2 Ta... [more]
H2Y5L0_CIOSA1.450e-1123.87Uncharacterized protein n=1 Tax=Ciona savignyi Tax... [more]
H2Y5L1_CIOSA4.140e-1123.87Uncharacterized protein n=3 Tax=Ciona savignyi Tax... [more]
F6VAW2_CIOIN1.700e-1021.37Uncharacterized protein n=1 Tax=Ciona intestinalis... [more]
UPI001F9B49F31.880e-1022.22Uncharacterized protein n=2 Tax=Dermatophagoides f... [more]
A0A6P6Y7V7_DERPT3.960e-921.69E3 ubiquitin-protein ligase AMFR-like n=1 Tax=Derm... [more]
A0A7S0RNL6_9CHLO6.700e-929.74Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A1Y3BBZ9_EURMA4.100e-822.10E3 ubiquitin-protein ligase AMFR-like protein (Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 289..330
e-value: 3.2E-6
score: 36.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 288..331
e-value: 8.0E-8
score: 32.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 289..331
score: 11.973
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 265..339
e-value: 1.2E-14
score: 55.4
NoneNo IPR availablePANTHERPTHR15067:SF5E3 UBIQUITIN-PROTEIN LIGASE AMFRcoord: 2..114
coord: 268..533
NoneNo IPR availablePANTHERPTHR15067FAMILY NOT NAMEDcoord: 2..114
coord: 268..533
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..183
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 184..582
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..21
score: 0.517
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 285..337
NoneNo IPR availableTMHMMTMhelixcoord: 157..179
NoneNo IPR availableTMHMMTMhelixcoord: 92..114
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 30..47
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 289..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9717contigP-canaliculata_contig9717:3795..8244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9717.23801.1mRNA_P-canaliculata_contig9717.23801.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9717 3664..9993 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9717.23801.1 ID=prot_P-canaliculata_contig9717.23801.1|Name=mRNA_P-canaliculata_contig9717.23801.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=583bp
MTFLVILQPLLVWLGCGKLRAMERSVANQAVWWHSFRSFLFAYVFLVPKD
DREPGFWLLWFSCSGLLVLLETIAAVHFEHVVDNPRFGVMHSLRAFSFLI
LVLSACTRLMMIGWDEFYDWGQGPVGRILLSPNYPAGIGGGGSDSGDAWT
GPRRGGMGFALVLLYDLVVIGMDVSVSVLKYMINLADILIDPNTACSQEV
ELTELVTLSVRLCQSVLDVGRMLFLFQYCGDWPLIRKILARVVAITTIAR
AVDRTLRATAKMIRGRGLDSNFQNASQAELKSMAADEACAICLKAMKSAK
RLDCHHFFHSGCLRRYLNSCKGGDYLCPICRAKIEWHPSGATNLKRNATT
GRLGDRHPNHDALPQRNSLRPNLAQGPVFGGNVRTPDSLSRAARRADATL
RLGRRFAQAWLGDGTHDARARTRATAVGPGVAQSGRAVATVAASGGAGRE
ARAANEISTFPFLGGPLSYETRPNRREQWGEGMAGEGSTAAFTEIGAIAH
HLLEIFPGMSRQVALRSARMARGSVERAVELVLLMPSESTDGVMSTSGSV
PESDARVARGEEVGVSGVVRESPQATTFRRRW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR013087Znf_C2H2_type