prot_P-canaliculata_contig9716.23799.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9716.23799.1
Unique Nameprot_P-canaliculata_contig9716.23799.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length372
Homology
BLAST of mRNA_P-canaliculata_contig9716.23799.1 vs. uniprot
Match: A0A6H5L6Y2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y2_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 1.380e-105
Identity = 171/265 (64.53%), Postives = 211/265 (79.62%), Query Frame = 0
Query:  103 EDKSKSVLVEAAEIMAARGESDAASADRAYRLLNAERDALRESGGGDGDDETLSS--SMTKATAAALLSWIRCKTEGNGLMVTEDGRVTTSDTADRRELWATHAPRVLQLLDEVGQEPASDAELQQLYIEAIMYSMSCQGIPEAFVTGKTLAFTSAMDVLVKDFPAQDNGVAHIFQGSYFLAAPWPIRSPRKACKSFEKAVKVNGRSRRNVYYAGVGKLACGDRKGAAEMFRRAVSDEHCESASATERDIAGALREQSKRGLALC 365
            E  SK+   EAAE MA+RGESD A+A  AYRLL+AE  A   +   DG   T +S  +++++ A ALLSWIRC T GNGL+V + G+  TSDT +RRELW  HAPRVLQL+ E G+EP+SD ELQQ++ EA+MYS++ QG+ EA V+GK LAFTSAM+VLVK +P QDNGVA IFQGSY+LAAPWP+RSP KA  S+EKAV VNGRSRRNVYYAG+G+LACGD++GAAEMFRRAVSD+ CE+AS TERD+A +LREQ++RGL  C
Sbjct:  231 EGSSKTAEKEAAEAMASRGESDTAAAQHAYRLLDAELTAAA-AASHDGPPPTKASVATLSRSAAGALLSWIRCSTAGNGLIVADGGKAATSDTVERRELWGKHAPRVLQLVKESGEEPSSDPELQQIFTEAVMYSVATQGVVEAIVSGKALAFTSAMNVLVKKYPTQDNGVAFIFQGSYYLAAPWPLRSPTKARDSYEKAVNVNGRSRRNVYYAGLGRLACGDKRGAAEMFRRAVSDDQCENASPTERDVAVSLREQAQRGLDFC 494          
BLAST of mRNA_P-canaliculata_contig9716.23799.1 vs. uniprot
Match: D8LSB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB7_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 1.640e-40
Identity = 81/144 (56.25%), Postives = 106/144 (73.61%), Query Frame = 0
Query:  112 EAAEIMAARGESDAASADRAYRLLNAERDALRESG-GGDGDDETLSS-----SMTKATAAALLSWIRCKTEGNGLMVTEDGRVTTSDTADRRELWATHAPRVLQLLDEVGQEPASDAELQQLYIEAIMYSMSCQGIPEAFVTGK 249
            EAAE MA+RGESD A+A RAYRLL+AE  A   +    DG   T +S     +++++ A ALLSWIRC T GNGL+V + G+V TSDT +RRELW  HAPRVLQL+ E G++P+SD ELQQ++ EA+MYS++ QG+ EA V+GK
Sbjct:   13 EAAEAMASRGESDTAAAQRAYRLLDAELTAAAATAVSHDGPPPTTASVATLSTLSRSAAGALLSWIRCSTAGNGLIVADGGKVATSDTVERRELWGKHAPRVLQLVKESGEDPSSDPELQQIFTEAVMYSVATQGVVEAIVSGK 156          
BLAST of mRNA_P-canaliculata_contig9716.23799.1 vs. uniprot
Match: A0A836CID7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CID7_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.820e-32
Identity = 69/154 (44.81%), Postives = 96/154 (62.34%), Query Frame = 0
Query:  148 GDGDDETLSSSMTKATAAALLSWIRCKTEGNGLMVTEDGRVTTSDTADRRELWATHAPRVLQLLDEVGQEPASDAELQQLYIEAIMYSMSCQGIPEAFVTGKTLAFTSAMDVLVKDFPAQDNGVAHIFQGSYFLAAPWPIRSPRKACKSFEKAV 301
            GDG  E       ++ A   LSW+R KT+GNGL        +T D+   R +WA HAP++L+LL +     A D ++ Q Y EAIMY  S +GI     +G   AF +A+++LV  +P QDNGVA IFQG+Y+LAAPWP++S +KA  +FEKA+
Sbjct:   96 GDGSGEH----RQESEALQKLSWLRAKTDGNGLR----HDCSTVDSPPYRAIWAEHAPKILELLPQSA-AAAVDGDMAQAYTEAIMYKTSSKGIISGIASGNAFAFLNAVEMLVSQYPQQDNGVAFIFQGAYYLAAPWPVKSAKKAVAAFEKAL 240          
BLAST of mRNA_P-canaliculata_contig9716.23799.1 vs. uniprot
Match: A0A7S2HMX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HMX9_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.670e-11
Identity = 41/116 (35.34%), Postives = 67/116 (57.76%), Query Frame = 0
Query:  249 KTLAFTSAMDVLVKDFPAQDNGVAHIFQGSYFLAAPWPIRSPRKACKSFEKAVKVNGRSRRNVYYAGVGKLACGDRKGAAEMFRRAVSDEH-CESASATERDIAGALREQSKRGLA 363
            + +AF  A+  +++ FP  D+GVA +F+G+++ AAPWP+R+ + AC+ F+KA+     S RN Y  GV      D   A   F  A+  +  C S+  T+ D+A  +  ++K GLA
Sbjct:    1 EAIAFKRAVRDMMQ-FPEWDDGVAFVFEGAFYAAAPWPVRNNKYACECFDKALAQQPLSSRNQYLRGVAAYDSNDYGTAKLKFEAAMEYKAPCSSSELTQVDVAAFVLREAKCGLA 115          
BLAST of mRNA_P-canaliculata_contig9716.23799.1 vs. uniprot
Match: A0A1Q9DS85_SYMMI (Uncharacterized protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DS85_SYMMI)

HSP 1 Score: 67.8 bits (164), Expect = 3.920e-9
Identity = 48/201 (23.88%), Postives = 89/201 (44.28%), Query Frame = 0
Query:  164 AAALLSWIRCKTEGNGLMVTEDGRVTTSDTADRRELWATHAPRVLQLLDEVGQEPASDAELQQLYIEAIMYSMSCQGIPEAFVTGKTLAFTSAMDVLVKDFPAQDNGVAHIFQGSYFLAAPWPIRSPRKACKSFEKAVKVNGRSRRNVYYAGVGKLACGDRKGAAEMFRRAVSDEHCESASATERDIAGALREQSKRGLAL 364
            A AL   +R KT GN L+++      T D+    ++W    P      +        + +   +Y +A  Y  S  GI    +TG    F      +    P ++ G+  IF+G +++AAPWP+R  ++A     +A+    + +RN YY G+      + + A + F ++      +    +E D A  L ++++ G+ L
Sbjct:   80 ADALNCVMRIKTNGNMLLISG-----TQDSQSNIKVWKEVGPEAWDNANRALAALPKNPQAASVYADAFQYMSSAHGILRQALTGGGREFLRNAQRMQAVGPDEEGGLGFIFEGCFYIAAPWPLRDLKRALGLMRRAL-AQKKCKRNYYYVGLANYHLQNYEEAIDYFAKSAD---AKPEFLSEFDFAAGLTQEAQHGIKL 271          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9716.23799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L6Y2_9PHAE1.380e-10564.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSB7_ECTSI1.640e-4056.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CID7_9STRA2.820e-3244.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2HMX9_9STRA2.670e-1135.34Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A1Q9DS85_SYMMI3.920e-923.88Uncharacterized protein n=2 Tax=Symbiodinium micro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 24..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..371
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9716contigP-canaliculata_contig9716:2692..5148 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9716.23799.1mRNA_P-canaliculata_contig9716.23799.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9716 2328..5247 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9716.23799.1 ID=prot_P-canaliculata_contig9716.23799.1|Name=mRNA_P-canaliculata_contig9716.23799.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=372bp
MKMKRSRTTGSLGRPTSSCERPNIFALSLCFLGANSWQIVGPASRLIHTT
PGAGSNHSDSLSCASRTSSWNVGFACARRSLPWTTPRDGQLAVAADTSAA
VEEDKSKSVLVEAAEIMAARGESDAASADRAYRLLNAERDALRESGGGDG
DDETLSSSMTKATAAALLSWIRCKTEGNGLMVTEDGRVTTSDTADRRELW
ATHAPRVLQLLDEVGQEPASDAELQQLYIEAIMYSMSCQGIPEAFVTGKT
LAFTSAMDVLVKDFPAQDNGVAHIFQGSYFLAAPWPIRSPRKACKSFEKA
VKVNGRSRRNVYYAGVGKLACGDRKGAAEMFRRAVSDEHCESASATERDI
AGALREQSKRGLALCERNTAG*
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