prot_P-canaliculata_contig970.23777.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig970.23777.1
Unique Nameprot_P-canaliculata_contig970.23777.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length329
Homology
BLAST of mRNA_P-canaliculata_contig970.23777.1 vs. uniprot
Match: A0A2V3ILA4_9FLOR (DDE Tnp4 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILA4_9FLOR)

HSP 1 Score: 228 bits (581), Expect = 3.180e-69
Identity = 132/289 (45.67%), Postives = 169/289 (58.48%), Query Frame = 0
Query:    4 DNDHSVNLLLGAVDSLKNAMTDQDSQFLSRTNFRWEEWQEFAPPVCDEIIRRAR-SGHVKTKRGRPPKLTPEQRLMSTVLLLKKGNTAREESGAFNWSRTSVNADSTFVMECICAVWQAQEIRWPTAAERVVAGRREPDLEGCVGCIEGTLCRIERPSTIGQRHIHYFNGRKKMYCMNSTVVIDHDGLFIDIDAGYAGSFHDVTILRHSPLYRTWQQRFTRDPRNNY-IEYLLGHPGYASAGMFIMRQFDRRELVN-QPGPVMDAYNKKHAGKRIQVEWGICGVKMQWR 289
            D D SVN  +  +  L N +    S F +       E++     VC  II+ AR + +V+   G P KL P +RL+S ++ L+  N  REE+  +N+SRTS+  D+ FV   I     A EI WPT AER     R     GCVG ++G LCRI RP    + H  YFNGRKKMYC NS VVIDHDG+FI I  G AGS+HDVT+LR + L R WQ+ F  D  + + +EYLLG PGY     FI+R  D REL N    PV+ A+NK HAG R+ VEWGI G+K  +R
Sbjct:   47 DGDFSVNPPIPKISRLNNLIQGHLSLFKTNAGLYPAEFEALYAVVCPIIIQWARHTNNVRGLAGIPSKLMPSERLLSCIMYLRGRNGVREEASYWNYSRTSLRDDAMFVCGIINES-MASEISWPTTAERQQQRSRISLFPGCVGYVDGILCRIRRPHD--RHHRAYFNGRKKMYCFNSAVVIDHDGMFIYIAPGNAGSYHDVTVLRDTGLSRNWQEHFAVDHDSPHPVEYLLGDPGYLGLDHFILRCIDARELANVDQDPVLRAFNKLHAGYRVTVEWGIGGLKQLFR 332          
BLAST of mRNA_P-canaliculata_contig970.23777.1 vs. uniprot
Match: A0A2V3IE22_9FLOR (DDE Tnp4 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE22_9FLOR)

HSP 1 Score: 229 bits (584), Expect = 5.020e-69
Identity = 127/332 (38.25%), Postives = 186/332 (56.02%), Query Frame = 0
Query:    1 DHRDNDHSVNLLLGAVDSLKNAMTDQDSQFLSRTNFRWEEWQEFAPPVCDEIIRRAR-SGHVKTKRGRPPKLTPEQRLMSTVLLLKKGNTAREESGAFNWSRTSVNADSTFVMECICAVWQAQEIRWPTAAERVVAGRREPDLEGCVGCIEGTLCRIERPSTIGQRHIHYFNGRKKMYCMNSTVVIDHDGLFIDIDAGYAGSFHDVTILRHSPLYRTWQQRFTRDPRN-NYIEYLLGHPGYASAGMFIMRQFDRRELVNQPG-PVMDAYNKKHAGKRIQVEWGICGVKMQWRVLRNTFRRDRKMFGLTFATCCTMTNFLHRRRKNMRVEVAG 329
            D  D D+ VN L   +D L+   +   S F + T     E++  +   C  +  R+R SG +    GRP KL P++RL+S +L L+   + R  S ++N+SR+S++ D+ F+ E I  V  A+E +W     R     R   + GCVG ++GTLCRI +P+     H  YF   KKMYC N+ VV+DHDGLFI + AGY GSFHD  +L+ +PL   WQQ FT D  + + +E++LG PGY     F+  + D  E  +     V+ A+NK HAG  + VEWGI G+K +++    T    R  F L F+T   +TNF+HRR+K+    + G
Sbjct:   50 DKVDRDYFVNALFPKLDLLQQLTSGHISTFKTVTGLYPGEFECLSERSCPILFCRSRYSGQILMTTGRPTKLNPQERLLSVILYLRHNYSVRYGSSSWNYSRSSLHEDALFICEIITVV-MAREAKWLNIVRRAQLRTRISQVPGCVGFVDGTLCRIRQPNC--SDHRAYFRRCKKMYCFNTCVVVDHDGLFIYVSAGYVGSFHDARVLKETPLGSNWQQYFTFDLNSPSPLEFVLGDPGYMEMDQFVPSRLDAIEFSDVDAHSVLQAFNKMHAGFCVAVEWGIGGLKCKFKKFLETCLNRRDTFELIFSTAAILTNFMHRRKKDYATSMEG 378          
BLAST of mRNA_P-canaliculata_contig970.23777.1 vs. uniprot
Match: A0A2X0MTD9_9BASI (BZ3500_MvSof-1268-A1-R1_Chr11-2g03413 protein n=1 Tax=Microbotryum saponariae TaxID=289078 RepID=A0A2X0MTD9_9BASI)

HSP 1 Score: 96.3 bits (238), Expect = 1.210e-18
Identity = 63/177 (35.59%), Postives = 93/177 (52.54%), Query Frame = 0
Query:  122 QEIRWPTAAERVVAGRREPDLE--GCVGCIEGTLCRIERPSTIGQRHIHYFNGRKKMYCMNSTVVIDHDGLFIDIDAGYAGSFHDVTILRHSPLYRTWQQRFTRDPRNNYIEYLLGHPGYASAGMFIMRQFDRRELVNQPGPV----MDAYNKKHAGKRIQVEWGICGVKMQWRVLR 292
            Q IRWPT AE   A R    LE   C+G I+GTL  +   +   +  + ++NGRKKMYC+N    +D    F  +D G+ G  HD  + R S ++R       RD      ++LLG  GYA + + I R F++ E+ N   P+     +++NKK A KRI VE     +K ++R L+
Sbjct:  155 QVIRWPTGAE---AARVSEALEVDKCIGVIDGTLLPLAT-APFAKDRMTFYNGRKKMYCLNMQATVDDKRRFTSVDGGFPGIRHDNEMFRQSQIWRR------RDVYFRGRKFLLGDKGYAQSAVLI-RSFNQTEM-NAMSPLEQRRANSFNKKFASKRIVVEHAFGDIKDKFRWLK 319          
BLAST of mRNA_P-canaliculata_contig970.23777.1 vs. uniprot
Match: A0A0H5QFP5_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QFP5_9EUKA)

HSP 1 Score: 76.3 bits (186), Expect = 3.420e-13
Identity = 54/141 (38.30%), Postives = 70/141 (49.65%), Query Frame = 0
Query:    4 DNDHSVNLLLGAVDSLKNAMTDQDSQFLSRTNFRWEEWQEFAPPVCDEIIRRAR-SGHVKTK-RGRPPKLTPEQRLMSTVLLLKKGNTAREESGAFNWSRTSVNADSTFVMECICAVWQAQEIRWPTAAERVVAGRREPDL 142
            D D+SVN L    D L        S F S   F   E++     +C   I  AR S  +K K RG PPKL P +RL+S +  +K  N AR E+  +N+SRTS+NADS F+   I     + EI WP A +    GR  P  
Sbjct:    8 DGDYSVNELSDKTDRLFYMQMGHSSIFKSMIGFTLSEYERLCEKLCPVPILYARHSRKMKVKQRGWPPKLCPAERLISFIHYIKHNNGARHEATEWNYSRTSLNADSVFIASAINMAL-SDEIEWPNAEKGSRLGRVLPSF 147          
BLAST of mRNA_P-canaliculata_contig970.23777.1 vs. uniprot
Match: A0A368GZH8_ANCCA (Putative nuclease HARBI1 n=1 Tax=Ancylostoma caninum TaxID=29170 RepID=A0A368GZH8_ANCCA)

HSP 1 Score: 73.2 bits (178), Expect = 6.900e-11
Identity = 56/194 (28.87%), Postives = 82/194 (42.27%), Query Frame = 0
Query:  124 IRWPTAAERVVAGR---REPDLEGCVGCIEGTLCRIERPSTIGQRHIHYFNGRKKMYCMNSTVVIDHDGLFIDIDAGYAGSFHDVTILRHSPLYRTWQQRFTRDPRNNYIEYLLGHPGYASAGMFIMRQFDRRELVNQPGPVMDAYNKKHAGKRIQVEWGICGVKMQWRVLRNTFRRDRKMFGLTFATCCTMTN 314
            IRWP + E     R   R   L G VG I+GT C+I RPS   + +I     RK    +N+ VVID       + A + GS HD  + + S LYR  +       RN     ++G   YA   MF+++  +  +   +       YNK     R ++E     +K QW +L    R   +        CC + N
Sbjct:  121 IRWPDSEECAEIRRSFFRAHGLPGIVGIIDGTHCKIMRPSDDPEDYIC----RKTYPSLNAGVVIDFTTRIRWVCAKWPGSAHDSRVFKTSELYRQLE-------RNEVQGAIIGDSAYALE-MFLLKPLNNPQTRKEV-----KYNKALCSARAKIEQSFGVLKRQWHILHGECRYAPEKAAQIIVACCVLRN 297          
BLAST of mRNA_P-canaliculata_contig970.23777.1 vs. uniprot
Match: A0A183GFQ1_HELPZ (Putative nuclease HARBI1 n=1 Tax=Heligmosomoides polygyrus TaxID=6339 RepID=A0A183GFQ1_HELPZ)

HSP 1 Score: 72.8 bits (177), Expect = 9.260e-11
Identity = 59/199 (29.65%), Postives = 87/199 (43.72%), Query Frame = 0
Query:  121 AQEIRWPTAAERVVAGR---REPDLEGCVGCIEGTLCRIERPSTIGQRHIHYFNGRKKMYCMNSTVVIDHDGLFIDIDAGYAGSFHDVTILRHSPLYRTWQQRFTRDPRNNYIEYLLGHPGYASAGMFIMRQFDRRELVNQPGPVMDAYNKKHAGKRIQVEWGICGVKMQWRVLRN--TFRRDRKMFGLTFATCCTMTN 314
            AQ IRWP   E     R   R   L G VG I+GT CRI+RP T+ +     F  RK  + +N  +V+D+      + A + GS HD  + R S LYR  + R            LLG   YA A  F+++  +      +     + YN+     R ++E     +K Q+ +L    +FR   +       TCC + N
Sbjct:  118 AQFIRWPEPGECAELRRLFFRTYGLPGVVGIIDGTHCRIQRP-TVNEED---FVCRKGYHSLNVGMVVDYHKKIRWVCANWPGSAHDSRVFRTSALYRQLRSRELEG-------VLLGDSAYA-AETFLLKPLNTPRTDQE-----ERYNRAVNSARARIEQSFGVLKRQFHILHGECSFRYSPEKAAEIIVTCCVLRN 299          
BLAST of mRNA_P-canaliculata_contig970.23777.1 vs. uniprot
Match: A0A674NQH2_TAKRU (DDE Tnp4 domain-containing protein n=1 Tax=Takifugu rubripes TaxID=31033 RepID=A0A674NQH2_TAKRU)

HSP 1 Score: 70.5 bits (171), Expect = 3.720e-10
Identity = 51/139 (36.69%), Postives = 65/139 (46.76%), Query Frame = 0
Query:  140 PDLEGCVGCIEGTLCRIERPSTIGQRHIHYFNGRKKMYCMNSTVVIDHDGLFIDIDAGYAGSFHDVTILRHSPLYRTWQQRFTRDPRNNYIEYLLGHPGYASAGMFIMRQFDRRELVNQPGPVMDAYNKKHAGKRIQVE 278
            P L+  VG I+G   RI+ P    Q    YFN RK  Y +    V DH G+FIDI AGY GS HD  +LR+SPLY          P   Y   ++G  GY      I      RE V     ++  +N+ HA  R  +E
Sbjct:  166 PALQNVVGGIDGCHIRIKSPGAHAQC---YFN-RKLFYSIQLQAVCDHQGVFIDIFAGYPGSVHDARVLRNSPLYVQGLY-----PPEGYC--IVGDGGYPCMSRPIALVTPYREPV--ANKMVARFNRHHAKARSVIE 291          
BLAST of mRNA_P-canaliculata_contig970.23777.1 vs. uniprot
Match: W2PBL3_PHYPN (DDE Tnp4 domain-containing protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PBL3_PHYPN)

HSP 1 Score: 67.8 bits (164), Expect = 5.800e-9
Identity = 41/160 (25.62%), Postives = 74/160 (46.25%), Query Frame = 0
Query:  142 LEGCVGCIEGTLCRIERPSTIGQRHI---HYFNGRKKMYCMNSTVVIDHDGLFIDIDAGYAGSFHDVTILRHSPLYRTWQQRFTRDPRNNYIEYLLGHPGYASAGMFIMRQFDRRELVNQPGPVMDAYNKKHAGKRIQVEWGICGVKMQWRVLRNTFRRD 298
            + GC+GC++G LCRI+ P+      +    Y++G      +N   V D    FI +DA + GS +D    R + + R      T         Y++G   Y S G  ++  F R +++++     D++N   +  RI++E     +  +WR+ R    R+
Sbjct:  172 MSGCIGCVDGWLCRIKTPTLADAGEVGVGRYYSGHYACPGINVQAVCDAHCRFIAVDASFPGSTNDARAFRDTGVSRALNNLPTG-------MYIIGDNAY-SVGEHLLTPFSRNQIMDE---YHDSFNFHASQLRIRIEMAFGLLTTKWRIFRFPIERN 320          
BLAST of mRNA_P-canaliculata_contig970.23777.1 vs. uniprot
Match: UPI001E1CA3F4 (uncharacterized protein LOC120967927 isoform X1 n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI001E1CA3F4)

HSP 1 Score: 67.0 bits (162), Expect = 9.700e-9
Identity = 52/186 (27.96%), Postives = 79/186 (42.47%), Query Frame = 0
Query:  137 RREPDLEGCVGCIEGTLCRIERPSTIGQRHIHYFNGRKKMYCMNSTVVIDHDGLFIDIDAGYAGSFHDVTILRHSPLYRTWQQRFTRDPRNNYIEYLLGHPGYASAGMFI----MRQFDRRELV--NQPGPVMDAYNKKHAGKRIQVEWGICGVKMQWRVLRNTFRRDRKMFGLTFATCCTMTNFL 316
            R +P  + C+G I+GT      P  +  R +  F GRK     N    +D D LF  + AG+ GS HD T+LRHS  +        R P   Y    L   GYA+   F+      ++  RE    N+P    + +N +H+  R  VE     +K +++VL                 CC + N++
Sbjct:  159 RFDPYFKDCIGAIDGTHV----PCNVPPRIVDRFRGRKPFPTQNVLAAVDFDLLFTYVCAGWEGSAHDSTVLRHSLEHPNG----LRVPEGKYY---LADAGYAARKGFLPPFRQTRYHLREWRGNNRPRTQNELFNLRHSSLRTTVERAFGTLKNRFKVLTTRPYYPFPSQVRVVIACCILHNWI 333          
BLAST of mRNA_P-canaliculata_contig970.23777.1 vs. uniprot
Match: A0A6J8EH76_MYTCO (DDE Tnp4 domain-containing protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8EH76_MYTCO)

HSP 1 Score: 63.5 bits (153), Expect = 2.480e-8
Identity = 42/147 (28.57%), Postives = 68/147 (46.26%), Query Frame = 0
Query:  142 LEGCVGCIEGTLCRIERPSTIGQRHIHYFNGRKKMYCMNSTVVIDHDGLFIDIDAGYAGSFHDVTILRHSPLYRTW---QQRFTRDPRNNYIEYLLGHPGYASAGMFIMRQFDRRELVNQPGPVMDAYNKKHAGKRIQVEWGICGVK 285
            L+GC+GCI+ T   I+ P      +++     K  + +    + +H   F D+  G AGS HD T+LR SPLY      +Q++  D       YL+G   Y      I +  D  +L ++       +NK+ + KR  +E   C +K
Sbjct:   55 LQGCIGCIDSTHIPIKGPREQENAYVNC----KGYHSIVLQGICNHQRKFTDVFCGCAGSTHDATVLRSSPLYTEVCRNKQKYLPDET-----YLIGDKAYPLESWLIKKYQDTGKLFDKQA----RFNKRLSNKRQLIEQTFCILK 188          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig970.23777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A2V3ILA4_9FLOR3.180e-6945.67DDE Tnp4 domain-containing protein n=1 Tax=Gracila... [more]
A0A2V3IE22_9FLOR5.020e-6938.25DDE Tnp4 domain-containing protein n=1 Tax=Gracila... [more]
A0A2X0MTD9_9BASI1.210e-1835.59BZ3500_MvSof-1268-A1-R1_Chr11-2g03413 protein n=1 ... [more]
A0A0H5QFP5_9EUKA3.420e-1338.30Uncharacterized protein (Fragment) n=1 Tax=Spongos... [more]
A0A368GZH8_ANCCA6.900e-1128.87Putative nuclease HARBI1 n=1 Tax=Ancylostoma canin... [more]
A0A183GFQ1_HELPZ9.260e-1129.65Putative nuclease HARBI1 n=1 Tax=Heligmosomoides p... [more]
A0A674NQH2_TAKRU3.720e-1036.69DDE Tnp4 domain-containing protein n=1 Tax=Takifug... [more]
W2PBL3_PHYPN5.800e-925.63DDE Tnp4 domain-containing protein n=1 Tax=Phytoph... [more]
UPI001E1CA3F49.700e-927.96uncharacterized protein LOC120967927 isoform X1 n=... [more]
A0A6J8EH76_MYTCO2.480e-828.57DDE Tnp4 domain-containing protein n=1 Tax=Mytilus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 149..314
e-value: 1.0E-25
score: 90.2
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 45..324
NoneNo IPR availablePANTHERPTHR22930:SF116ZMP:0000000634coord: 45..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig970contigP-canaliculata_contig970:23205..24264 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig970.23777.1mRNA_P-canaliculata_contig970.23777.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig970 23205..24264 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig970.23777.1 ID=prot_P-canaliculata_contig970.23777.1|Name=mRNA_P-canaliculata_contig970.23777.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=329bp
DHRDNDHSVNLLLGAVDSLKNAMTDQDSQFLSRTNFRWEEWQEFAPPVCD
EIIRRARSGHVKTKRGRPPKLTPEQRLMSTVLLLKKGNTAREESGAFNWS
RTSVNADSTFVMECICAVWQAQEIRWPTAAERVVAGRREPDLEGCVGCIE
GTLCRIERPSTIGQRHIHYFNGRKKMYCMNSTVVIDHDGLFIDIDAGYAG
SFHDVTILRHSPLYRTWQQRFTRDPRNNYIEYLLGHPGYASAGMFIMRQF
DRRELVNQPGPVMDAYNKKHAGKRIQVEWGICGVKMQWRVLRNTFRRDRK
MFGLTFATCCTMTNFLHRRRKNMRVEVAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027806HARBI1_dom