prot_P-canaliculata_contig96961.23747.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig96961.23747.1
Unique Name	prot_P-canaliculata_contig96961.23747.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	266

Homology

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BLAST of mRNA_P-canaliculata_contig96961.23747.1 vs. uniprot
Match: Q2TUG8_9PHAE (Ribosomal protein S4 n=2 Tax=Desmarestia TaxID=31339 RepID=Q2TUG8_9PHAE)

HSP 1 Score: 523 bits (1348), Expect = 1.240e-187
Identity = 248/269 (92.19%), Postives = 257/269 (95.54%), Query Frame = 0

Query:    1 MRFKHRYKSCLWSRTDIWGDLLCKESTLLRPKWDTIMGFLSNQKRRRRPLSQIRLQNRRPTHPLSHDYRFIKPRARANQIFKYSRWGYRNTLSILFCLRRFYGDLNHRAFKRLCHSVS----PSQKLLGILEGRLDISLYRLGFFHSIFYSRQAILHNKVLVNGEKIGHGGFILQKGDYVEFCPTHRPAIRARLLARFKRYRSFRVRMERWRLSHRYKFELHLQPTPRWIQTDYPNLSFILSANVGVPLLFPFRVDVDEAVWAAKYGFL 265
            MRFKHRYKSCLWSRTDIWGDLLCKE+T LRPKWDTIMGFL NQKRRRRPL+QIRLQNRRPTHPL HDYRFIKPRARANQ FKY+RWGYRNTLSILFCLRRFYGDLNH+AFKRLCHSVS    PSQKLLGILEGRLDISLYRLGFFHSIFYSRQAILHNKVLVNGEKIGHGGFILQKGDYVEFCPT RPAIRARLLAR+KRYRSFRVRMERWRLSHRYKFELHLQPTPRWIQTDY NLSFILSANVG P++FPFR DVDE++WAAKYGFL
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLCKEATFLRPKWDTIMGFLGNQKRRRRPLTQIRLQNRRPTHPLCHDYRFIKPRARANQTFKYNRWGYRNTLSILFCLRRFYGDLNHKAFKRLCHSVSSSTTPSQKLLGILEGRLDISLYRLGFFHSIFYSRQAILHNKVLVNGEKIGHGGFILQKGDYVEFCPTQRPAIRARLLARYKRYRSFRVRMERWRLSHRYKFELHLQPTPRWIQTDYSNLSFILSANVGAPIIFPFRADVDESIWAAKYGFL 269

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BLAST of mRNA_P-canaliculata_contig96961.23747.1 vs. uniprot
Match: A0A8F0FCX2_9PHAE (Ribosomal protein S4 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0FCX2_9PHAE)

HSP 1 Score: 432 bits (1110), Expect = 2.000e-151
Identity = 207/269 (76.95%), Postives = 233/269 (86.62%), Query Frame = 0

Query:    1 MRFKHRYKSCLWSRTDIWGDLLCKESTLLRPKWDTIMGFLSNQKRRRRPLSQIRLQNRRPTHPLSHDYRFIKPRARANQIFKYSRWGYRNTLSILFCLRRFYGDLNHRAFKRLCHSV----SPSQKLLGILEGRLDISLYRLGFFHSIFYSRQAILHNKVLVNGEKIGHGGFILQKGDYVEFCPTHRPAIRARLLARFKRYRSFRVRMERWRLSHRYKFELHLQPTPRWIQTDYPNLSFILSANVGVPLLFPFRVDVDEAVWAAKYGFL 265
            MRFKHRYKSCLWSRTDIWGDLL KE T LRPKWDTIMG L +QKRR RPL  I     R  +PL HDY+F+KPRARANQIFKY+R GYRNTLS+LFCLRRFYGDL+H++FK+ C S+     PSQKLLG LEGRLDI+LYRLGFFHSIFYSRQAILH+KVLVNGEKIG+GGFILQKGDYVEFCP  RPAIRARLLAR+K +RS  VR+ERWRLS R+K+ELHLQPTP+WI TDY NLSFILS+ V VP++FPFR DVDEA+WA+KYG+L
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLGKEKTFLRPKWDTIMGILGSQKRRHRPLVNIN----RYRYPLCHDYKFLKPRARANQIFKYNRRGYRNTLSLLFCLRRFYGDLSHKSFKKFCRSMFALKDPSQKLLGALEGRLDITLYRLGFFHSIFYSRQAILHHKVLVNGEKIGYGGFILQKGDYVEFCPLQRPAIRARLLARYKHFRSAEVRLERWRLSPRFKYELHLQPTPKWIHTDYSNLSFILSSEVCVPIMFPFRADVDEALWASKYGYL 265

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BLAST of mRNA_P-canaliculata_contig96961.23747.1 vs. uniprot
Match: W5RG02_COSCS (Ribosomal protein S4 n=9 Tax=Laminariales TaxID=2886 RepID=W5RG02_COSCS)

HSP 1 Score: 418 bits (1074), Expect = 6.080e-146
Identity = 195/269 (72.49%), Postives = 232/269 (86.25%), Query Frame = 0

Query:    1 MRFKHRYKSCLWSRTDIWGDLLCKESTLLRPKWDTIMGFLSNQKRRRRPLSQIRLQNRRPTHPLSHDYRFIKPRARANQIFKYSRWGYRNTLSILFCLRRFYGDLNHRAFKRLCHSV----SPSQKLLGILEGRLDISLYRLGFFHSIFYSRQAILHNKVLVNGEKIGHGGFILQKGDYVEFCPTHRPAIRARLLARFKRYRSFRVRMERWRLSHRYKFELHLQPTPRWIQTDYPNLSFILSANVGVPLLFPFRVDVDEAVWAAKYGFL 265
            MRFKHRYKSCLWSRTDIWGDLL KE T LRPKWD+I+G L +QKRR RPL+ I     R  HPL HDY F+KPR R NQIFKY+R  YRNTLS+L C+RRFYGDL+H+AFKR C  +    +P+QKL+G LEGRLDISLYRLGFFHSI+YSRQAILHNKVLVNGEKIG+GGFILQKGD+VEFCP+ R AIRARL+AR+KR+RSF V++ERWRLS+R+KFEL+L PTP+W+QTDY NLSFILS+++  P+++PFRVDVDEA+WA++YG L
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLSKEKTFLRPKWDSIIGVLGSQKRRHRPLANIN----RYRHPLCHDYNFVKPRVRPNQIFKYNRLSYRNTLSLLLCIRRFYGDLSHKAFKRFCQPLVSLKTPAQKLIGSLEGRLDISLYRLGFFHSIYYSRQAILHNKVLVNGEKIGYGGFILQKGDFVEFCPSQRSAIRARLVARYKRFRSFHVKLERWRLSNRFKFELYLYPTPKWVQTDYSNLSFILSSDICAPVMYPFRVDVDEALWASRYGHL 265

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BLAST of mRNA_P-canaliculata_contig96961.23747.1 vs. uniprot
Match: S4S3Q3_LAMHY (Ribosomal protein S4 n=35 Tax=Laminariales TaxID=2886 RepID=S4S3Q3_LAMHY)

HSP 1 Score: 411 bits (1057), Expect = 2.360e-143
Identity = 193/269 (71.75%), Postives = 228/269 (84.76%), Query Frame = 0

Query:    1 MRFKHRYKSCLWSRTDIWGDLLCKESTLLRPKWDTIMGFLSNQKRRRRPLSQIRLQNRRPTHPLSHDYRFIKPRARANQIFKYSRWGYRNTLSILFCLRRFYGDLNHRAFKRLCHSV----SPSQKLLGILEGRLDISLYRLGFFHSIFYSRQAILHNKVLVNGEKIGHGGFILQKGDYVEFCPTHRPAIRARLLARFKRYRSFRVRMERWRLSHRYKFELHLQPTPRWIQTDYPNLSFILSANVGVPLLFPFRVDVDEAVWAAKYGFL 265
            MRFKHRYKSCLWSRTDIWGDLL KE T LRPKWD+I+G L +QKRR RPL+ I     R  HPL HDY F+KPR R NQ FKY+R  YRNTLSIL  +RRFYGDL+H+AFKR C  +    +P QKL+G LEGRLDISLYRLGFFHSI+YSRQ+I HNKVLVNG+KIGHGGFILQKGDYVEFCP+ R AIRARL+AR+KR+RS  V++ERWRLS+R+KFELHLQPTP+W+QTDY NLSFILS++V  P+++PFRVDVDEA+W+++Y +L
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLSKEKTFLRPKWDSIIGVLGSQKRRHRPLANIN----RYRHPLCHDYNFLKPRVRPNQTFKYNRISYRNTLSILLSIRRFYGDLSHKAFKRFCQPLVSLKNPPQKLIGALEGRLDISLYRLGFFHSIYYSRQSIFHNKVLVNGKKIGHGGFILQKGDYVEFCPSQRSAIRARLVARYKRFRSSHVKLERWRLSNRFKFELHLQPTPKWVQTDYSNLSFILSSDVCAPVMYPFRVDVDEALWSSRYSYL 265

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BLAST of mRNA_P-canaliculata_contig96961.23747.1 vs. uniprot
Match: A0A516ICH2_9PHAE (Ribosomal protein S4 n=3 Tax=Lessonia TaxID=105411 RepID=A0A516ICH2_9PHAE)

HSP 1 Score: 411 bits (1057), Expect = 2.360e-143
Identity = 192/269 (71.38%), Postives = 229/269 (85.13%), Query Frame = 0

Query:    1 MRFKHRYKSCLWSRTDIWGDLLCKESTLLRPKWDTIMGFLSNQKRRRRPLSQIRLQNRRPTHPLSHDYRFIKPRARANQIFKYSRWGYRNTLSILFCLRRFYGDLNHRAFKRLCHSV----SPSQKLLGILEGRLDISLYRLGFFHSIFYSRQAILHNKVLVNGEKIGHGGFILQKGDYVEFCPTHRPAIRARLLARFKRYRSFRVRMERWRLSHRYKFELHLQPTPRWIQTDYPNLSFILSANVGVPLLFPFRVDVDEAVWAAKYGFL 265
            MRFKHRYKSCLWS+TDIWGDLL KE T LRPKWD I+G L +QKRR RPL+ I     R  HPL HDY F+KPR R NQIFKY++ GY+NTL+IL C+RRFYGDL+H+ FKR C  +     PSQKL+  LE RLDISLYRLGFFHSI+YSRQAILHNKVLVNG+KIG+GGFILQKGD++EFCP+ R AI+ RL+AR+KR+RSF V++ERWRLS+R+KFELHLQPTP WIQTDY NLSF+LS++V VP+L+PFRVD+DEA+WA+KYG+L
Sbjct:    1 MRFKHRYKSCLWSKTDIWGDLLSKEKTFLRPKWDNIIGVLESQKRRHRPLANIN----RYRHPLCHDYNFLKPRVRPNQIFKYNKVGYKNTLAILLCVRRFYGDLSHKGFKRFCQPLVAFTDPSQKLIKSLERRLDISLYRLGFFHSIYYSRQAILHNKVLVNGKKIGYGGFILQKGDFIEFCPSQRSAIKTRLMARYKRFRSFHVKLERWRLSNRFKFELHLQPTPTWIQTDYSNLSFMLSSDVCVPVLYPFRVDIDEALWASKYGYL 265

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BLAST of mRNA_P-canaliculata_contig96961.23747.1 vs. uniprot
Match: A0A8F0K0K8_9PHAE (Ribosomal protein S4 n=3 Tax=Laminariales TaxID=2886 RepID=A0A8F0K0K8_9PHAE)

HSP 1 Score: 411 bits (1056), Expect = 3.350e-143
Identity = 190/269 (70.63%), Postives = 231/269 (85.87%), Query Frame = 0

Query:    1 MRFKHRYKSCLWSRTDIWGDLLCKESTLLRPKWDTIMGFLSNQKRRRRPLSQIRLQNRRPTHPLSHDYRFIKPRARANQIFKYSRWGYRNTLSILFCLRRFYGDLNHRAFKRLCHSV----SPSQKLLGILEGRLDISLYRLGFFHSIFYSRQAILHNKVLVNGEKIGHGGFILQKGDYVEFCPTHRPAIRARLLARFKRYRSFRVRMERWRLSHRYKFELHLQPTPRWIQTDYPNLSFILSANVGVPLLFPFRVDVDEAVWAAKYGFL 265
            MRFKHRYKSCLWSRTDIWGDLL K+ T LRPKWD+I+G LS+QKRR RPL+ I     R  +PL HDY F+KPR R NQIFKY+R  YRNTLS+L C+RRFYGDLNH+AFK  C S+    +P QKL+G LEGRLD+SLYRLGFFHSI+YSRQAILH+KVLVNG++IGHGGFILQKGD+VEFCP+ R +IRARL+ R+KR+RS  V++ERWRLS+R+KF+LHL PTP+W+QTDY NLSFI+S++V VP+++PFRVDVDEA+W +KYG+L
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLSKDKTFLRPKWDSIIGVLSSQKRRHRPLANIN----RYRYPLCHDYNFLKPRVRPNQIFKYNRISYRNTLSLLLCIRRFYGDLNHKAFKNFCKSLVSLKNPPQKLIGALEGRLDVSLYRLGFFHSIYYSRQAILHSKVLVNGKRIGHGGFILQKGDFVEFCPSQRSSIRARLVGRYKRFRSSYVKLERWRLSNRFKFDLHLHPTPKWVQTDYSNLSFIMSSDVCVPVIYPFRVDVDEALWCSKYGYL 265

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BLAST of mRNA_P-canaliculata_contig96961.23747.1 vs. uniprot
Match: A0A8F0JZU7_9PHAE (Ribosomal protein S4 n=1 Tax=Dictyoneurum californicum TaxID=169784 RepID=A0A8F0JZU7_9PHAE)

HSP 1 Score: 410 bits (1055), Expect = 4.750e-143
Identity = 193/269 (71.75%), Postives = 229/269 (85.13%), Query Frame = 0

Query:    1 MRFKHRYKSCLWSRTDIWGDLLCKESTLLRPKWDTIMGFLSNQKRRRRPLSQIRLQNRRPTHPLSHDYRFIKPRARANQIFKYSRWGYRNTLSILFCLRRFYGDLNHRAFKRLCHSV----SPSQKLLGILEGRLDISLYRLGFFHSIFYSRQAILHNKVLVNGEKIGHGGFILQKGDYVEFCPTHRPAIRARLLARFKRYRSFRVRMERWRLSHRYKFELHLQPTPRWIQTDYPNLSFILSANVGVPLLFPFRVDVDEAVWAAKYGFL 265
            MRFKH+YKSCLW RTDIWGDLL KE T LRPKWD+I+G L +QKRR RPL+ I     R  HPL HDY F+KPR R NQIFKY+R  YRNTLS+L C+RRFYGDL+H+AFK+ C  +    +P++ L+G LEGRLDISLYRLGFFHSI+YSRQAILHNKVLVNG+KI  GGFILQKGDYVEFC + R AIRARL+AR+KR+RSF V++ERWRLS+R+KFELHLQPTP+WIQTDY NLSFILS+NV  P+++PFRVD+DEA+WA+KYG+L
Sbjct:    1 MRFKHKYKSCLWLRTDIWGDLLSKEKTFLRPKWDSIIGVLGSQKRRHRPLANIN----RYRHPLCHDYNFVKPRVRPNQIFKYNRISYRNTLSLLLCIRRFYGDLSHKAFKKFCRPLVSLKNPTKNLIGSLEGRLDISLYRLGFFHSIYYSRQAILHNKVLVNGKKIADGGFILQKGDYVEFCFSQRSAIRARLVARYKRFRSFYVKLERWRLSNRFKFELHLQPTPKWIQTDYSNLSFILSSNVCAPVIYPFRVDIDEALWASKYGYL 265

[Close]

BLAST of mRNA_P-canaliculata_contig96961.23747.1 vs. uniprot
Match: A0A089MX47_PETFA (Ribosomal protein S4 n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A089MX47_PETFA)

HSP 1 Score: 408 bits (1049), Expect = 3.890e-142
Identity = 188/269 (69.89%), Postives = 228/269 (84.76%), Query Frame = 0

Query:    1 MRFKHRYKSCLWSRTDIWGDLLCKESTLLRPKWDTIMGFLSNQKRRRRPLSQIRLQNRRPTHPLSHDYRFIKPRARANQIFKYSRWGYRNTLSILFCLRRFYGDLNHRAFKRLCH----SVSPSQKLLGILEGRLDISLYRLGFFHSIFYSRQAILHNKVLVNGEKIGHGGFILQKGDYVEFCPTHRPAIRARLLARFKRYRSFRVRMERWRLSHRYKFELHLQPTPRWIQTDYPNLSFILSANVGVPLLFPFRVDVDEAVWAAKYGFL 265
            MRFK++YKSCLWSRT+IWGDLL KE T LRPKWD+++  L +QKRR RPL  I     R  HP+ HDYR++KPR+RANQ+FKY+R GYRNTLS+L CLRRFYGDL+H++FK  CH    S  PSQ LL  LEGRLDI LYRLGFFHSI+YSRQAILHNKVL+NG+KIGH GFILQKGD+VEFC + RPAI+ARL+ARFKR+RS  +R+ERWRLSHRYK +LHLQPTP+WIQTDY NLSFI+S+ VGVP+++PFR ++DEA+WA+KY ++
Sbjct:    1 MRFKNKYKSCLWSRTNIWGDLLAKEETFLRPKWDSMIAILRSQKRRHRPLVNIN----RYRHPICHDYRYLKPRSRANQVFKYNRVGYRNTLSLLLCLRRFYGDLSHKSFKNFCHPAFKSKDPSQNLLSALEGRLDICLYRLGFFHSIYYSRQAILHNKVLINGKKIGHCGFILQKGDFVEFCSSQRPAIKARLVARFKRFRSSYIRLERWRLSHRYKLQLHLQPTPKWIQTDYSNLSFIISSEVGVPVMYPFRANIDEALWASKYAYI 265

[Close]

BLAST of mRNA_P-canaliculata_contig96961.23747.1 vs. uniprot
Match: A0A0U1V7R9_9PHAE (Ribosomal protein S4 n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1V7R9_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 3.190e-141
Identity = 189/269 (70.26%), Postives = 226/269 (84.01%), Query Frame = 0

Query:    1 MRFKHRYKSCLWSRTDIWGDLLCKESTLLRPKWDTIMGFLSNQKRRRRPLSQIRLQNRRPTHPLSHDYRFIKPRARANQIFKYSRWGYRNTLSILFCLRRFYGDLNHRAFKRLCH----SVSPSQKLLGILEGRLDISLYRLGFFHSIFYSRQAILHNKVLVNGEKIGHGGFILQKGDYVEFCPTHRPAIRARLLARFKRYRSFRVRMERWRLSHRYKFELHLQPTPRWIQTDYPNLSFILSANVGVPLLFPFRVDVDEAVWAAKYGFL 265
            MRFK++YKSCLWSRT+IWGDLL KE T LRPKWD+++  L +QKRR RPL  I     R  HP+ HDY+++KPR+RANQ+FKY+R GYRNTLSILFCLRRFYGDLNH+ FK  C     S  PSQ LL  LEGRLDI LYRLGFFHSI+YSRQAILHNKVL+NG+KIGH GF+LQKGDYVEFCP+ R AI+ARL+ARFKR+RS  +R+ERWRLSHRYK +LHLQPTP WIQTDYP+LSFI+ + VGVP+++PFR ++DEA+WA+KY +L
Sbjct:    1 MRFKNKYKSCLWSRTNIWGDLLAKEETFLRPKWDSMIAILRSQKRRHRPLVNID----RYRHPICHDYKYLKPRSRANQVFKYNRIGYRNTLSILFCLRRFYGDLNHKMFKNFCKPALKSKDPSQMLLNSLEGRLDICLYRLGFFHSIYYSRQAILHNKVLINGKKIGHCGFVLQKGDYVEFCPSQRGAIKARLVARFKRFRSSYIRLERWRLSHRYKLQLHLQPTPNWIQTDYPSLSFIVCSEVGVPVMYPFRANIDEALWASKYSYL 265

[Close]

BLAST of mRNA_P-canaliculata_contig96961.23747.1 vs. uniprot
Match: A0A8F0FC76_9PHAE (Ribosomal protein S4 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0FC76_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 2.140e-139
Identity = 193/269 (71.75%), Postives = 226/269 (84.01%), Query Frame = 0

Query:    1 MRFKHRYKSCLWSRTDIWGDLLCKESTLLRPKWDTIMGFLSNQKRRRRPLSQIRLQNRRPTHPLSHDYRFIKPRARANQIFKYSRWGYRNTLSILFCLRRFYGDLNHRAFKRLCHSV----SPSQKLLGILEGRLDISLYRLGFFHSIFYSRQAILHNKVLVNGEKIGHGGFILQKGDYVEFCPTHRPAIRARLLARFKRYRSFRVRMERWRLSHRYKFELHLQPTPRWIQTDYPNLSFILSANVGVPLLFPFRVDVDEAVWAAKYGFL 265
            MRFK+RY SCLWSRTDIWGDLL KE+T LRPKWD++MG L +++RR RPL  +     R  HP+  DYRF+KPR+RANQIFKY+R GYRNTLSILFCLRRFYGDLNH AFK+ C        PSQ LLG LEGRLDI+LYRLGFFHSI+YSRQAILHNKVLVNG+++ HGGF+L KGDYVEFCP+ RPAI+ARLLAR+KR+RSF V MER RL  R ++EL LQPTP+WIQTDY NLSF+LSA V VP+++PFRVD+DEA+WA+KYGFL
Sbjct:    1 MRFKNRYNSCLWSRTDIWGDLLGKENTFLRPKWDSMMGILRSRRRRHRPLVNVN----RYRHPICQDYRFLKPRSRANQIFKYNRRGYRNTLSILFCLRRFYGDLNHTAFKKFCRPFFALKDPSQHLLGALEGRLDITLYRLGFFHSIYYSRQAILHNKVLVNGKRMAHGGFVLGKGDYVEFCPSERPAIQARLLARYKRFRSFVVLMERSRLPFRLRWELQLQPTPKWIQTDYSNLSFMLSAAVCVPVIYPFRVDIDEALWASKYGFL 265

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig96961.23747.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig96961.23747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
Q2TUG8_9PHAE	1.240e-187	92.19	Ribosomal protein S4 n=2 Tax=Desmarestia TaxID=313...	[more]
A0A8F0FCX2_9PHAE	2.000e-151	76.95	Ribosomal protein S4 n=2 Tax=Laminariales TaxID=28...	[more]
W5RG02_COSCS	6.080e-146	72.49	Ribosomal protein S4 n=9 Tax=Laminariales TaxID=28...	[more]
S4S3Q3_LAMHY	2.360e-143	71.75	Ribosomal protein S4 n=35 Tax=Laminariales TaxID=2...	[more]
A0A516ICH2_9PHAE	2.360e-143	71.38	Ribosomal protein S4 n=3 Tax=Lessonia TaxID=105411...	[more]
A0A8F0K0K8_9PHAE	3.350e-143	70.63	Ribosomal protein S4 n=3 Tax=Laminariales TaxID=28...	[more]
A0A8F0JZU7_9PHAE	4.750e-143	71.75	Ribosomal protein S4 n=1 Tax=Dictyoneurum californ...	[more]
A0A089MX47_PETFA	3.890e-142	69.89	Ribosomal protein S4 n=2 Tax=Scytosiphonaceae TaxI...	[more]
A0A0U1V7R9_9PHAE	3.190e-141	70.26	Ribosomal protein S4 n=1 Tax=Colpomenia peregrina ...	[more]
A0A8F0FC76_9PHAE	2.140e-139	71.75	Ribosomal protein S4 n=1 Tax=Chorda asiatica TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 129..191 e-value: 4.3E-11 score: 52.9
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 130..174 e-value: 9.1E-10 score: 38.1
IPR002942	RNA-binding S4 domain	PROSITE	PS50889	S4	coord: 129..200 score: 12.917
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 130..184 e-value: 2.3E-13 score: 52.2
None	No IPR available	GENE3D	1.10.1050.10		coord: 98..129 e-value: 2.3E-13 score: 52.2
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 44..226
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 105..237
IPR005709	Ribosomal protein S4, bacterial-type	PANTHER	PTHR11831:SF4	37S RIBOSOMAL PROTEIN NAM9, MITOCHONDRIAL	coord: 105..237

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig96961	contig	P-canaliculata_contig96961:128..925 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig96961.23747.1	mRNA_P-canaliculata_contig96961.23747.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig96961 128..925 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig96961.23747.1 ID=prot_P-canaliculata_contig96961.23747.1|Name=mRNA_P-canaliculata_contig96961.23747.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=266bp
MRFKHRYKSCLWSRTDIWGDLLCKESTLLRPKWDTIMGFLSNQKRRRRPL
SQIRLQNRRPTHPLSHDYRFIKPRARANQIFKYSRWGYRNTLSILFCLRR
FYGDLNHRAFKRLCHSVSPSQKLLGILEGRLDISLYRLGFFHSIFYSRQA
ILHNKVLVNGEKIGHGGFILQKGDYVEFCPTHRPAIRARLLARFKRYRSF
RVRMERWRLSHRYKFELHLQPTPRWIQTDYPNLSFILSANVGVPLLFPFR
VDVDEAVWAAKYGFL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002942	S4_RNA-bd
IPR036986	S4_RNA-bd_sf
IPR022801	Ribosomal_S4/S9
IPR005709	Ribosomal_S4_bac-type