prot_P-canaliculata_contig96916.23740.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig96916.23740.1
Unique Name	prot_P-canaliculata_contig96916.23740.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	172

Homology

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BLAST of mRNA_P-canaliculata_contig96916.23740.1 vs. uniprot
Match: A0A1V8SVG3_9PEZI (Sen15 domain-containing protein n=2 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8SVG3_9PEZI)

HSP 1 Score: 136 bits (343), Expect = 1.810e-37
Identity = 89/198 (44.95%), Postives = 120/198 (60.61%), Query Frame = 0

Query:    1 MPAAAPSPSALHSLL---PPPTTKTNTNPPDPLALQVAHNLRHQHAWSSLRLHQPSAXXXXXXXXXXRRPRPLLSGLPPRRLYTHPDELLA-----------ADTQLAPEREWVVPARVRERWSLAGVGAVFEGVG---GAEGGGGLFGE------GDGEGGGD----ARRVVLAAVEDDGTVVYYVVHDGVVKPRQN 171
            +P+AAP PSAL  L+   P P T ++ +    LALQ+AHNLR+QH W+ +RLH  +             PRPL++GLPP+RLY HPDE +A              ++ PEREWV+P  +RE+WSL   G VF+ V     A+GG GLFGE       +G+   +     +RV+LA ++DD TVVYY+VHDG+VKPRQN
Sbjct:    5 LPSAAPQPSALAKLIDANPAPPTSSHQSHLHYLALQIAHNLRYQHNWTDVRLHFNAQDSDNVF------PRPLITGLPPQRLYVHPDEQIALLQRQKDEGKTGMPEVHPEREWVLPTHLREKWSLRRFGEVFDKVSLVPTADGGKGLFGEQVNGHLANGQAKVNEWRTTKRVLLATLDDDSTVVYYIVHDGIVKPRQN 196

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BLAST of mRNA_P-canaliculata_contig96916.23740.1 vs. uniprot
Match: F9WWN6_ZYMTI (Sen15 domain-containing protein n=5 Tax=Zymoseptoria TaxID=1047167 RepID=F9WWN6_ZYMTI)

HSP 1 Score: 132 bits (333), Expect = 8.330e-36
Identity = 90/200 (45.00%), Postives = 111/200 (55.50%), Query Frame = 0

Query:    9 SALHSLL---PPPTTKTNTNPPDPLALQVAHNLRHQHAWSSLRLHQPSAXXXXXXXXXXRRPRPLLSGLPPRRLYTHPDELLA--------------ADTQLAPEREWVVPARVRERWSLAGVGAVFEGVG----GAEGGGGLFGEGDGEGGGDA----------------RRVVLAAVEDDGTVVYYVVHDGVVKPRQN 171
            SAL +LL   P P++  +T     LALQ+AHNL+HQH W+SLRLH  S+             RPLLSG+PP RLY HPDE +A              + T L PEREW++P+ +RE+WSL   G VF+G+G      EG   L  E  G  G D                 +RV+LA  +DD TVVYYVVHDGVVKPRQN
Sbjct:   17 SALQALLITNPLPSSSPHTTEHQHLALQIAHNLKHQHNWTSLRLHTYSSSKTPLS-------RPLLSGIPPSRLYVHPDEQIALLQRAKEQQPNGTPSLTSLKPEREWILPSHLREKWSLRKFGEVFDGIGVTPGSREGVEVLEEESRGRTGRDVNGMEKEEVGEWREKLPKRVLLATADDDSTVVYYVVHDGVVKPRQN 209

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BLAST of mRNA_P-canaliculata_contig96916.23740.1 vs. uniprot
Match: A0A1S8BHN3_9PEZI (Putative tRNA-splicing endonuclease subunit sen-15 n=2 Tax=Diplodia seriata TaxID=420778 RepID=A0A1S8BHN3_9PEZI)

HSP 1 Score: 132 bits (331), Expect = 1.340e-35
Identity = 87/179 (48.60%), Postives = 106/179 (59.22%), Query Frame = 0

Query:   16 PPPTTKTNTNPPDPLALQVAHNLRHQHAWSSLRLHQPSAXXXXXXXXXXRRPRPLLSGLPPRRLYTHPDE---LLAADTQL----------APEREWVVPARVRERWSLAGVGAVFEGVGGAEGGGGLFGE---GDGEGGGD-------ARRVVLAAVEDDGTVVYYVVHDGVVKPRQN 171
            PPP  +T  +    LALQV HNL HQH WS++RLH  S             PRPLLSGLPPRRLYTHPDE   +L  + +           APEREWV+P+ +RERW+L  +G VF+ VG       + GE    + E G D        +RVVLA +EDD TVVYY+VHDG+VKPRQN
Sbjct:   30 PPPAPQTTAH--HALALQVQHNLAHQHQWSAVRLHTHSPLAPHAPL-----PRPLLSGLPPRRLYTHPDEQMEMLKEEARRRKNGETIKEPAPEREWVLPSHLRERWTLRRMGDVFDAVGDVPPRTPVVGEEGAAEEEDGDDKPNKWRTTKRVVLAILEDDSTVVYYLVHDGLVKPRQN 201

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BLAST of mRNA_P-canaliculata_contig96916.23740.1 vs. uniprot
Match: A0A1J9RNH1_9PEZI (Trna-splicing endonuclease subunit sen-15 protein n=1 Tax=Diplodia corticola TaxID=236234 RepID=A0A1J9RNH1_9PEZI)

HSP 1 Score: 127 bits (319), Expect = 6.310e-34
Identity = 80/173 (46.24%), Postives = 100/173 (57.80%), Query Frame = 0

Query:   16 PPPTTKTNTNPPDPLALQVAHNLRHQHAWSSLRLHQPSAXXXXXXXXXXRRPRPLLSGLPPRRLYTHPDELLA-------------ADTQLAPEREWVVPARVRERWSLAGVGAVFEGVGG----AEGGGGLFGEGDGEGGGDARRVVLAAVEDDGTVVYYVVHDGVVKPRQN 171
            PPP  +T  +    LALQ+ HNLRHQH W++L+LH  S             PRPL+SGLPPRRLY HPDE +              A  +  PEREWV+P+ +RE+WSL  +G VF+ VG      EGG    G          +RV+L  +EDD TVVYY+VHDG+VKPRQN
Sbjct:   25 PPPAPQTTAH--HALALQIQHNLRHQHQWTALQLHTHSPLPPHAPL-----PRPLISGLPPRRLYVHPDEQMELLKEEARRKKRGEAVVEPVPEREWVLPSHLREKWSLRRMGDVFDAVGDIPPTVEGGIERDGAEQPNKWRTTKRVMLGILEDDSTVVYYLVHDGLVKPRQN 190

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BLAST of mRNA_P-canaliculata_contig96916.23740.1 vs. uniprot
Match: UPI000CE2396C (probable tRNA-splicing endonuclease subunit tsp-1 n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE2396C)

HSP 1 Score: 127 bits (319), Expect = 8.540e-34
Identity = 91/207 (43.96%), Postives = 117/207 (56.52%), Query Frame = 0

Query:    1 MPAAAPSPSALHSLLPPPTTKTNTNPPDP-----LALQVAHNLRHQHAWSSLRLHQPSAXXXXXXXXXXRRPRPLLSGLPPRRLYTHPDELLA-----------ADTQLAPEREWVVPARVRERWSLAGVGAVFEGVGGAEGGGG---LFGEGDGE---------GGGDA--------RRVVLAAVEDDGTVVYYVVHDGVVKPRQN 171
            M ++ P+PSAL +LL   + ++ ++  D      LALQ+AHNL HQH W+ LRL   S             PRP+LSGLPP+RLY HPDE LA              +LA EREWV+P+ +RERW+L  + AVF GV    G G    LF E + E          G DA        +R++LA ++DD TVVYY+VHDGVVKPRQN
Sbjct:    1 MVSSCPAPSALQTLLTTTSAQSTSDDTDAQHYHHLALQIAHNLHHQHHWTDLRLITHSTSDNLTL------PRPILSGLPPQRLYIHPDEQLAQLRAQHAGGRTGLPRLAREREWVLPSHLRERWTLRRMAAVFAGVEKVPGAGEGRVLFEEDEAERAEXXXXXXXGEDANPWRADLPKRLLLATLDDDSTVVYYIVHDGVVKPRQN 201

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BLAST of mRNA_P-canaliculata_contig96916.23740.1 vs. uniprot
Match: A0A6A6RE97_9PEZI (Sen15 domain-containing protein n=2 Tax=Mytilinidiaceae TaxID=281242 RepID=A0A6A6RE97_9PEZI)

HSP 1 Score: 126 bits (316), Expect = 2.480e-33
Identity = 84/202 (41.58%), Postives = 103/202 (50.99%), Query Frame = 0

Query:    6 PSPSALHSLLPPPTTKTNTNPPDPLALQVAHNLRHQHAWSSLRLHQPSAXXXXXXXXXXRRPRPLLSGLPPRRLYTHPDELL----------------------------------AADTQLAPEREWVVPARVRERWSLAGVGAVFEGVGGAEGGGGLFGEGDGEGGG--DARRVVLAAVEDDGTVVYYVVHDGVVKPRQN 171
            P+PS L       ++   +NP   LALQ+ HNL HQHAW+++RLH  S             PRPLLSGLPP RLYTHPDE +                                    D Q  PEREWV+P R+ ERWSL  +  VF+ +  +   G   G  + EG      +RVVLA V+ D TVVYY+VHDGVVKPRQN
Sbjct:   10 PTPSPLTKFF---SSNPTSNPLQTLALQIQHNLTHQHAWTAIRLHTHSTITNTPL------PRPLLSGLPPLRLYTHPDEQVQLLKEAEARRKAGRTKQAEKHTDAQEETDGAEPEGLDVQAEPEREWVLPTRLSERWSLKRLAEVFDAIELSPPPGAEHGADEEEGSKWRTTKRVVLATVDSDSTVVYYIVHDGVVKPRQN 202

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BLAST of mRNA_P-canaliculata_contig96916.23740.1 vs. uniprot
Match: A0A5N5D286_9PEZI (Putative tRNA-splicing endonuclease subunit tsp-1 n=1 Tax=Lasiodiplodia theobromae TaxID=45133 RepID=A0A5N5D286_9PEZI)

HSP 1 Score: 125 bits (313), Expect = 4.650e-33
Identity = 84/185 (45.41%), Postives = 101/185 (54.59%), Query Frame = 0

Query:   16 PPPTTKTNTNPPDPLALQVAHNLRHQHAWSSLRLHQPSAXXXXXXXXXXRRPRPLLSGLPPRRLYTHPDE---LLAADTQL----------APEREWVVPARVRERWSLAGVGAVFEGVG-------GAEGGGGLFGEGDGEGGGDA---------RRVVLAAVEDDGTVVYYVVHDGVVKPRQN 171
            PPP  +T  +    LALQ+ HNL+HQH W++L LH  S             PRPLLSGLPPRRLY HPDE   LL  D +           APEREWV+P+ +RE+WSL  +G VF+ VG       GAE               DA         +RV+L  +EDD TVVYY+VHDG VKPRQN
Sbjct:   25 PPPAPQTTAH--TALALQIQHNLQHQHQWTALTLHTHSPLPPHAAL-----PRPLLSGLPPRRLYIHPDEQIELLKEDARRKKKGESAEEPAPEREWVLPSHLREKWSLRRLGEVFDAVGEVPPLADGAE---------------DAGRPNKWRTTKRVMLGILEDDSTVVYYLVHDGPVKPRQN 187

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BLAST of mRNA_P-canaliculata_contig96916.23740.1 vs. uniprot
Match: A0A8H6L6A5_9LECA (Sen15 domain-containing protein n=1 Tax=Letharia columbiana TaxID=112416 RepID=A0A8H6L6A5_9LECA)

HSP 1 Score: 123 bits (309), Expect = 1.150e-32
Identity = 78/182 (42.86%), Postives = 108/182 (59.34%), Query Frame = 0

Query:    6 PSPSALHSLLPPPTTKTNTNPPDP-------LALQVAHNLRHQHAWSSLRLHQPSAXXXXXXXXXXRRPRPLLSGLPPRRLYTHPDELL------AADTQLAPEREWVVPARVRERWSLAGVGAVFEGVG---GAEGGGGLFGEGDGEGGGDARRVVLAAVEDDGTVVYYVVHDGVVKPRQN 171
            P PSAL S +      ++ +PP P       LALQ+ HNL++QH+W+SLR+H  S             PRPL+SG+PP+R+Y HPD+ L        D ++  EREWV+P  ++E+WSL     V + VG     + GG +  E  G+  G  +RV+LA + DD TVVYY+VHDG+VKPRQN
Sbjct:    2 PPPSALTSFI------SSHSPPSPHSPHHYNLALQILHNLQYQHSWTSLRIHTHSHLTNVSL------PRPLISGMPPKRIYVHPDQQLEELKAGVKDDEVEVEREWVLPTHLQEKWSLRRFAEVVDAVGEEPSEDHGGQITEEAKGKRRG-GKRVLLATLGDDSTVVYYIVHDGIVKPRQN 170

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BLAST of mRNA_P-canaliculata_contig96916.23740.1 vs. uniprot
Match: A0A1V8SNX7_9PEZI (Sen15 domain-containing protein n=2 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8SNX7_9PEZI)

HSP 1 Score: 123 bits (309), Expect = 2.380e-32
Identity = 84/195 (43.08%), Postives = 111/195 (56.92%), Query Frame = 0

Query:    1 MPAAAPSPSALHSLL---PPPTTKTNTNPPDPLALQVAHNLRHQHAWSSLRLHQPSAXXXXXXXXXXRRPRPLLSGLPPRRLYTHPDELLA-----------ADTQLAPEREWVVPARVRERWSLAGVGAVFEGVG---GAEGGGGLFGE--GDGEGGGDA--------RRVVLAAVEDDGTVVYYVVHDGVVKP 168
            +P+A P PSAL  L+   P P T  + +    LALQ+AHNLR+QH W+ +RLH                PRPL++G+PP+RLY HPDE +A              ++ PEREWV+P  +RE+WSL   G VF+ V     A+GG  LFGE        G A        RRV+LA ++DD T+VYY+VHDG+VKP
Sbjct:    5 LPSATPQPSALAGLIDANPAPPTSPHPSHLHHLALQIAHNLRYQHNWTDVRLHFDVEGSNDAL------PRPLITGVPPQRLYVHPDEQIALLQRQKDEGKTGMPEVHPEREWVLPTHLREKWSLRRFGEVFDKVSLVPTADGGKDLFGEQVNGYMANGHAKVNEWRTTRRVLLATLDDDSTIVYYIVHDGIVKP 193

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BLAST of mRNA_P-canaliculata_contig96916.23740.1 vs. uniprot
Match: A0A8H4IZV9_9PEZI (Putative tRNA-splicing endonuclease subunit sen-15 protein n=1 Tax=Botryosphaeria dothidea TaxID=55169 RepID=A0A8H4IZV9_9PEZI)

HSP 1 Score: 122 bits (306), Expect = 5.250e-32
Identity = 81/177 (45.76%), Postives = 98/177 (55.37%), Query Frame = 0

Query:   16 PPPTTKTNTNPPDPLALQVAHNLRHQHAWSSLRLHQPSAXXXXXXXXXXRRPRPLLSGLPPRRLYTHPDELL-----------AADTQLAP--EREWVVPARVRERWSLAGVGAVFEGVGGAEGGGGLFGEGDGEGGGDAR--------RVVLAAVEDDGTVVYYVVHDGVVKPRQN 171
            PPP  +T  +    LALQV HNL+HQH W+SL+LH  S             PRPLLSG+PPRRLY HPDE +           A +    P  EREWV+P  +RE+WSL  +G VF+  GG             EG  + R        RV+L  VEDD TVVYY+VHDG+VKPRQN
Sbjct:   26 PPPAPQTTAH--HALALQVQHNLQHQHQWTSLQLHTHSPLPPHAPL-----PRPLLSGMPPRRLYIHPDEQVEILKEEGRRKKAGEPVEEPGAEREWVLPTHLREKWSLRRMGEVFDAAGGVPPAP--------EGAAEERVNRWRTTKRVMLGIVEDDSTVVYYLVHDGLVKPRQN 187

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig96916.23740.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig96916.23740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1V8SVG3_9PEZI	1.810e-37	44.95	Sen15 domain-containing protein n=2 Tax=Rachiclado...	[more]
F9WWN6_ZYMTI	8.330e-36	45.00	Sen15 domain-containing protein n=5 Tax=Zymoseptor...	[more]
A0A1S8BHN3_9PEZI	1.340e-35	48.60	Putative tRNA-splicing endonuclease subunit sen-15...	[more]
A0A1J9RNH1_9PEZI	6.310e-34	46.24	Trna-splicing endonuclease subunit sen-15 protein ...	[more]
UPI000CE2396C	8.540e-34	43.96	probable tRNA-splicing endonuclease subunit tsp-1 ...	[more]
A0A6A6RE97_9PEZI	2.480e-33	41.58	Sen15 domain-containing protein n=2 Tax=Mytilinidi...	[more]
A0A5N5D286_9PEZI	4.650e-33	45.41	Putative tRNA-splicing endonuclease subunit tsp-1 ...	[more]
A0A8H6L6A5_9LECA	1.150e-32	42.86	Sen15 domain-containing protein n=1 Tax=Letharia c...	[more]
A0A1V8SNX7_9PEZI	2.380e-32	43.08	Sen15 domain-containing protein n=2 Tax=Rachiclado...	[more]
A0A8H4IZV9_9PEZI	5.250e-32	45.76	Putative tRNA-splicing endonuclease subunit sen-15...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018593	tRNA-splicing endonuclease subunit Sen15	PFAM	PF09631	Sen15	coord: 33..171 e-value: 3.2E-20 score: 72.3
None	No IPR available	PANTHER	PTHR28518	FAMILY NOT NAMED	coord: 19..171
IPR036167	tRNA intron endonuclease, catalytic domain-like superfamily	SUPERFAMILY	53032	tRNA-intron endonuclease catalytic domain-like	coord: 27..163

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig96916	contig	P-canaliculata_contig96916:546..1061 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig96916.23740.1	mRNA_P-canaliculata_contig96916.23740.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig96916 546..1061 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig96916.23740.1 ID=prot_P-canaliculata_contig96916.23740.1|Name=mRNA_P-canaliculata_contig96916.23740.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=172bp
MPAAAPSPSALHSLLPPPTTKTNTNPPDPLALQVAHNLRHQHAWSSLRLH
QPSAAATTTTTTTSRRPRPLLSGLPPRRLYTHPDELLAADTQLAPEREWV
VPARVRERWSLAGVGAVFEGVGGAEGGGGLFGEGDGEGGGDARRVVLAAV
EDDGTVVYYVVHDGVVKPRQN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018593	tRNA-endonuc_su_Sen15
IPR036167	tRNA_intron_Endo_cat-like_sf