prot_P-canaliculata_contig96899.23734.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig96899.23734.1
Unique Nameprot_P-canaliculata_contig96899.23734.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length178
Homology
BLAST of mRNA_P-canaliculata_contig96899.23734.1 vs. uniprot
Match: A0A517Y7C6_9BACT (Periplasmic repressor CpxP n=1 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517Y7C6_9BACT)

HSP 1 Score: 73.6 bits (179), Expect = 1.190e-12
Identity = 61/161 (37.89%), Postives = 96/161 (59.63%), Query Frame = 0
Query:    1 MRASMREMFSGMREELENATDEEKRERWSEVQEEMKAQYAELKPKVEAVLLPTQVQRLAEIKMQATVRQS---GGLTSERGGEALKDQLDLTDEQLAAMKAKAAEVSKSLEVKIAKLRKQAEAEVLSVLDTEQRAKYEELMGESYDVDALFQRGGRGGPGG 158
            +R SMRE F   R    + +++E+R ++ E ++  +AQ       V+AVLLP Q +RL ++ +Q++ R S   GG++     + L  +L +TD Q   ++ KA  V   L+ K+AKLR +A AE+LSVL  +QRAK E+L G  ++  A   + G+GGPGG
Sbjct:   79 IRDSMREAFRDFR----DLSEDERRTKFEEFRKNSEAQ-------VDAVLLPQQRERLKQLMIQSSARFSRSPGGIS-----DTLATELGITDAQKEELRKKAEAVQADLDKKLAKLRDEARAEILSVLTADQRAKLEKLTGSKFEFSA--PQFGQGGPGG 221          
BLAST of mRNA_P-canaliculata_contig96899.23734.1 vs. uniprot
Match: A0A847GXV6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GXV6_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 1.100e-6
Identity = 56/175 (32.00%), Postives = 93/175 (53.14%), Query Frame = 0
Query:   11 GMREELENATDEEKRERWSEVQEEMKAQYAELKPKVEAVLLPTQVQRLAEIKMQATVRQSGGLTSERGGEALKD-----QLDLTDEQL--------AAMKAKAA--------EVSKSLEVKIAKLRKQAEAEVLSVLDTEQRAKYEELMGESYDV-DALF---QRGGRGGPGGRG 160
            G R   +N +DEE+++ + E++E  + Q A    K+  +LLP Q++R+ +I +Q            RG  AL D     +L ++DEQ         A+M+A  A        +  + +  K+  +RKQAE +VL+VL  +Q+A++E++ GES+ + +  F    R GRGG  GRG
Sbjct:   86 GQRANFQNMSDEERQKAFGEMRERREKQTASANAKLAEILLPHQIKRIEQISLQT-----------RGLAALSDPKIAAELKISDEQKKKLEEARNASMEAMRAMFQGGNRDQDREQMRAKMQDMRKQAEEKVLAVLTADQKAQFEKMKGESFQMPEGAFGPGSRPGRGGEAGRG 249          
BLAST of mRNA_P-canaliculata_contig96899.23734.1 vs. uniprot
Match: A0A5B9P8U1_9BACT (Uncharacterized protein n=1 Tax=Mariniblastus fucicola TaxID=980251 RepID=A0A5B9P8U1_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 2.240e-6
Identity = 35/94 (37.23%), Postives = 58/94 (61.70%), Query Frame = 0
Query:   49 VLLPTQVQRLAEIKMQATVRQSGGLTSERGGEALKDQLDLTDEQLAAMKAKAAEVSKSLEVKIAKLRKQAEAEVLSVLDTEQRAKYEELMGESY 142
            VLLP Q++RL EI  QA  ++ G +T  +     KD  D+  +QL + + +A ++   L   I KL+ +A  ++LS L ++QRAKY++L GE++
Sbjct:   34 VLLPHQIKRLKEISFQALEKEYGIMTVLQSSRIRKD-FDIGTDQLTSFQQEAKKIENKLAEDIEKLKTKARQDLLSHLSSDQRAKYDDLHGETF 126          
BLAST of mRNA_P-canaliculata_contig96899.23734.1 vs. uniprot
Match: A0A358N687_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Rhodopirellula sp. TaxID=2024855 RepID=A0A358N687_9BACT)

HSP 1 Score: 53.5 bits (127), Expect = 1.470e-5
Identity = 49/153 (32.03%), Postives = 85/153 (55.56%), Query Frame = 0
Query:   18 NATDEEKRERWSEVQEEMKAQYAELKPKVEAVLLPTQVQRLAEIKMQ----ATVRQSGGLTSERGGEALKDQLDLTDEQLAAMKAKAAEVSKSL----------EVKIAKLRKQAEAEVLSVLDTEQRAKYEELMGESYDV-DALFQRGGRGG 155
            N ++EE+ E +++++++ + + A++K ++E VL P Q++RL EI +Q    A +R        +  EA K +L+   E  A M  K  E  + L            KI ++R   E +VL VL ++Q+ K+EE+ GE +++ +  F RGGRGG
Sbjct:   43 NMSEEERTEFFTKMRKQAEERNAKMKEQLEEVLFPEQLERLQEINIQLQGIAALRNPDVAKELKITEAQKKELE---EVQAGMMEKMREGMRELFTGGGGREGMREKIQEMRDDMEGDVLDVLTSDQKKKFEEMKGEKFEMPEGAFGRGGRGG 192          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig96899.23734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A517Y7C6_9BACT1.190e-1237.89Periplasmic repressor CpxP n=1 Tax=Anatilimnocola ... [more]
A0A847GXV6_9BACT1.100e-632.00Uncharacterized protein n=1 Tax=Candidatus Anammox... [more]
A0A5B9P8U1_9BACT2.240e-637.23Uncharacterized protein n=1 Tax=Mariniblastus fuci... [more]
A0A358N687_9BACT1.470e-532.03Uncharacterized protein (Fragment) n=1 Tax=Rhodopi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..22
NoneNo IPR availableCOILSCoilCoilcoord: 97..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig96899contigP-canaliculata_contig96899:267..800 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig96899.23734.1mRNA_P-canaliculata_contig96899.23734.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig96899 267..800 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig96899.23734.1 ID=prot_P-canaliculata_contig96899.23734.1|Name=mRNA_P-canaliculata_contig96899.23734.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=178bp
MRASMREMFSGMREELENATDEEKRERWSEVQEEMKAQYAELKPKVEAVL
LPTQVQRLAEIKMQATVRQSGGLTSERGGEALKDQLDLTDEQLAAMKAKA
AEVSKSLEVKIAKLRKQAEAEVLSVLDTEQRAKYEELMGESYDVDALFQR
GGRGGPGGRGGADGGRGGRGGADGGRGG
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