prot_P-canaliculata_contig96871.23729.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig96871.23729.1
Unique Nameprot_P-canaliculata_contig96871.23729.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length248
Homology
BLAST of mRNA_P-canaliculata_contig96871.23729.1 vs. uniprot
Match: UPI000372AE03 (CusA/CzcA family heavy metal efflux RND transporter n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI000372AE03)

HSP 1 Score: 444 bits (1141), Expect = 4.750e-146
Identity = 223/248 (89.92%), Postives = 237/248 (95.56%), Query Frame = 0
Query:    1 MSEHNIDNLAGNDPSKSAIAKLIAWSVANQLIIIVIAIALAVGGWLSLKEMPLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRGASMFGTSFVYVIFEDSVDPYWARSRVVEALSRLGSELPENANPQIGPDATGVGWIYQYALVDKTGQTDLAELRSLQDWFLKLELSGVEGVSEVASVGGFEREYQVLIDPNQLESFNVSIDQLSRAIRAASSEVGGRVLEQGETEYVI 248
            M+   +DNLAG DPSKSAIAKLIAWSVANQLIIIV+A+ALA+GGWLSLK MPLDA+PDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRG+SMFGTSFVYVIFED VDPYWARSRVVEALSRLGSELPE A PQIGPDATGVGW+YQYALVDKTGQTDLAELRSLQDWFLKLELSGVEGVSEVASVGGFEREYQVLIDPN+L+S+ VSI +L+R IR+ASSEVGGRVLEQGETEYVI
Sbjct:    1 MTTEKLDNLAGKDPSKSAIAKLIAWSVANQLIIIVLALALAMGGWLSLKNMPLDAVPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRGSSMFGTSFVYVIFEDDVDPYWARSRVVEALSRLGSELPETAIPQIGPDATGVGWVYQYALVDKTGQTDLAELRSLQDWFLKLELSGVEGVSEVASVGGFEREYQVLIDPNKLKSYGVSISELARTIRSASSEVGGRVLEQGETEYVI 248          
BLAST of mRNA_P-canaliculata_contig96871.23729.1 vs. uniprot
Match: A0A8J3CTI4_9PROT (Cation transporter n=2 Tax=Robiginitomaculaceae TaxID=2800062 RepID=A0A8J3CTI4_9PROT)

HSP 1 Score: 439 bits (1130), Expect = 1.860e-144
Identity = 223/248 (89.92%), Postives = 238/248 (95.97%), Query Frame = 0
Query:    1 MSEHNIDNLAGNDPSKSAIAKLIAWSVANQLIIIVIAIALAVGGWLSLKEMPLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRGASMFGTSFVYVIFEDSVDPYWARSRVVEALSRLGSELPENANPQIGPDATGVGWIYQYALVDKTGQTDLAELRSLQDWFLKLELSGVEGVSEVASVGGFEREYQVLIDPNQLESFNVSIDQLSRAIRAASSEVGGRVLEQGETEYVI 248
            MS+   +NLAG DPSKSA+AKLI WSVANQLII+V+A+ALAV GW+SLK MPLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRG+SMFGTSFVYVIFEDSVDPYWARSRVVEALSRLGSELP+NA PQIGPDATGVGWIYQYALVDK+G+TDLAELRSLQDWFLKLELSGVEGVSEVASVGGFEREYQVLIDPNQLES++V+I  L+RAIRAASSEVGGRVLEQGETEYVI
Sbjct:    1 MSKVTGENLAGRDPSKSAVAKLIGWSVANQLIIVVMALALAVAGWISLKNMPLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRGSSMFGTSFVYVIFEDSVDPYWARSRVVEALSRLGSELPDNAVPQIGPDATGVGWIYQYALVDKSGRTDLAELRSLQDWFLKLELSGVEGVSEVASVGGFEREYQVLIDPNQLESYDVTIATLARAIRAASSEVGGRVLEQGETEYVI 248          
BLAST of mRNA_P-canaliculata_contig96871.23729.1 vs. uniprot
Match: A0A2E8A9S3_9GAMM (CusA/CzcA family heavy metal efflux RND transporter (Fragment) n=1 Tax=Marinobacter sp. TaxID=50741 RepID=A0A2E8A9S3_9GAMM)

HSP 1 Score: 403 bits (1036), Expect = 3.610e-135
Identity = 198/248 (79.84%), Postives = 227/248 (91.53%), Query Frame = 0
Query:    1 MSEHNIDNLAGNDPSKSAIAKLIAWSVANQLIIIVIAIALAVGGWLSLKEMPLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRGASMFGTSFVYVIFEDSVDPYWARSRVVEALSRLGSELPENANPQIGPDATGVGWIYQYALVDKTGQTDLAELRSLQDWFLKLELSGVEGVSEVASVGGFEREYQVLIDPNQLESFNVSIDQLSRAIRAASSEVGGRVLEQGETEYVI 248
            MS+ + D+LAG DPSKS IAKLI+WS++NQLI++ +A ALA+ GWL+L   PLDA+PDLTDTQ+IIRT+FPGQSPQIVEDLVTYPLSTN+LGLPKTKDVRGASMFGTSFVYVIFED VD YWARSRVVEALSRLGSELP  A PQIGPDATGVGW+YQYALVDKTG TDLA+LRSLQDWFLKLEL+GVEGVSEVASVGGF REYQVLIDPN+L +++V + ++S A++AASSEVGGRVLEQGE+E+VI
Sbjct:    1 MSDPHSDDLAGRDPSKSGIAKLISWSISNQLIVLTLAAALAISGWLALDRTPLDAVPDLTDTQIIIRTDFPGQSPQIVEDLVTYPLSTNMLGLPKTKDVRGASMFGTSFVYVIFEDDVDLYWARSRVVEALSRLGSELPPGAVPQIGPDATGVGWVYQYALVDKTGGTDLAQLRSLQDWFLKLELAGVEGVSEVASVGGFVREYQVLIDPNRLRAYDVPLRRISEAVKAASSEVGGRVLEQGESEFVI 248          
BLAST of mRNA_P-canaliculata_contig96871.23729.1 vs. uniprot
Match: A0A2D8YE18_9PROT (CusA/CzcA family heavy metal efflux RND transporter n=29 Tax=Proteobacteria TaxID=1224 RepID=A0A2D8YE18_9PROT)

HSP 1 Score: 405 bits (1042), Expect = 2.270e-131
Identity = 198/248 (79.84%), Postives = 230/248 (92.74%), Query Frame = 0
Query:    1 MSEHNIDNLAGNDPSKSAIAKLIAWSVANQLIIIVIAIALAVGGWLSLKEMPLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRGASMFGTSFVYVIFEDSVDPYWARSRVVEALSRLGSELPENANPQIGPDATGVGWIYQYALVDKTGQTDLAELRSLQDWFLKLELSGVEGVSEVASVGGFEREYQVLIDPNQLESFNVSIDQLSRAIRAASSEVGGRVLEQGETEYVI 248
            M+EHN + LAG+DPSKS +AKLI+WSV NQLI++++A ALAV GW++++  PLDA+PDLTDTQVIIRT+FPGQSPQIVEDLVTYPLSTNLLGLP+TKDVRG+SMFGTSFVYVIFED VD YWARSRV+EALSRLGS+LP+ A PQIGPDATGVGW+YQYALVDKTG TDLAELRSLQDWFLKLEL+GVEGV+EVASVGGF REYQVL+DPN+L S+++SI ++  A++AASSEVGGRVLEQGETEYVI
Sbjct:    1 MTEHNSEELAGHDPSKSWVAKLISWSVYNQLIVLMLAAALAVTGWMAIQRTPLDAVPDLTDTQVIIRTDFPGQSPQIVEDLVTYPLSTNLLGLPRTKDVRGSSMFGTSFVYVIFEDDVDMYWARSRVLEALSRLGSDLPDGAVPQIGPDATGVGWVYQYALVDKTGNTDLAELRSLQDWFLKLELAGVEGVAEVASVGGFVREYQVLLDPNRLRSYDLSITRIRDAVQAASSEVGGRVLEQGETEYVI 248          
BLAST of mRNA_P-canaliculata_contig96871.23729.1 vs. uniprot
Match: A0A2D8ZUG3_9PROT (CusA/CzcA family heavy metal efflux RND transporter n=6 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A2D8ZUG3_9PROT)

HSP 1 Score: 404 bits (1039), Expect = 6.290e-131
Identity = 199/248 (80.24%), Postives = 228/248 (91.94%), Query Frame = 0
Query:    1 MSEHNIDNLAGNDPSKSAIAKLIAWSVANQLIIIVIAIALAVGGWLSLKEMPLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRGASMFGTSFVYVIFEDSVDPYWARSRVVEALSRLGSELPENANPQIGPDATGVGWIYQYALVDKTGQTDLAELRSLQDWFLKLELSGVEGVSEVASVGGFEREYQVLIDPNQLESFNVSIDQLSRAIRAASSEVGGRVLEQGETEYVI 248
            MS+ +ID+LAG DPSKS IAKLI+WS++NQLI++ +A ALAV GWL+++  PLDA+PDLTDTQ+IIRT+FPGQSPQIVEDLVTYPLSTN+LGLPKTKDVRGASMFGTSFVYVIFED VD YWARSRVVEALSRLGSELP  A PQIGPDATGVGW+YQYALVDKTG TDLAELRSLQDWFLKLEL+GVEGVSEVASVGGF REYQVLIDPN+L +++V + ++S A++AASSEVGGRVLEQ E+E+VI
Sbjct:    1 MSDPHIDDLAGRDPSKSGIAKLISWSISNQLIVLTLAAALAVAGWLAVERTPLDAVPDLTDTQIIIRTDFPGQSPQIVEDLVTYPLSTNMLGLPKTKDVRGASMFGTSFVYVIFEDDVDLYWARSRVVEALSRLGSELPPGAVPQIGPDATGVGWVYQYALVDKTGGTDLAELRSLQDWFLKLELAGVEGVSEVASVGGFVREYQVLIDPNRLRAYDVPLRRISEAVKAASSEVGGRVLEQAESEFVI 248          
BLAST of mRNA_P-canaliculata_contig96871.23729.1 vs. uniprot
Match: A0A062U4G3_9PROT (Cation transporter n=2 Tax=Hyphomonas TaxID=85 RepID=A0A062U4G3_9PROT)

HSP 1 Score: 402 bits (1032), Expect = 6.780e-130
Identity = 199/248 (80.24%), Postives = 227/248 (91.53%), Query Frame = 0
Query:    1 MSEHNIDNLAGNDPSKSAIAKLIAWSVANQLIIIVIAIALAVGGWLSLKEMPLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRGASMFGTSFVYVIFEDSVDPYWARSRVVEALSRLGSELPENANPQIGPDATGVGWIYQYALVDKTGQTDLAELRSLQDWFLKLELSGVEGVSEVASVGGFEREYQVLIDPNQLESFNVSIDQLSRAIRAASSEVGGRVLEQGETEYVI 248
            MS  +  +LAG DPS+S+IA+LI+WSVANQLI++ +A+ALAV GWL+++  PLDAIPDLTDTQVIIRT+FPGQSPQIVEDLVTYPLST+LLGLP+TKDVRGASMFGTSF+YVIFED VD YWARSRVVEALSRLGSELP  A PQIGPDATGVGWIYQYALVDKTG TDLAELRSLQDWFLKLELSGVEGV+EVASVGGF RE+QVL+DPN+L +FNV I +++ A+R+AS EVGGRVLEQGETE+VI
Sbjct:    1 MSASSDQDLAGRDPSQSSIARLISWSVANQLIVMTLAVALAVAGWLAIQNTPLDAIPDLTDTQVIIRTDFPGQSPQIVEDLVTYPLSTSLLGLPRTKDVRGASMFGTSFIYVIFEDDVDLYWARSRVVEALSRLGSELPAGATPQIGPDATGVGWIYQYALVDKTGGTDLAELRSLQDWFLKLELSGVEGVAEVASVGGFVREFQVLVDPNRLRAFNVPIRRVAEAVRSASGEVGGRVLEQGETEFVI 248          
BLAST of mRNA_P-canaliculata_contig96871.23729.1 vs. uniprot
Match: A0A7X3TLH2_9GAMM (Efflux RND transporter permease subunit (Fragment) n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7X3TLH2_9GAMM)

HSP 1 Score: 385 bits (988), Expect = 1.770e-128
Identity = 189/243 (77.78%), Postives = 218/243 (89.71%), Query Frame = 0
Query:    6 IDNLAGNDPSKSAIAKLIAWSVANQLIIIVIAIALAVGGWLSLKEMPLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRGASMFGTSFVYVIFEDSVDPYWARSRVVEALSRLGSELPENANPQIGPDATGVGWIYQYALVDKTGQTDLAELRSLQDWFLKLELSGVEGVSEVASVGGFEREYQVLIDPNQLESFNVSIDQLSRAIRAASSEVGGRVLEQGETEYVI 248
            ++ LAG DP+ SAIA+LIAWS  N +I++ +A  LA+ GWLSL+  PLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLS N+LGLP+TKDVRG+SMFGTSFVYVIFED VD YW RSRVVEALSRL +ELP  A PQIGPDATGVGWIYQYALVD+TG+TDLA+LRSLQDWFLK EL+GV+GV+EVASVGGF REYQVLIDPN+L +++VSI ++S A+RAASSEVGGRVLEQGE+E+VI
Sbjct:    6 VNELAGRDPTDSAIARLIAWSADNPVIVLTLAAGLALAGWLSLERTPLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSANMLGLPRTKDVRGSSMFGTSFVYVIFEDDVDLYWGRSRVVEALSRLSTELPPGARPQIGPDATGVGWIYQYALVDETGRTDLAQLRSLQDWFLKFELAGVDGVAEVASVGGFVREYQVLIDPNKLRAYDVSIRRISEAVRAASSEVGGRVLEQGESEFVI 248          
BLAST of mRNA_P-canaliculata_contig96871.23729.1 vs. uniprot
Match: A0A6N8V2A6_9PROT (Efflux RND transporter permease subunit (Fragment) n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6N8V2A6_9PROT)

HSP 1 Score: 375 bits (963), Expect = 3.550e-128
Identity = 185/242 (76.45%), Postives = 216/242 (89.26%), Query Frame = 0
Query:    7 DNLAGNDPSKSAIAKLIAWSVANQLIIIVIAIALAVGGWLSLKEMPLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRGASMFGTSFVYVIFEDSVDPYWARSRVVEALSRLGSELPENANPQIGPDATGVGWIYQYALVDKTGQTDLAELRSLQDWFLKLELSGVEGVSEVASVGGFEREYQVLIDPNQLESFNVSIDQLSRAIRAASSEVGGRVLEQGETEYVI 248
            D L G DPS+SA+A+LIAWS+ N +I++++A AL   GWL+++  PLDAIPDLTDTQVIIRT+FPGQSPQIVEDLVTYPLSTNLLGLP+TKDVRG+SMFGTSFVYVIFED VD YW R+RVVEALSRLGSELP  A PQIGPDATGVGWI+QYALVD++ + DLAELRSLQD +LKLEL+GVEGV+EVASVGGF REYQVLIDPNQL + ++SI ++  A+RAASSEVGGRVLEQGE+E+VI
Sbjct:   38 DRLTGRDPSRSAVARLIAWSIENPVIVLMLASALGAAGWLAMQRTPLDAIPDLTDTQVIIRTDFPGQSPQIVEDLVTYPLSTNLLGLPRTKDVRGSSMFGTSFVYVIFEDDVDLYWGRARVVEALSRLGSELPPGATPQIGPDATGVGWIFQYALVDRSRRPDLAELRSLQDSYLKLELAGVEGVAEVASVGGFVREYQVLIDPNQLRAHDISIRRIVAAVRAASSEVGGRVLEQGESEFVI 279          
BLAST of mRNA_P-canaliculata_contig96871.23729.1 vs. uniprot
Match: UPI0019B718DE (Cation transporter n=2 Tax=Parvularcula lutaonensis TaxID=491923 RepID=UPI0019B718DE)

HSP 1 Score: 394 bits (1013), Expect = 4.270e-127
Identity = 193/248 (77.82%), Postives = 225/248 (90.73%), Query Frame = 0
Query:    1 MSEHNIDNLAGNDPSKSAIAKLIAWSVANQLIIIVIAIALAVGGWLSLKEMPLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRGASMFGTSFVYVIFEDSVDPYWARSRVVEALSRLGSELPENANPQIGPDATGVGWIYQYALVDKTGQTDLAELRSLQDWFLKLELSGVEGVSEVASVGGFEREYQVLIDPNQLESFNVSIDQLSRAIRAASSEVGGRVLEQGETEYVI 248
            MSE   +NL G+DPS+SA+A+LI WSVANQLI++V A AL + GWL ++  PLDAIPDLTDTQVIIRT+FPGQSPQIVEDLVTYPLS+NLLGLPKTKDVRG+SMFGTSFVYVIFED VD YWARSRV+EALSR+G ELPE A PQIGPDATGVGW+YQYALVD+TG TDLAELRS+QDWF+KLELSGVEGV+EVASVGGFEREYQVL+DPN+L ++++ I +L+ A+R ASSEVGGR+LEQGE+E+VI
Sbjct:    1 MSETANENLTGHDPSRSAVARLIEWSVANQLIVLVAAAALGLFGWLGMRATPLDAIPDLTDTQVIIRTDFPGQSPQIVEDLVTYPLSSNLLGLPKTKDVRGSSMFGTSFVYVIFEDGVDLYWARSRVLEALSRIGPELPETAVPQIGPDATGVGWVYQYALVDRTGGTDLAELRSIQDWFIKLELSGVEGVAEVASVGGFEREYQVLLDPNRLRAYDIPITRLAAAMRTASSEVGGRILEQGESEFVI 248          
BLAST of mRNA_P-canaliculata_contig96871.23729.1 vs. uniprot
Match: A0A2D7KHJ3_9PROT (CusA/CzcA family heavy metal efflux RND transporter n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2D7KHJ3_9PROT)

HSP 1 Score: 394 bits (1012), Expect = 5.760e-127
Identity = 194/241 (80.50%), Postives = 221/241 (91.70%), Query Frame = 0
Query:    8 NLAGNDPSKSAIAKLIAWSVANQLIIIVIAIALAVGGWLSLKEMPLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRGASMFGTSFVYVIFEDSVDPYWARSRVVEALSRLGSELPENANPQIGPDATGVGWIYQYALVDKTGQTDLAELRSLQDWFLKLELSGVEGVSEVASVGGFEREYQVLIDPNQLESFNVSIDQLSRAIRAASSEVGGRVLEQGETEYVI 248
            +L+G DP+KS +A LI WSVANQLI++V+A ALAV GWL+++  PLDA+PDLTDTQVIIRT+FPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRG+SMFGTSFVYVIFED VD YWARSRV+EALSRLGSELPE A PQIGPDATGVGW+YQYALVD++G TDLAELRSLQDWFLKLELSGVEGV+EVASVGGF REYQVL+DPN+L S+ +SI ++  A+RAASSEVGGRV+EQ ETE+VI
Sbjct:    6 DLSGRDPAKSWVAGLIGWSVANQLIVLVLAAALAVSGWLAVQNTPLDAVPDLTDTQVIIRTDFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVRGSSMFGTSFVYVIFEDDVDLYWARSRVLEALSRLGSELPEGAVPQIGPDATGVGWVYQYALVDRSGNTDLAELRSLQDWFLKLELSGVEGVAEVASVGGFVREYQVLLDPNRLRSYGISIARIRAAVRAASSEVGGRVIEQAETEFVI 246          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig96871.23729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000372AE034.750e-14689.92CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A8J3CTI4_9PROT1.860e-14489.92Cation transporter n=2 Tax=Robiginitomaculaceae Ta... [more]
A0A2E8A9S3_9GAMM3.610e-13579.84CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A2D8YE18_9PROT2.270e-13179.84CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A2D8ZUG3_9PROT6.290e-13180.24CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A062U4G3_9PROT6.780e-13080.24Cation transporter n=2 Tax=Hyphomonas TaxID=85 Rep... [more]
A0A7X3TLH2_9GAMM1.770e-12877.78Efflux RND transporter permease subunit (Fragment)... [more]
A0A6N8V2A6_9PROT3.550e-12876.45Efflux RND transporter permease subunit (Fragment)... [more]
UPI0019B718DE4.270e-12777.82Cation transporter n=2 Tax=Parvularcula lutaonensi... [more]
A0A2D7KHJ3_9PROT5.760e-12780.50CusA/CzcA family heavy metal efflux RND transporte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001036Acriflavin resistance proteinPRINTSPR00702ACRIFLAVINRPcoord: 29..53
score: 22.6
coord: 57..75
score: 28.68
IPR001036Acriflavin resistance proteinPFAMPF00873ACR_trancoord: 23..246
e-value: 5.9E-50
score: 169.9
IPR001036Acriflavin resistance proteinPANTHERPTHR32063FAMILY NOT NAMEDcoord: 19..248
IPR027463Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomainsGENE3D3.30.2090.10coord: 199..242
e-value: 2.5E-55
score: 189.9
NoneNo IPR availableGENE3D3.30.70.1320coord: 152..198
e-value: 2.5E-55
score: 189.9
NoneNo IPR availableGENE3D1.20.1640.10coord: 30..58
e-value: 2.5E-55
score: 189.9
NoneNo IPR availableGENE3D3.30.70.1430coord: 59..151
e-value: 2.5E-55
score: 189.9
NoneNo IPR availablePANTHERPTHR32063:SF19CATION EFFLUX SYSTEM PROTEIN CUSAcoord: 19..248
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..248
NoneNo IPR availableSUPERFAMILY82693Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomainscoord: 61..146
NoneNo IPR availableSUPERFAMILY82693Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomainscoord: 154..222
NoneNo IPR availableTMHMMTMhelixcoord: 25..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig96871contigP-canaliculata_contig96871:351..1094 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig96871.23729.1mRNA_P-canaliculata_contig96871.23729.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig96871 351..1094 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig96871.23729.1 ID=prot_P-canaliculata_contig96871.23729.1|Name=mRNA_P-canaliculata_contig96871.23729.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=248bp
MSEHNIDNLAGNDPSKSAIAKLIAWSVANQLIIIVIAIALAVGGWLSLKE
MPLDAIPDLTDTQVIIRTEFPGQSPQIVEDLVTYPLSTNLLGLPKTKDVR
GASMFGTSFVYVIFEDSVDPYWARSRVVEALSRLGSELPENANPQIGPDA
TGVGWIYQYALVDKTGQTDLAELRSLQDWFLKLELSGVEGVSEVASVGGF
EREYQVLIDPNQLESFNVSIDQLSRAIRAASSEVGGRVLEQGETEYVI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001036Acrflvin-R
IPR027463AcrB_DN_DC_subdom