prot_P-canaliculata_contig9687.23728.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9687.23728.1
Unique Nameprot_P-canaliculata_contig9687.23728.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length537
Homology
BLAST of mRNA_P-canaliculata_contig9687.23728.1 vs. uniprot
Match: A0A6H5KS39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS39_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 8.970e-103
Identity = 255/574 (44.43%), Postives = 298/574 (51.92%), Query Frame = 0
Query:    1 MPDVDSPQITGILEQGSTTNGV----VIGLH-LSKRHRDEASPPPGKRGRAENTDKSLTLQIPVP---SAPL-PTSFGNGSPQAPAPLCESPIANQASSTPTAGFA--AAVLGDDGVVKHTENSPTEPALPAAMPSVTPGGAGLGASKRKSRVPATAAPSVGATGPIFHAAILRVLHRRGGITCPEAKEWSWRGGASTRFDHWPSSLHPAVMDLLASVTASEERVALAGCDA-HDSACRDDDGRITQLTPPLFPPPPSSARRGAAWRAPVPRTPVR---RASAIGPRITFP-ATPGSHPRAMAVDPGMTPLSALRRPGSARRSEG-SRVRFSTHDMSVVDTPDPARDGSEKGMVSAMDGLESILMAAEEVQRLVARGRSNVSGVESA--EERAGS--RRYEGYFDRFGATASCDAEEPVVGVGSPTEEDSALASLSYSGGGQQISDENSEGGHSIGQADQRG-------DGPQPGDESSVLEDAAALVSVLDEMACSDSAPEEVTLAGGWGPEHSNAAAFYATELALLCG---------VDPRAQASEPGTVRSHLRSRYLDVLSCLVRYNLKV 537
            MPD+D+PQI+GI E+ +         V+G+   SKR RDE SP  GKRGR  N D SL+L+I VP   S+PL P+S    SP    PLCESP     + +P A ++  A                          SVT        S+RK R+P  A PS+GAT PIFHAA+LR+LHRR G  C EA  W WRG    RFDHWP +LHP+VMDLLA V+ASEE+V L GCD  H  +C                         AAWRAP PRTP     R +A    +T P A P   P   +     TPLSALRR GS+RR    +RVRFSTHDMSVVDTPDP R GS KGM+SA+ GLESIL AAE ++ L A G  N  G E    E R G   R+YEGYFDRF A                                                            D P   +  SV ED+AA V+VL+E+A  D+AP EV LAGGWGPEH NAAAFYA ELA LCG         V  R  +   G V SHLR RYLDVLSCLVRYNLK+
Sbjct:    1 MPDMDTPQISGIFEERAPXXXXXXXXVVGVQQASKRPRDEGSPVRGKRGRGANGDISLSLKISVPATSSSPLVPSSSLPASPLWVPPLCESPSKINQAPSPFASYSSGAXXXXXXXXXXXXXXXXXXXXXXXXXASVT--------SRRKGRMPHAAPPSLGATDPIFHAALLRLLHRRNGDHCAEAVGWRWRGDTPARFDHWPCALHPSVMDLLACVSASEEQVVLTGCDKKHAESCNGXXXXXXXXX------------XEAAWRAPRPRTPWAHRGRPAAAAAGVTTPIAAPSPLPPXASAQ---TPLSALRRSGSSRRLPSKNRVRFSTHDMSVVDTPDPQRGGSAKGMMSALGGLESILSAAERIRELAAGGPGNSGGRERGGLERRGGDDGRQYEGYFDRFSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFDAPLETEAKSVREDSAAFVTVLEEIANGDAAPGEVALAGGWGPEHRNAAAFYAEELAFLCGTKTGVSGREVGGRFVSGGGGAVGSHLRVRYLDVLSCLVRYNLKL 551          
BLAST of mRNA_P-canaliculata_contig9687.23728.1 vs. uniprot
Match: D8LQ83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ83_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 1.480e-64
Identity = 172/418 (41.15%), Postives = 193/418 (46.17%), Query Frame = 0
Query:  142 VPATAAPSVGATGPIFHAAILRVLHRRGGITCPEAKEWSWRGGASTRFDHWPSSLHPAVMDLLASVTASEERVALAGCDA-HDSACRDDDGRITQLTPPLFPPPPSSARRGAAWRAPVPRTP-VRRASAIGPRITFPATPGSHPRAMAVDPGMTPLSALRRPGSARRSEG-SRVRFSTHDMSVVDTPDPARDGSEKGMVSAMDGLESILMAAEEVQRLVARGRSNVSGVESAEERAGSRRYEGYFDRFGATASCDAEEPVVGVGSPTEEDSALASLSYSGGGQQISDENSEGGHSIGQADQRG-----------DGPQPGDESSVLEDAAALVSVLDEMACSDSAPEEVTLAGGWGPEHSNAAAFYATELALLCGVDPRAQASE---------PGTVRSHLRSRYLDVLSCLVRYNLK 536
            +P  A PS+GAT PIFHAA+LR+LH R G  C EA  W WRG    RFDHWP +LHP+VMDLLA V+ASEE+V L GCD  H  +C                         AAWRAP PRTP   R                               ALRR GS+RR    +RVRFSTHDMSVVDTPDP R GS KGM+SA+ GLESIL AAE ++ L A G  N                                                                                         D P   +  SV ED+AA V+VL+E+A  D+AP EVTLAGGWGPEH NAAAFYA ELA L G        E          G V SHLR RYLDVLSCLVRYNLK
Sbjct:    1 MPHAAPPSLGATDPIFHAALLRLLHSRNGDHCAEAVGWRWRGDTPARFDHWPCALHPSVMDLLACVSASEEQVVLTGCDKKHADSCHGXXXXXXXXX----------XXXEAAWRAPRPRTPWAHRGGPAAVPAGATTXXXXXXXXXXXXXXXXXXXALRRSGSSRRLPSKNRVRFSTHDMSVVDTPDPQRGGSAKGMMSALGGLESILSAAERIRELAAGGPGNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVDAPLEAEARSVREDSAAFVTVLEEIANGDAAPGEVTLAGGWGPEHRNAAAFYAKELAFLSGTKTGVGGRELRGPFVSGGGGAVGSHLRVRYLDVLSCLVRYNLK 408          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9687.23728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KS39_9PHAE8.970e-10344.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ83_ECTSI1.480e-6441.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9687contigP-canaliculata_contig9687:9725..11335 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9687.23728.1mRNA_P-canaliculata_contig9687.23728.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9687 9725..11335 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9687.23728.1 ID=prot_P-canaliculata_contig9687.23728.1|Name=mRNA_P-canaliculata_contig9687.23728.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=537bp
MPDVDSPQITGILEQGSTTNGVVIGLHLSKRHRDEASPPPGKRGRAENTD
KSLTLQIPVPSAPLPTSFGNGSPQAPAPLCESPIANQASSTPTAGFAAAV
LGDDGVVKHTENSPTEPALPAAMPSVTPGGAGLGASKRKSRVPATAAPSV
GATGPIFHAAILRVLHRRGGITCPEAKEWSWRGGASTRFDHWPSSLHPAV
MDLLASVTASEERVALAGCDAHDSACRDDDGRITQLTPPLFPPPPSSARR
GAAWRAPVPRTPVRRASAIGPRITFPATPGSHPRAMAVDPGMTPLSALRR
PGSARRSEGSRVRFSTHDMSVVDTPDPARDGSEKGMVSAMDGLESILMAA
EEVQRLVARGRSNVSGVESAEERAGSRRYEGYFDRFGATASCDAEEPVVG
VGSPTEEDSALASLSYSGGGQQISDENSEGGHSIGQADQRGDGPQPGDES
SVLEDAAALVSVLDEMACSDSAPEEVTLAGGWGPEHSNAAAFYATELALL
CGVDPRAQASEPGTVRSHLRSRYLDVLSCLVRYNLKV
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