prot_P-canaliculata_contig9687.23727.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9687.23727.1
Unique Nameprot_P-canaliculata_contig9687.23727.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length731
Homology
BLAST of mRNA_P-canaliculata_contig9687.23727.1 vs. uniprot
Match: D8LQ84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ84_ECTSI)

HSP 1 Score: 519 bits (1336), Expect = 1.430e-170
Identity = 370/809 (45.74%), Postives = 462/809 (57.11%), Query Frame = 0
Query:    4 VQRVTRLLRTSRFVD-------DRIAQLEVDNAITDTSKSLLRLAE----AASAP--SDERKIVPPPDLLGAYRGYLEALATARPDRFALDCRSLAPHVAAVLLSSTALASPGSASLGASALVPEPAADEGGGVASPAQTEASKGGRPPTGGR----EERKYLELWTEMVGICLVPFCDDG------ELIGELDVSHDDDDDSEMEDDQH----------------KVAEGRAGAVMGSWRVLQRARWVP----------TEPQECPFNVQPGGEQEDLPLRLCLRLFLLCQAAAAGSRAASVSSSTAVLPILCAFTAARGCSP--------EIHEQVAKEAFSCVIAIARNSPESSAQAECIKASLVSLRECAQVTRLSTLEAWVPSVLSMLEGVPSRLKQLLARSKGQGRKAYTTARSFCREALAAAVACTRAVVGRAGASVLMANSRWFLVDFVVAMASPMLLADAVRALHLASEGTQGLGGRQEGATR-------------ALRNVLLPGAVERITKALKSLDRYSAHSAKEVLKAAALLAQVA-SREILPYRNRLGVALVECVSNEGRASA---GAEADEKLRLCLRAIRRLLSA-------------SSGDASSRDVETSSGAAQPFAETALDLTCGVVEQEWVREAGTRDGGGGSGDGSAAGEGGESIAAVVEAHTTLVALLRS-DLRVPGLAPDGDWPPTAKRLAKVAWAFAGRLKGAAGTAGADRPSPLADDDVMLLCQGAELLEALADRGGVFFQGSERLVSFFAGELSQVLATFRTSQDGDGATFLHPVVIEACAWVR 724
            VQ V + +++S  V        D  A   +D  I++TS+ +L   E    AA+AP  SD R++ PP  L    R Y+EALATA P RF+ DCRSLA  VA+ +L  T  A    +++G    V  P  +  G      + E +  G P   GR    EER  LELW EM+GICL+PFC  G         G  + +  DDD+S     +H                         V G  +   R+RWV            EP ECPF+V+PGG  ED+P+RL   +    QAAA+ SR ASVS                            E H  V +EAFSC++ ++   PESSAQAEC+KA+LVSL+ECAQ  RL  LE  VP+ LSMLEGVPSRLK LL RSK QG K Y+TARSFCREAL AAVAC R ++G  G  V+M + RWFL  FVV MASP+LL DAV AL  AS   +G+G   EG                ALR V+LPGAV R+ KAL ++DRYSA +AKEVLKA A LA+ A + EI P+RNRLG+ALVEC ++ GRAS    G E DEK+RLCLRAIRRL +A             ++GD  +   +    AAQ F E AL+ TCGVVE+EWV + G R    G  +G   G+G ESI  +VEAH TLVALLRS  + VPG+ PDG+WPP AKRLAK+AWA A R++ AAG    +    LADDDVMLLCQG E+LEAL +  G FF+G    + FF G+LS VL T R   D +    +HPVV +AC+WVR
Sbjct:   21 VQSVAKQIKSSSQVHLKGAAGTDEAATRTLDETISETSRRVLAWVECAAAAAAAPHSSDGRRVFPPVLLTSCCR-YMEALATAYPARFSADCRSLARPVASCVLVMTRTAKAHDSAIG----VAVPCRETKG------EGEENDDGFPSRSGRTITIEERNALELWVEMLGICLLPFCGSGGGSRTTSRSGLGEATSGDDDNSRDPSGEHGDDPFDSDXXXXXXXXXXXXXXGSRVSGDGKA--RSRWVAGWMRRAGITLAEPLECPFDVRPGGRDEDMPVRLATLISYHAQAAASASRPASVSXXXXXXXXXXXXXXXXXXXXXXXXXTPSESHALVVEEAFSCLLCLSETVPESSAQAECVKAALVSLKECAQSARLRCLEHRVPAALSMLEGVPSRLKLLLTRSKSQGAKVYSTARSFCREALTAAVACARKLIGLVGGLVVMDDPRWFLETFVVKMASPLLLGDAVGALRAASLAARGMGTAAEGGEERGPDGSTPSGMETALREVVLPGAVGRLIKALGNIDRYSAAAAKEVLKATAWLARAAGAEEIRPHRNRLGMALVECAASVGRASGAGGGVERDEKVRLCLRAIRRLGAAXXXXXXXXXXXXPAAGDVLAAASDREPAAAQQFTEAALEFTCGVVEREWVGKRGER----GEQEG---GDGQESIITLVEAHVTLVALLRSPSMCVPGIGPDGEWPPAAKRLAKLAWAVAYRVRKAAGAV--ESSMALADDDVMLLCQGLEVLEALEECSGEFFEGKRSKMRFFEGDLSPVLTTLRGCHDKNT---MHPVVYDACSWVR 804          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9687.23727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ84_ECTSI1.430e-17045.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9687contigP-canaliculata_contig9687:1499..6119 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9687.23727.1mRNA_P-canaliculata_contig9687.23727.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9687 1499..6119 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9687.23727.1 ID=prot_P-canaliculata_contig9687.23727.1|Name=mRNA_P-canaliculata_contig9687.23727.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=731bp
VHEVQRVTRLLRTSRFVDDRIAQLEVDNAITDTSKSLLRLAEAASAPSDE
RKIVPPPDLLGAYRGYLEALATARPDRFALDCRSLAPHVAAVLLSSTALA
SPGSASLGASALVPEPAADEGGGVASPAQTEASKGGRPPTGGREERKYLE
LWTEMVGICLVPFCDDGELIGELDVSHDDDDDSEMEDDQHKVAEGRAGAV
MGSWRVLQRARWVPTEPQECPFNVQPGGEQEDLPLRLCLRLFLLCQAAAA
GSRAASVSSSTAVLPILCAFTAARGCSPEIHEQVAKEAFSCVIAIARNSP
ESSAQAECIKASLVSLRECAQVTRLSTLEAWVPSVLSMLEGVPSRLKQLL
ARSKGQGRKAYTTARSFCREALAAAVACTRAVVGRAGASVLMANSRWFLV
DFVVAMASPMLLADAVRALHLASEGTQGLGGRQEGATRALRNVLLPGAVE
RITKALKSLDRYSAHSAKEVLKAAALLAQVASREILPYRNRLGVALVECV
SNEGRASAGAEADEKLRLCLRAIRRLLSASSGDASSRDVETSSGAAQPFA
ETALDLTCGVVEQEWVREAGTRDGGGGSGDGSAAGEGGESIAAVVEAHTT
LVALLRSDLRVPGLAPDGDWPPTAKRLAKVAWAFAGRLKGAAGTAGADRP
SPLADDDVMLLCQGAELLEALADRGGVFFQGSERLVSFFAGELSQVLATF
RTSQDGDGATFLHPVVIEACAWVRRSPSFH*
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