prot_P-canaliculata_contig96860.23726.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig96860.23726.1
Unique Nameprot_P-canaliculata_contig96860.23726.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length154
Homology
BLAST of mRNA_P-canaliculata_contig96860.23726.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 6.480e-30
Identity = 69/163 (42.33%), Postives = 98/163 (60.12%), Query Frame = 0
Query:    4 TGLTVVQQGIRVVGVSVGTEQFQHDFLQEAVDGEPAKLVRALVPMEDAQTSFQILRLSATSRLSHLLRTVTPSTIDQAAAKYDALVEWALAPIIAAHD------PTVGQNQI--------YLGHEALRQAHLPIREGGLGLTSSSSIRGAAYIGCHALVLARV 152
            TGL+V + G+ +VGV VGTE FQ  F+     G PA+L+R L  ++D Q S+Q+LRLS   RL HLLRT+ PS  + AA ++D L+ WA++ I+          PTV + +         +    A  Q HLPIREGGLG+TSS  IR +A++   ALV +++
Sbjct:  117 TGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFVAGQALVFSKI 279          
BLAST of mRNA_P-canaliculata_contig96860.23726.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 2.020e-29
Identity = 64/164 (39.02%), Postives = 97/164 (59.15%), Query Frame = 0
Query:    5 GLTVVQQGIRVVGVSVGTEQFQHDFLQEAVDGEPAKLVRALVPMEDAQTSFQILRLSATSRLSHLLRTVTPSTIDQAAAKYDALVEWALAPIIAAH---------------DPTVGQNQIYLGHEALRQAHLPIREGGLGLTSSSSIRGAAYIGCHALVLARVV 153
            GL+V + G+ VVG+  GTE+FQ +F+ +   G+PA+L+  L  ++D Q S+Q+LRLS   RL HLLRT+ PS  + AA  +D ++ WA++ I+                  DPT  +   +    A  Q HLP+REGGLG+TS+  IR +A++   ALV ++ V
Sbjct:   85 GLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSV 248          
BLAST of mRNA_P-canaliculata_contig96860.23726.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.990e-28
Identity = 65/164 (39.63%), Postives = 98/164 (59.76%), Query Frame = 0
Query:    5 GLTVVQQGIRVVGVSVGTEQFQHDFLQEAVDGEPAKLVRALVPMEDAQTSFQILRLSATSRLSHLLRTVTPSTIDQAAAKYDALVEWALAPIIAAH---------------DPTVGQNQIYLGHEALRQAHLPIREGGLGLTSSSSIRGAAYIGCHALVLARVV 153
            GL+V + G+ VVG+ VGTE+FQ +F+ +   G+PA+L+  L  ++D Q S+Q+LRLS   RL HLLRT+ PS  + AA  +D ++ WA++ I+                  DPT  +   +    A  Q HLP+REGGLG+TS+  IR +A++   ALV ++ V
Sbjct:  419 GLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSV 582          
BLAST of mRNA_P-canaliculata_contig96860.23726.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 2.040e-28
Identity = 65/164 (39.63%), Postives = 98/164 (59.76%), Query Frame = 0
Query:    5 GLTVVQQGIRVVGVSVGTEQFQHDFLQEAVDGEPAKLVRALVPMEDAQTSFQILRLSATSRLSHLLRTVTPSTIDQAAAKYDALVEWALAPIIAAH---------------DPTVGQNQIYLGHEALRQAHLPIREGGLGLTSSSSIRGAAYIGCHALVLARVV 153
            GL+V + G+ VVG+ VGTE+FQ +F+ +   G+PA+L+  L  ++D Q S+Q+LRLS   RL HLLRT+ PS  + AA  +D ++ WA++ I+                  DPT  +   +    A  Q HLP+REGGLG+TS+  IR +A++   ALV ++ V
Sbjct:  419 GLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSV 582          
BLAST of mRNA_P-canaliculata_contig96860.23726.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 2.060e-28
Identity = 65/164 (39.63%), Postives = 98/164 (59.76%), Query Frame = 0
Query:    5 GLTVVQQGIRVVGVSVGTEQFQHDFLQEAVDGEPAKLVRALVPMEDAQTSFQILRLSATSRLSHLLRTVTPSTIDQAAAKYDALVEWALAPIIAAH---------------DPTVGQNQIYLGHEALRQAHLPIREGGLGLTSSSSIRGAAYIGCHALVLARVV 153
            GL+V + G+ VVG+ VGTE+FQ +F+ +   G+PA+L+  L  ++D Q S+Q+LRLS   RL HLLRT+ PS  + AA  +D ++ WA++ I+                  DPT  +   +    A  Q HLP+REGGLG+TS+  IR +A++   ALV ++ V
Sbjct:  267 GLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSV 430          
BLAST of mRNA_P-canaliculata_contig96860.23726.1 vs. uniprot
Match: A0A6H5KFL6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL6_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 2.630e-28
Identity = 61/154 (39.61%), Postives = 91/154 (59.09%), Query Frame = 0
Query:   15 VVGVSVGTEQFQHDFLQEAVDGEPAKLVRALVPMEDAQTSFQILRLSATSRLSHLLRTVTPSTIDQAAAKYDALVEWALAPIIAAH---------------DPTVGQNQIYLGHEALRQAHLPIREGGLGLTSSSSIRGAAYIGCHALVLARVV 153
            VVG+ VGTE+FQ +F+ +   G+PA+L+  L  ++D Q S+Q+LRLS   RL HLLRT+ PS  + AA  +D ++ WA++ I+                  DPT  +   +    A  Q HLP+REGGLG+TS+  IR +A++   ALV ++ V
Sbjct:    3 VVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSV 156          
BLAST of mRNA_P-canaliculata_contig96860.23726.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 7.700e-28
Identity = 69/162 (42.59%), Postives = 97/162 (59.88%), Query Frame = 0
Query:    4 TGLTVVQQGIRVVGVSVGTEQFQHDFLQEAVDGEPAKLVRALVPMEDAQTSFQILRLSATSRLSHLLRTVTPSTIDQAAAKYDALVEWALAPIIAAHD------PTVGQNQI--------YLGHEALRQAHLPIREGGLGLTSSSSIRGAAYIGCHALVLAR 151
            TGL+V + G+ +VGV VGTE FQ  F+     G PA+L+R L  ++D Q S+Q+LRLS   RL HLLRT+ PS  + AA ++D L+ WA++ I+          PTV + +         +    A  Q HLPIREGGLG+TSS  IR +A++   ALV ++
Sbjct:  418 TGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFVAGQALVFSK 579          
BLAST of mRNA_P-canaliculata_contig96860.23726.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.530e-27
Identity = 69/164 (42.07%), Postives = 101/164 (61.59%), Query Frame = 0
Query:    4 TGLTVVQQGIRVVGVSVGTEQFQHDFLQEAVDGEPAKLVRALVPMEDAQTSFQILRLSATSRLSHLLRTVTPSTIDQAAAKYDALVEWALAPIIAAHD------PTVGQ-------NQI-YLGHEALRQAHLPIREGGLGLTSSSSIRGAAYIGCHALVLARVV 153
            TGL+V + G+ +VGV VGTE FQ  F+     G PA+L+  L  ++D QTS+Q+LR+S   RL HLLRT+ PS  + AA ++D+L+ WA++ I+          PTV +       +++ +    A  Q HLPIREGGLG+TSS  IR +A++   ALV ++ V
Sbjct:  266 TGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLGKMANTVGIPTVEEVPANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFVAGQALVFSKSV 429          
BLAST of mRNA_P-canaliculata_contig96860.23726.1 vs. uniprot
Match: A0A6H5KDI2_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI2_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.550e-27
Identity = 64/164 (39.02%), Postives = 97/164 (59.15%), Query Frame = 0
Query:    5 GLTVVQQGIRVVGVSVGTEQFQHDFLQEAVDGEPAKLVRALVPMEDAQTSFQILRLSATSRLSHLLRTVTPSTIDQAAAKYDALVEWALAPIIAAH---------------DPTVGQNQIYLGHEALRQAHLPIREGGLGLTSSSSIRGAAYIGCHALVLARVV 153
            GL+V + G+ VV + VGTE+FQ +F+ +   G+PA+L+  L  ++D Q S+Q+LRLS   RL HLLRT+ PS  + AA  +D ++ WA++ I+                  DPT  +   +    A  Q HLP+REGGLG+TS+  IR +A++   ALV ++ V
Sbjct:   85 GLSVAEGGMPVVAIPVGTEEFQRNFVPKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSV 248          
BLAST of mRNA_P-canaliculata_contig96860.23726.1 vs. uniprot
Match: A0A6H5KKJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ7_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 2.370e-27
Identity = 64/164 (39.02%), Postives = 97/164 (59.15%), Query Frame = 0
Query:    5 GLTVVQQGIRVVGVSVGTEQFQHDFLQEAVDGEPAKLVRALVPMEDAQTSFQILRLSATSRLSHLLRTVTPSTIDQAAAKYDALVEWALAPIIAAH---------------DPTVGQNQIYLGHEALRQAHLPIREGGLGLTSSSSIRGAAYIGCHALVLARVV 153
            GL+V + G+ VVG+ VGTE+FQ +F+ +   G+PA+L+  L  ++D Q S+Q+LRLS   RL  LLRT+ PS  + AA  +D ++ WA++ I+                  DPT  +   +    A  Q HLP+REGGLG+TS+  IR +A++   ALV ++ V
Sbjct:   85 GLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFQLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSV 248          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig96860.23726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5K541_9PHAE6.480e-3042.33Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLD7_9PHAE2.020e-2939.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCM0_9PHAE1.990e-2839.63Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE2.040e-2839.63Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K1H0_9PHAE2.060e-2839.63Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KFL6_9PHAE2.630e-2839.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGJ4_9PHAE7.700e-2842.59Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE1.530e-2742.07Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KDI2_9PHAE1.550e-2739.02Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5KKJ7_9PHAE2.370e-2739.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig96860contigP-canaliculata_contig96860:271..777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig96860.23726.1mRNA_P-canaliculata_contig96860.23726.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig96860 271..777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig96860.23726.1 ID=prot_P-canaliculata_contig96860.23726.1|Name=mRNA_P-canaliculata_contig96860.23726.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=154bp
MDTTGLTVVQQGIRVVGVSVGTEQFQHDFLQEAVDGEPAKLVRALVPMED
AQTSFQILRLSATSRLSHLLRTVTPSTIDQAAAKYDALVEWALAPIIAAH
DPTVGQNQIYLGHEALRQAHLPIREGGLGLTSSSSIRGAAYIGCHALVLA
RVVA
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