prot_P-canaliculata_contig96745.23709.1 (polypeptide) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig96745.23709.1 vs. uniprot
Match: UPI001AD8DC38 (uncharacterized protein LOC121052952 isoform X1 n=1 Tax=Rosa chinensis TaxID=74649 RepID=UPI001AD8DC38) HSP 1 Score: 58.9 bits (141), Expect = 3.360e-8 Identity = 31/85 (36.47%), Postives = 51/85 (60.00%), Query Frame = 0
Query: 1 MGDDLWLLETGATGHFTYDSRLLENYAER--SRVLRCAGGNTFPIVGTGTFRLSLRSGKGVVRVTLMNVAHVPGLSHHLLSLRRI 83
+G+D W++++GA+ H TYD + + S+V A G FP++GTG+ RL+ + L NV +VP LSHHL+S+ ++
Sbjct: 348 VGEDTWIIDSGASDHMTYDKSYFTHLSPPPVSKVTN-ANGEAFPVLGTGSVRLT-------PTLELHNVLYVPALSHHLISVPQL 424
BLAST of mRNA_P-canaliculata_contig96745.23709.1 vs. uniprot
Match: A0A2P6RQJ8_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RQJ8_ROSCH) HSP 1 Score: 54.7 bits (130), Expect = 9.720e-7 Identity = 31/84 (36.90%), Postives = 51/84 (60.71%), Query Frame = 0
Query: 2 GDDLWLLETGATGHFTYDSR--LLENYAERSRVLRCAGGNTFPIVGTGTFRLSLRSGKGVVRVTLMNVAHVPGLSHHLLSLRRI 83
G + W++++GA+ H TYD L N S V+ A G++FP++G G+ RL+ +TL +V +VP LSHHL+S+ ++
Sbjct: 103 GGNTWIIDSGASDHMTYDRSFFLFLNPPSISSVVN-ANGDSFPVLGIGSIRLT-------PSLTLHDVLYVPDLSHHLISVPQL 178
BLAST of mRNA_P-canaliculata_contig96745.23709.1 vs. uniprot
Match: A0A2P6RMC5_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RMC5_ROSCH) HSP 1 Score: 54.3 bits (129), Expect = 1.510e-6 Identity = 31/84 (36.90%), Postives = 51/84 (60.71%), Query Frame = 0
Query: 2 GDDLWLLETGATGHFTYDSR--LLENYAERSRVLRCAGGNTFPIVGTGTFRLSLRSGKGVVRVTLMNVAHVPGLSHHLLSLRRI 83
G + W++++GA+ H TYD L N S V+ A G++FP++G G+ RL+ +TL +V +VP LSHHL+S+ ++
Sbjct: 100 GGNTWIIDSGASDHMTYDRSFFLFLNPPSISSVVN-ANGDSFPVLGIGSVRLT-------PSLTLHDVLYVPDLSHHLISVPQL 175
BLAST of mRNA_P-canaliculata_contig96745.23709.1 vs. uniprot
Match: A0A7J0FQP2_9ERIC (CCHC-type domain-containing protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0FQP2_9ERIC) HSP 1 Score: 50.4 bits (119), Expect = 3.250e-5 Identity = 29/87 (33.33%), Postives = 50/87 (57.47%), Query Frame = 0
Query: 3 DDLWLLETGATGHFTYDSRLLENYAERSRVLRCAGGNTFP--IVGTGTFRLSLRSGKGVVRVTLMNVAHVPGLSHHLLSLRRIADAG 87
DD+W++++GA H TY +L NY + + G+ P I+G G ++SL +G + L +V HVP L +L+S+ ++A +G
Sbjct: 256 DDVWIVDSGALFHATYQKEILHNYV-KGDFGKVYLGDDEPCSIIGKGEVQISLTNG---TTLRLKDVRHVPNLKRNLISVGQLATSG 338
BLAST of mRNA_P-canaliculata_contig96745.23709.1 vs. uniprot
Match: A0A2Z6N5N8_TRISU (Integrase catalytic domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6N5N8_TRISU) HSP 1 Score: 50.4 bits (119), Expect = 3.460e-5 Identity = 28/85 (32.94%), Postives = 48/85 (56.47%), Query Frame = 0
Query: 3 DDLWLLETGATGHFTYDSRLLENYAERS-RVLRCAGGNTFPIVGTGTFRLSLRSGKGVVRVTLMNVAHVPGLSHHLLSLRRIADA 86
D LW++++GAT H T+DS+ + + S + + A G+ IVG G+ L+ + L +V VP L H+LLS+ +I ++
Sbjct: 333 DSLWIIDSGATDHMTFDSKQISHLRPSSQKSISTANGSEASIVGEGSLSLTKN-------LNLDSVLVVPSLDHNLLSISQITES 410 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig96745.23709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-canaliculata_contig96745.23709.1 ID=prot_P-canaliculata_contig96745.23709.1|Name=mRNA_P-canaliculata_contig96745.23709.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=87bpback to top |