prot_P-canaliculata_contig9674.23708.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9674.23708.1
Unique Nameprot_P-canaliculata_contig9674.23708.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length242
Homology
BLAST of mRNA_P-canaliculata_contig9674.23708.1 vs. uniprot
Match: D8LHL4_ECTSI (DUF3342 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHL4_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 4.170e-17
Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 0
Query:  194 DVVTIHVCDEGRGITRDFSCDRRLLLTEMEYFHSYLVAASSPYDEIDIL 242
            D+V IHVCDEGRGITRDF C+RRLLL EM+YF SYLV ASSPYDEIDIL
Sbjct:  265 DIVKIHVCDEGRGITRDFPCERRLLLREMKYFQSYLVGASSPYDEIDIL 313          
BLAST of mRNA_P-canaliculata_contig9674.23708.1 vs. uniprot
Match: A0A835YQX4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX4_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 6.800e-13
Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 0
Query:  187 LASKCRA---DVVTIHVCDEGRGITRDFSCDRRLLLTEMEYFHSYLVAASSPYDEIDIL 242
            L + CR    D VTIHVCD+GR +TRDF C+R LLL EM+YF  YL A++ P+DE+DIL
Sbjct:   96 LPAICRPAAEDAVTIHVCDDGRSVTRDFQCNRALLLQEMQYFQGYLSASAGPFDEVDIL 154          
BLAST of mRNA_P-canaliculata_contig9674.23708.1 vs. uniprot
Match: A0A7S3Z7E0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z7E0_9EUKA)

HSP 1 Score: 62.0 bits (149), Expect = 1.970e-7
Identity = 26/48 (54.17%), Postives = 37/48 (77.08%), Query Frame = 0
Query:  194 DVVTIHVCDEGRGITRDFSCDRRLLLTEMEYFHSYLVAASSPYDEIDI 241
            D++ IHVCDE RG+ RDF C R++L + M+YF SYL + S+ +D+IDI
Sbjct:  178 DMIVIHVCDEARGVNRDFHCSRKVLTSGMKYFRSYL-SESASFDDIDI 224          
BLAST of mRNA_P-canaliculata_contig9674.23708.1 vs. uniprot
Match: S4RH33_PETMA (DUF3342 domain-containing protein n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RH33_PETMA)

HSP 1 Score: 61.6 bits (148), Expect = 2.480e-7
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 0
Query:  188 ASKCRADVVTIHVCDEGRGITRDFSCDRRLLLTEMEYFHSYLVAASSPYDEIDI 241
            +++ +   + IHVCDE RG+ RDFSC R+LL+ EM YF  YL   +  ++E+DI
Sbjct:  130 STESQGPTMVIHVCDEARGVKRDFSCPRQLLVQEMRYFSEYLSMEAQRWEEVDI 183          
BLAST of mRNA_P-canaliculata_contig9674.23708.1 vs. uniprot
Match: UPI001403F5C7 (uncharacterized protein KIAA1841 homolog isoform X1 n=3 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001403F5C7)

HSP 1 Score: 61.6 bits (148), Expect = 2.680e-7
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 0
Query:  188 ASKCRADVVTIHVCDEGRGITRDFSCDRRLLLTEMEYFHSYLVAASSPYDEIDI 241
            +++ +   + IHVCDE RG+ RDFSC R+LL+ EM YF  YL   +  ++E+DI
Sbjct:  165 STESQGPTMVIHVCDEARGVKRDFSCPRQLLVQEMRYFSEYLSMEAQRWEEVDI 218          
BLAST of mRNA_P-canaliculata_contig9674.23708.1 vs. uniprot
Match: A0A7S3ZMG3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMG3_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.840e-6
Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 0
Query:  194 DVVTIHVCDEGRGITRDFSCDRRLLLTEMEYFHSYLVAASSPYDEIDI 241
            D++ IHVCDE R ++RDF+CDR +LL EM YF SYL       ++IDI
Sbjct:  119 DLIVIHVCDEARKVSRDFACDRVVLLREMRYFRSYL-GGGDACEDIDI 165          
BLAST of mRNA_P-canaliculata_contig9674.23708.1 vs. uniprot
Match: A0A7S2SHR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHR3_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 4.000e-6
Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 0
Query:  194 DVVTIHVCDEGRGITRDFSCDRRLLLTEMEYFHSYLVAAS---SPYDEIDI 241
            D + IHVCDE +G+ RDF C R  LL+EM+YF SYL       S  D+IDI
Sbjct:  165 DTIVIHVCDEAKGVNRDFQCKRAKLLSEMKYFSSYLQLVGDDPSKEDDIDI 215          
BLAST of mRNA_P-canaliculata_contig9674.23708.1 vs. uniprot
Match: L1J2C4_GUITC (DUF3342 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J2C4_GUITC)

HSP 1 Score: 57.8 bits (138), Expect = 5.010e-6
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0
Query:  194 DVVTIHVCDEGRGITRDFSCDRRLLLTEMEYFHSYLVAASSPYDEIDI 241
            +++ IHVCDE RGI +DF+C + +LL+EM YF SYL   S   D+IDI
Sbjct:  173 ELIVIHVCDENRGINKDFTCRKDVLLSEMAYFQSYL-NGSEASDDIDI 219          
BLAST of mRNA_P-canaliculata_contig9674.23708.1 vs. uniprot
Match: A0A7S4HC00_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4HC00_GUITH)

HSP 1 Score: 57.8 bits (138), Expect = 5.220e-6
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0
Query:  194 DVVTIHVCDEGRGITRDFSCDRRLLLTEMEYFHSYLVAASSPYDEIDI 241
            +++ IHVCDE RGI +DF+C + +LL+EM YF SYL   S   D+IDI
Sbjct:  206 ELIVIHVCDENRGINKDFTCRKDVLLSEMAYFQSYL-NGSEASDDIDI 252          
BLAST of mRNA_P-canaliculata_contig9674.23708.1 vs. uniprot
Match: A0A7S0HLC3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HLC3_9CRYP)

HSP 1 Score: 57.4 bits (137), Expect = 7.020e-6
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0
Query:  194 DVVTIHVCDEGRGITRDFSCDRRLLLTEMEYFHSYLVAASSPYDEIDI 241
            +++ IHVCDE RG+ +DF+C + +LL+EM YF SYL   S   D+IDI
Sbjct:  208 ELIVIHVCDENRGVNKDFTCRKDVLLSEMAYFQSYL-NGSEACDDIDI 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9674.23708.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LHL4_ECTSI4.170e-1783.67DUF3342 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YQX4_9STRA6.800e-1359.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Z7E0_9EUKA1.970e-754.17Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
S4RH33_PETMA2.480e-746.30DUF3342 domain-containing protein n=1 Tax=Petromyz... [more]
UPI001403F5C72.680e-746.30uncharacterized protein KIAA1841 homolog isoform X... [more]
A0A7S3ZMG3_9STRA2.840e-654.17Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2SHR3_9STRA4.000e-652.94Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
L1J2C4_GUITC5.010e-654.17DUF3342 domain-containing protein n=1 Tax=Guillard... [more]
A0A7S4HC00_GUITH5.220e-654.17Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S0HLC3_9CRYP7.020e-652.08Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021777Domain of unknown function DUF3342PFAMPF11822DUF3342coord: 196..240
e-value: 3.4E-7
score: 30.4
NoneNo IPR availablePANTHERPTHR20946UNCHARACTERIZEDcoord: 193..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9674contigP-canaliculata_contig9674:7470..11616 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9674.23708.1mRNA_P-canaliculata_contig9674.23708.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9674 7470..11616 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9674.23708.1 ID=prot_P-canaliculata_contig9674.23708.1|Name=mRNA_P-canaliculata_contig9674.23708.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=242bp
EHQQYRVIVLKEDMSRIQTMGFASKGLSHGNGPNYVTIGGNHTTTSTGGR
IPTTRYRPLNGRGNNKSNGVGLQRIESGAGAGGSSSGSGSSMATGSSVYE
RHDVTGGGASGSGTGSPASTPVPSVRGGNGGNGGSVGGGDGRGGHMRPLT
ARKRPGDQSTKFGPGSRSGSEAEGGGGSNAGRGGRGLASKCRADVVTIHV
CDEGRGITRDFSCDRRLLLTEMEYFHSYLVAASSPYDEIDIL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021777DUF3342