prot_P-canaliculata_contig96720.23706.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig96720.23706.1
Unique Nameprot_P-canaliculata_contig96720.23706.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length160
Homology
BLAST of mRNA_P-canaliculata_contig96720.23706.1 vs. uniprot
Match: A0A6P1AC18_9CYAN (Filamentous hemagglutinin N-terminal domain-containing protein n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1AC18_9CYAN)

HSP 1 Score: 67.8 bits (164), Expect = 3.330e-10
Identity = 65/167 (38.92%), Postives = 92/167 (55.09%), Query Frame = 0
Query:    1 ELLQLDNAAVISVNGGIIGLPDNIILRGRDFALNQESTISATTNLGGWGNISLQ-GERLFLGDRSSIATIAIEEATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---AKGIF-------LSANSEIIASSKFGVDGLIQIDTLTVDPNSGLVLFPTEPID 156
            +LLQ+++ A I+VN   +G   N+ ++  +  LN+++T+SA+T  G  GNI L   + LFL   S I+     EA G XXXXXXXXXXXX                        A+ +F       L+  S+I ASS+FG+DG+++IDT  +DPN GLV  P E ID
Sbjct:  843 QLLQVESGAAIAVNNRGLGQAGNLEVQASEIFLNRDATLSASTASGEGGNIQLDLADLLFLQGNSVISA----EAGGTXXXXXXXXXXXXIVAIANSDIIANAFQGRGGNIQINAQSVFGTQFRPQLTPTSDINASSEFGIDGVVEIDTPDLDPNQGLVSLPEEVID 1005          
BLAST of mRNA_P-canaliculata_contig96720.23706.1 vs. uniprot
Match: A0A846E3G4_9CYAN (S-layer family protein n=1 Tax=Desertifilum sp. SIO1I2 TaxID=2607799 RepID=A0A846E3G4_9CYAN)

HSP 1 Score: 64.7 bits (156), Expect = 3.450e-9
Identity = 82/166 (49.40%), Postives = 109/166 (65.66%), Query Frame = 0
Query:    1 ELLQLDNAAVISVNGGIIGLPDNIILRGRDFALNQESTISATTNLGGWGNISLQG-ERLFLGDRSSIATIAIEEATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGIFLSAN--------SEIIASSKFGVDGLIQIDTLTVDPNSGLVLFPTEPIDP 157
            + +++ + AVISV+    G   N+ L  R+  L+ ++++ A  N G  GNI ++G + + L   S+I T A E++TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     L           S+I ASS+FG+ G +QI+TL VDP+SGLV  P+   DP
Sbjct:  230 DTVRVRDGAVISVSNSATGNAGNLTLNAREVFLDNQASLQAEVNGGSQGNIRIRGADAVVLRRGSNITTNASEDSTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLGLQNRDRLTDESDITASSQFGLSGTVQINTLDVDPSSGLVALPSNVSDP 395          
BLAST of mRNA_P-canaliculata_contig96720.23706.1 vs. uniprot
Match: A0A1E5QP20_9CYAN (Filamentous hemagglutinin n=1 Tax=Desertifilum sp. IPPAS B-1220 TaxID=1781255 RepID=A0A1E5QP20_9CYAN)

HSP 1 Score: 64.7 bits (156), Expect = 3.820e-9
Identity = 82/166 (49.40%), Postives = 109/166 (65.66%), Query Frame = 0
Query:    1 ELLQLDNAAVISVNGGIIGLPDNIILRGRDFALNQESTISATTNLGGWGNISLQG-ERLFLGDRSSIATIAIEEATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGIFLSAN--------SEIIASSKFGVDGLIQIDTLTVDPNSGLVLFPTEPIDP 157
            + +++ + AVISV+    G   N+ L  R+  L+ ++++ A  N G  GNI ++G + + L   S+I T A E++TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     L           S+I ASS+FG+ G +QI+TL VDP+SGLV  P+   DP
Sbjct:  638 DTVRVRDGAVISVSNSATGNAGNLTLNAREVFLDNQASLQAEVNGGSQGNIRIRGADAVVLRRGSNITTNASEDSTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGLQNRDRLTDESDITASSQFGLSGTVQINTLDVDPSSGLVALPSNVNDP 803          
BLAST of mRNA_P-canaliculata_contig96720.23706.1 vs. uniprot
Match: A0A1E5QP24_9CYAN (Filamentous hemagglutinin n=2 Tax=Desertifilum TaxID=1185872 RepID=A0A1E5QP24_9CYAN)

HSP 1 Score: 63.5 bits (153), Expect = 9.590e-9
Identity = 82/166 (49.40%), Postives = 108/166 (65.06%), Query Frame = 0
Query:    1 ELLQLDNAAVISVNGGIIGLPDNIILRGRDFALNQESTISATTNLGGWGNISLQG-ERLFLGDRSSIATIAIEEATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGIFLSAN--------SEIIASSKFGVDGLIQIDTLTVDPNSGLVLFPTEPIDP 157
            + +++ + AVISV+    G   N+ L  R+  L+ ++++ A  N G  GNI ++G + + L   S I T A E++TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     L           S+I ASS+FG+ G +QI+TL VDP+SGLV  P+   DP
Sbjct:  628 DTVRVRDGAVISVSNSATGNAGNLTLNAREVFLDNQASLQAEVNGGSQGNIRIRGADAVVLRRGSQITTNAGEDSTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGLQNRDRLTDESDITASSQFGLSGTVQINTLDVDPSSGLVALPSNVNDP 793          
BLAST of mRNA_P-canaliculata_contig96720.23706.1 vs. uniprot
Match: UPI0016829064 (S-layer family protein n=3 Tax=Nostocales TaxID=1161 RepID=UPI0016829064)

HSP 1 Score: 62.4 bits (150), Expect = 2.410e-8
Identity = 60/167 (35.93%), Postives = 82/167 (49.10%), Query Frame = 0
Query:    1 ELLQLDNAAVISVNGGIIGLPDNIILRGRDFALNQESTISATTNLGGWGNISLQG-ERLFLGDRSSIATIAIEEATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAK-GIF-------LSANSEIIASSKFGVDGLIQIDTLTVDPNSGLVLFPTEPIDPN 158
            + L + + A ISV+    G   N+ +  R+  L+ + ++ A  N G  GNI LQ  + + L   S I T A   +TG                         XXXXXXXXX    IF       L+ NS+I ASS+FGV G++Q+DT+ VDPNSGLV  P    DP+
Sbjct:  640 DSLSVRDGAEISVSNSGTGDAGNLNINARNIFLDNQGSLRAEVNGGSRGNIRLQSSDVVLLRHGSKIITNAYGTSTGGNIEINAGSIVAVPTENSDISANAVXXXXXXXXXTTHSIFGLQFQDQLTPNSDITASSQFGVSGIVQVDTIGVDPNSGLVELPANVTDPS 806          
BLAST of mRNA_P-canaliculata_contig96720.23706.1 vs. uniprot
Match: A0A1E5QPB5_9CYAN (Filamentous hemagglutinin n=2 Tax=Desertifilum TaxID=1185872 RepID=A0A1E5QPB5_9CYAN)

HSP 1 Score: 61.6 bits (148), Expect = 4.460e-8
Identity = 82/166 (49.40%), Postives = 108/166 (65.06%), Query Frame = 0
Query:    1 ELLQLDNAAVISVNGGIIGLPDNIILRGRDFALNQESTISATTNLGGWGNISLQG-ERLFLGDRSSIATIAIEEATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGIFLSAN--------SEIIASSKFGVDGLIQIDTLTVDPNSGLVLFPTEPIDP 157
            + +++ + AVISV+    G   N+ L  R+  L+ ++++ A  N G  GNI ++G + + L   S I T A E++TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     L           S+I ASS+FG+ G +QI+TL VDP+SGLV  P+   DP
Sbjct:  626 DTVRVRDGAVISVSNLATGDAGNLTLNAREVFLDNQASLQAEVNGGSRGNIRIRGADAVVLRRGSQITTNAGEDSTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGLQNRDRLTDESDITASSQFGLSGTVQINTLDVDPSSGLVALPSNVSDP 791          
BLAST of mRNA_P-canaliculata_contig96720.23706.1 vs. uniprot
Match: A0A251W8C8_9CYAN (Filamentous hemagglutinin n=1 Tax=Alkalinema sp. CACIAM 70d TaxID=1934309 RepID=A0A251W8C8_9CYAN)

HSP 1 Score: 60.8 bits (146), Expect = 8.220e-8
Identity = 46/163 (28.22%), Postives = 69/163 (42.33%), Query Frame = 0
Query:    3 LQLDNAAVISVNGGIIGLPDNIILRGRDFALNQESTISATTNLGGWGNISLQGERLFLGDRSSIATIAIEEATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGIF-------LSANSEIIASSKFGVDGLIQIDTLTVDPNSGLVLFPTEPIDPN 158
            LQL N   I V+G  +G   NI ++  +  L+Q + + A    G  GNI+L  + L L   S I   A   A G                                   +GIF       L+  ++I ASS+FG++G +Q++T+  DPN+GL   P    DP+
Sbjct:  613 LQLSNQGEIVVSGQKLGDAGNIFIQANNVRLDQAAKLRAEATAGSQGNINLTAKTLLLRHGSVITANAAGTANGGNIILNAPIIVGLENSDIIANATKGRGGNINIT-TQGIFGLKYRDRLTPENDITASSEFGINGTVQVNTIGTDPNAGLTELPVNVADPS 774          
BLAST of mRNA_P-canaliculata_contig96720.23706.1 vs. uniprot
Match: UPI001685C5E5 (S-layer family protein n=1 Tax=Tolypothrix sp. FACHB-123 TaxID=2692868 RepID=UPI001685C5E5)

HSP 1 Score: 60.8 bits (146), Expect = 8.470e-8
Identity = 62/158 (39.24%), Postives = 88/158 (55.70%), Query Frame = 0
Query:    1 ELLQLDNAAVISVNGGIIGLPDNIILRGRDFALNQESTISATTNLGGWGNISLQGERLFLGDRSSIATIAIEEATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGIFLSANSEIIASSKFGVDGLIQIDTLTVDPNSGLVLFPTEPIDPN 158
             LL++ N A IS N   +G   NI +  +    ++ + ++ +T  GG GN++   + LFL + S I+T  ++    XXXXXXXXXXX              XXXXXXXXX +GIFLS +S I ASSKFGVDG++ I+ +    N      P   +DP+
Sbjct:  905 NLLKVTNQARISTNSAGLGQAGNITINAQQIQSDRGNIVATSTQTGG-GNLNFTTDLLFLNNHSLISTSVLDSNGXXXXXXXXXXXXVAHNRSDIRANAVFXXXXXXXXXXQGIFLSPDSHIDASSKFGVDGIVTINNVETSKNLANTELPANILDPS 1061          
BLAST of mRNA_P-canaliculata_contig96720.23706.1 vs. uniprot
Match: UPI001F23ACB9 (S-layer family protein n=1 Tax=Nostoc sp. CMAA1605 TaxID=2055159 RepID=UPI001F23ACB9)

HSP 1 Score: 60.5 bits (145), Expect = 1.110e-7
Identity = 59/157 (37.58%), Postives = 79/157 (50.32%), Query Frame = 0
Query:    3 LQLDNAAVISVNGGIIGLPDNIILRGRDFALNQESTISATTNLGGWGNISLQ-GERLFLGDRSSIATIAIEEATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAK------GIFLSANSEIIASSKFGVDGLIQIDTLTVDPNSGLVLFPT 152
            L L N   +SV     G   N+ +      L  ++ I A T  G  G+ISLQ  + L + DRS I T A     G                     XXXXXXXXXXXXX        G +L++ + I ASS+FGV+G +Q++T++V+PNSGLV  PT
Sbjct:  550 LTLTNGGTVSVTSQGTGNAGNLQIIADQIQLKNQALIQAQTESGNGGDISLQVSDSLLIRDRSKITTTAGVTGNGGNIKINSPTIVGLEDSDITANXXXXXXXXXXXXXXXXXXXXYGSYLTSENSITASSEFGVNGTVQVNTVSVEPNSGLVALPT 706          
BLAST of mRNA_P-canaliculata_contig96720.23706.1 vs. uniprot
Match: UPI00187EE5C5 (filamentous hemagglutinin N-terminal domain-containing protein n=1 Tax=unclassified Nodularia TaxID=2656917 RepID=UPI00187EE5C5)

HSP 1 Score: 58.5 bits (140), Expect = 5.100e-7
Identity = 59/166 (35.54%), Postives = 79/166 (47.59%), Query Frame = 0
Query:    1 ELLQLDNAAVISVNGGIIGLPDNIILRGRDFALNQESTISATTNLGGWGNISLQGERL-FLGDRSSIATIAIEEATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGIF-------LSANSEIIASSKFGVDGLIQIDTLTVDPNSGLVLFPTEPIDPN 158
            +L  LD A +   N G  G   N+ +      L    TISA T  G  GN+ L  E+L F+ DRS I+  A + A  XXXXXXXX                           +G+F       L+  ++I ASS+FG+ G +QI+T+ VDPNSGLV  P    DP+
Sbjct:  515 QLRVLDRADIGVKNEGT-GNAGNLEVDTDSIVLTNRGTISAATQSGNGGNLLLNAEQLLFMRDRSQISVEA-QLAXXXXXXXXXXPVIVGLENSDIIGNAVRGSGGNIQITTQGLFGLQFREQLTPENDITASSQFGISGTVQINTVGVDPNSGLVELPANVSDPS 678          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig96720.23706.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P1AC18_9CYAN3.330e-1038.92Filamentous hemagglutinin N-terminal domain-contai... [more]
A0A846E3G4_9CYAN3.450e-949.40S-layer family protein n=1 Tax=Desertifilum sp. SI... [more]
A0A1E5QP20_9CYAN3.820e-949.40Filamentous hemagglutinin n=1 Tax=Desertifilum sp.... [more]
A0A1E5QP24_9CYAN9.590e-949.40Filamentous hemagglutinin n=2 Tax=Desertifilum Tax... [more]
UPI00168290642.410e-835.93S-layer family protein n=3 Tax=Nostocales TaxID=11... [more]
A0A1E5QPB5_9CYAN4.460e-849.40Filamentous hemagglutinin n=2 Tax=Desertifilum Tax... [more]
A0A251W8C8_9CYAN8.220e-828.22Filamentous hemagglutinin n=1 Tax=Alkalinema sp. C... [more]
UPI001685C5E58.470e-839.24S-layer family protein n=1 Tax=Tolypothrix sp. FAC... [more]
UPI001F23ACB91.110e-737.58S-layer family protein n=1 Tax=Nostoc sp. CMAA1605... [more]
UPI00187EE5C55.100e-735.54filamentous hemagglutinin N-terminal domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 3..148
e-value: 2.3E-10
score: 42.4
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 13..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig96720contigP-canaliculata_contig96720:394..873 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig96720.23706.1mRNA_P-canaliculata_contig96720.23706.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig96720 146..873 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig96720.23706.1 ID=prot_P-canaliculata_contig96720.23706.1|Name=mRNA_P-canaliculata_contig96720.23706.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=160bp
ELLQLDNAAVISVNGGIIGLPDNIILRGRDFALNQESTISATTNLGGWGN
ISLQGERLFLGDRSSIATIAIEEATGGNILIELESNLLALEDSKITASAE
QRQGGNIQISAKGIFLSANSEIIASSKFGVDGLIQIDTLTVDPNSGLVLF
PTEPIDPNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence