prot_P-canaliculata_contig9672.23705.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9672.23705.1
Unique Nameprot_P-canaliculata_contig9672.23705.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length458
Homology
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BLAST of mRNA_P-canaliculata_contig9672.23705.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 5.580e-5
Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 0 
Query:    9 CRTEGCAKQPSFGVAGTKTREYCAQHAPDGMVSTNN 44
            C  E C K+P++GVAG+K RE+C+QHA DGMV+ NN
Sbjct:   64 CGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNN 99
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9672.23705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JT00_9PHAE5.580e-561.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9672contigP-canaliculata_contig9672:2078..3451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9672.23705.1mRNA_P-canaliculata_contig9672.23705.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9672 2038..4331 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9672.23705.1 ID=prot_P-canaliculata_contig9672.23705.1|Name=mRNA_P-canaliculata_contig9672.23705.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=458bp
MVRVNYRTCRTEGCAKQPSFGVAGTKTREYCAQHAPDGMVSTNNIMCKIE
GCGKTSSFGVAGTKTREYCAQHTKPGMVNVGSKKCRTKDCGKVSSFGVAG
TKIREYCAQHALDGMVNICNIMCRIEGCGTMPSFGVAGTKTREYCAQHAK
DGMVKVNYRTCRTKGCGKQPSFGVAGTKTREYCAQHARDRMVSINNSMCK
IEGCGKKASFGVAGTTTQEYCPRHAKNGMVDVGNRNCRTESCNVQPSFGV
AGTTTREYCAQHAKEGMVDVCSRKCRTKGCGKVPSFGVAGTKMREYCAQH
APDGMVNICIEMCRNEGGGNRSFGVENSPRYVDNEVVKANSDEIVAGVYT
RPICGVEGCRRREIDPHHYEEEAIGGASTQVGKRKTDYVSPVQPSPPSGC
RIGSYKRLRQGDIVSTASTRGGAIGSAAEAGTLPGIDEPKLPAKRYSSVK
MEVQLSG*
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