prot_P-canaliculata_contig96592.23697.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig96592.23697.1
Unique Nameprot_P-canaliculata_contig96592.23697.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length89
Homology
BLAST of mRNA_P-canaliculata_contig96592.23697.1 vs. uniprot
Match: A0A543EU98_9MICO (Uncharacterized protein n=1 Tax=Microbacterium kyungheense TaxID=1263636 RepID=A0A543EU98_9MICO)

HSP 1 Score: 64.3 bits (155), Expect = 4.620e-10
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0
Query:    2 SNVNKALQNWRSALSAEEAIDQAVLNELQDHLEAELARLPADILDENERVLIAARRVGAPDVLGRQFAADRAPLIWARRLY 82
            S   + +  WR  +S  EAID   ++EL+DHL  E+ARL A  LD +E  L+A +R+GA D L R+FA + +  +W + ++
Sbjct:   11 SGTEQQISAWRGYVSRREAIDGRDVDELEDHLRGEIARLAASGLDPDEAFLVAVKRLGALDDLSREFAREHSERLWKQLMF 91          
BLAST of mRNA_P-canaliculata_contig96592.23697.1 vs. uniprot
Match: UPI00135B1740 (permease prefix domain 1-containing protein n=1 Tax=Puerhibacterium puerhi TaxID=2692623 RepID=UPI00135B1740)

HSP 1 Score: 54.3 bits (129), Expect = 1.540e-6
Identity = 26/74 (35.14%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    4 VNKALQNWRSALSAEEAIDQAVLNELQDHLEAELARLPADILDENERVLIAARRVGAPDVLGRQFAADRAPLIW 77
            V + +  WR  +    A+  A ++EL+DHL A++A L A  LD++E  L+A +R+G  D + R+FA + +  +W
Sbjct:    5 VEEQIARWREYVHRRRAVSTADVDELEDHLRAQVADLGAAGLDDDEAFLVAIKRMGDLDAVSREFAVEHSERMW 78          
BLAST of mRNA_P-canaliculata_contig96592.23697.1 vs. uniprot
Match: A0A1B9NCW1_9MICO (Uncharacterized protein n=1 Tax=Microbacterium sediminis TaxID=904291 RepID=A0A1B9NCW1_9MICO)

HSP 1 Score: 52.8 bits (125), Expect = 5.390e-6
Identity = 27/74 (36.49%), Postives = 42/74 (56.76%), Query Frame = 0
Query:    4 VNKALQNWRSALSAEEAIDQAVLNELQDHLEAELARLPADILDENERVLIAARRVGAPDVLGRQFAADRAPLIW 77
            V   +  WR  L   +AI  A L+EL+DHL A++  L A  L ++E  L+A +R+G  D + R+FA +    +W
Sbjct:    5 VEAQVAQWRGYLQRHQAIAAADLDELEDHLRAQIDDLAAAGLADDEAFLVAIKRMGGSDAISREFAREHTERMW 78          
BLAST of mRNA_P-canaliculata_contig96592.23697.1 vs. uniprot
Match: UPI00166C8674 (permease prefix domain 1-containing protein n=1 Tax=Isoptericola cucumis TaxID=1776856 RepID=UPI00166C8674)

HSP 1 Score: 52.0 bits (123), Expect = 1.010e-5
Identity = 24/70 (34.29%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    8 LQNWRSALSAEEAIDQAVLNELQDHLEAELARLPADILDENERVLIAARRVGAPDVLGRQFAADRAPLIW 77
            +  WR+ +   +AI  A + E++DHL A++  L    LDE+E  L+A +R+G  D + R+FA + +  +W
Sbjct:   10 IDQWRAYVRRRQAISAADVEEMEDHLRAQVDDLAVTGLDEDEAFLVAVKRMGNLDAVSREFAREHSDRLW 79          
BLAST of mRNA_P-canaliculata_contig96592.23697.1 vs. uniprot
Match: UPI001E463604 (permease prefix domain 1-containing protein n=1 Tax=Glycomyces sp. A-F 0318 TaxID=2881355 RepID=UPI001E463604)

HSP 1 Score: 50.4 bits (119), Expect = 3.510e-5
Identity = 24/70 (34.29%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    8 LQNWRSALSAEEAIDQAVLNELQDHLEAELARLPADILDENERVLIAARRVGAPDVLGRQFAADRAPLIW 77
            +  WR  +   + ++QA ++EL+DHL   +A L    L E+E  LIA +R+G+ D + R+FA + +  +W
Sbjct:   11 IAEWRRYMLRRKGVEQADVDELEDHLRGRVADLAETGLREDEAFLIAVKRMGSVDEVSREFAREHSDRLW 80          
BLAST of mRNA_P-canaliculata_contig96592.23697.1 vs. uniprot
Match: UPI00166A60A4 (permease prefix domain 1-containing protein n=1 Tax=Microbacterium album TaxID=2053191 RepID=UPI00166A60A4)

HSP 1 Score: 49.3 bits (116), Expect = 8.990e-5
Identity = 27/82 (32.93%), Postives = 44/82 (53.66%), Query Frame = 0
Query:    4 VNKALQNWRSALSAEEAIDQAVLNELQDHLEAELARLPADILDENERVLIAARRVGAPDVLGRQFAADRAPLIWARRLYWAA 85
            V   +  WR  +     I  A ++EL+DHL A++  L    LD  E  L+A RR+GA D L R++A + +  +W + +  +A
Sbjct:   16 VEAQIDAWRGYVLRRRPISGADVDELEDHLRAQIDDLGRGGLDGEEAFLVAIRRIGALDSLSREYAREHSDRLWKQLVLTSA 97          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig96592.23697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A543EU98_9MICO4.620e-1039.51Uncharacterized protein n=1 Tax=Microbacterium kyu... [more]
UPI00135B17401.540e-635.14permease prefix domain 1-containing protein n=1 Ta... [more]
A0A1B9NCW1_9MICO5.390e-636.49Uncharacterized protein n=1 Tax=Microbacterium sed... [more]
UPI00166C86741.010e-534.29permease prefix domain 1-containing protein n=1 Ta... [more]
UPI001E4636043.510e-534.29permease prefix domain 1-containing protein n=1 Ta... [more]
UPI00166A60A48.990e-532.93permease prefix domain 1-containing protein n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig96592contigP-canaliculata_contig96592:768..1034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig96592.23697.1mRNA_P-canaliculata_contig96592.23697.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig96592 768..1034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig96592.23697.1 ID=prot_P-canaliculata_contig96592.23697.1|Name=mRNA_P-canaliculata_contig96592.23697.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=89bp
MSNVNKALQNWRSALSAEEAIDQAVLNELQDHLEAELARLPADILDENER
VLIAARRVGAPDVLGRQFAADRAPLIWARRLYWAAIGVL
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