prot_P-canaliculata_contig96580.23696.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig96580.23696.1
Unique Nameprot_P-canaliculata_contig96580.23696.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length138
Homology
BLAST of mRNA_P-canaliculata_contig96580.23696.1 vs. uniprot
Match: A0A523PDA5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PDA5_9BACT)

HSP 1 Score: 65.5 bits (158), Expect = 5.460e-10
Identity = 57/137 (41.61%), Postives = 72/137 (52.55%), Query Frame = 0
Query:    1 WSTVSASGFRASAEAMHLSWVDADGAGL-TDEEVLSVGKHLAGSAETATRAAVLLGIALDLGEGPSTAAKNLLVQRLLSKVAPGSRAENGVDIVAARALAPHLAGDPESTEALLELAVGDAPHPDLAVRVECAAAAL 136
            W T+S  GF    E    +W +A GA + T E + ++   LAG    A RAAVLL      G      A  +L++RL  +    SR  +  D+VAA ALA   AGD    E L  L VG+ PHPDL VRVECA +AL
Sbjct:   71 WDTLSPFGF----ERAIAAWSEAAGAVVFTTESLATLSTALAGQDRRAVRAAVLLAYCRTPG------ATRVLLERLEQRAEAPSRPMDAGDVVAAAALAGR-AGDSRVPERLEALVVGERPHPDLEVRVECARSAL 196          
BLAST of mRNA_P-canaliculata_contig96580.23696.1 vs. uniprot
Match: A0A7C7YVE4_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C7YVE4_9BACT)

HSP 1 Score: 52.8 bits (125), Expect = 1.890e-5
Identity = 43/90 (47.78%), Postives = 53/90 (58.89%), Query Frame = 0
Query:   47 ATRAAVLLGIALDLGEGPSTAAKNLLVQRLLSKVAPGSRAENGVDIVAARALAPHLAGDPESTEALLELAVGDAPHPDLAVRVECAAAAL 136
            A RAAVLL        G   + + LL+ RL S+V    RA +  D+VAA ALA     D +++  L  LAVG+ PHPDL VRVECAA AL
Sbjct:   92 AVRAAVLLA------HGAENSRETLLL-RLESRVLSPERAGDAGDVVAAAALARW--ADEKTSLRLAALAVGERPHPDLEVRVECAAVAL 172          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig96580.23696.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A523PDA5_9BACT5.460e-1041.61Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A7C7YVE4_9BACT1.890e-547.78Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig96580contigP-canaliculata_contig96580:13..426 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig96580.23696.1mRNA_P-canaliculata_contig96580.23696.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig96580 13..426 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig96580.23696.1 ID=prot_P-canaliculata_contig96580.23696.1|Name=mRNA_P-canaliculata_contig96580.23696.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=138bp
WSTVSASGFRASAEAMHLSWVDADGAGLTDEEVLSVGKHLAGSAETATRA
AVLLGIALDLGEGPSTAAKNLLVQRLLSKVAPGSRAENGVDIVAARALAP
HLAGDPESTEALLELAVGDAPHPDLAVRVECAAAALPA
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