prot_P-canaliculata_contig961.23649.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig961.23649.1
Unique Nameprot_P-canaliculata_contig961.23649.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length243
Homology
[Close]
BLAST of mRNA_P-canaliculata_contig961.23649.1 vs. uniprot
Match: A0A6H5KHE5_9PHAE (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHE5_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 1.230e-69
Identity = 143/220 (65.00%), Postives = 162/220 (73.64%), Query Frame = 0 
Query:   24 ELERLKRETILLQQRLAQLSEVHRRLLWKFGQVESERSESEKKVRNRDVLIKQLEQDYVAAVMKHKTQKEDYTKKLLVFRQEVAKLEQEAQRQKSMPSAQSHLERRAVRGGGGSHHAQEVKTLRGGAGRRPPDDAQPWGGLGYDVQSNTYASEQA----SGEGLDSSESGV------------QRTDDGAERRRSM--GTPGRPRGESFLERFLGPRVGS 225
            +L+R K+E I+LQQRLAQLSEVHRRLLWKFG+VE ER+  EKKVRNR+VLIKQLEQD V A  K KTQKED TKKLL  RQEVAKLEQEAQRQK +PS+ SHLERRAVRGGGGSHHAQEVKTLRGG GRR  D+A+PWGGLG+DV+SNTYASE       G G     +G             +R+  GA  R+ M     GR RGE F+ER LGPR G+
Sbjct:  834 DLDRPKKEKIMLQQRLAQLSEVHRRLLWKFGEVELERAAFEKKVRNREVLIKQLEQDLVTAATKLKTQKEDTTKKLLALRQEVAKLEQEAQRQKQLPSSHSHLERRAVRGGGGSHHAQEVKTLRGGNGRRSHDEARPWGGLGFDVKSNTYASESGVENPDGAGALGDRAGATAASAAWASPESRRSSTGAAPRKGMEASAGGRARGEGFIERLLGPRGGT 1053
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig961.23649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KHE5_9PHAE1.230e-6965.00Kinesin motor domain-containing protein n=2 Tax=Ec... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 92..119
NoneNo IPR availableCOILSCoilCoilcoord: 25..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig961contigP-canaliculata_contig961:24442..27398 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig961.23649.1mRNA_P-canaliculata_contig961.23649.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig961 22442..28635 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig961.23649.1 ID=prot_P-canaliculata_contig961.23649.1|Name=mRNA_P-canaliculata_contig961.23649.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=243bp
MKYCGISVRFLSCDCYGIAKGGVELERLKRETILLQQRLAQLSEVHRRLL
WKFGQVESERSESEKKVRNRDVLIKQLEQDYVAAVMKHKTQKEDYTKKLL
VFRQEVAKLEQEAQRQKSMPSAQSHLERRAVRGGGGSHHAQEVKTLRGGA
GRRPPDDAQPWGGLGYDVQSNTYASEQASGEGLDSSESGVQRTDDGAERR
RSMGTPGRPRGESFLERFLGPRVGSTAGTPLPPKFSSSKPGV*
back to top