prot_P-canaliculata_contig961.23647.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig961.23647.1
Unique Nameprot_P-canaliculata_contig961.23647.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length416
Homology
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BLAST of mRNA_P-canaliculata_contig961.23647.1 vs. uniprot
Match: D7FUA9_ECTSI (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUA9_ECTSI)

HSP 1 Score: 365 bits (938), Expect = 3.220e-118
Identity = 220/393 (55.98%), Postives = 267/393 (67.94%), Query Frame = 0 
Query:   40 GAGTGETEFYSWTEXXXXMEVRVTLPPETPAKKVQLSVTKSSLALELEGREGPVLKGTLKGQAQADLSHWTMEEKEGTREKILYLCLEKSIDIEALERNGMPTDWSGVLQGEEVVKVHYPDKDKNFDVSEYVKRMGYDRDRDIDKVDKAMFSGLTEEMKQNLEENLPGSSYTAKDDMIPVVSDPKVSPVIDTGVLGVQAAASPLEPEREILESAACVDDG---DGRGRASPVSG-----GRVDPGESRRVAGVDGDGSSEMSPALTPAG-----EASRPPR-----ELTARQREISAGLRDTYERLLRSGMLGR-NPDETPVGMPDMDELAREYEQNGFMPKDGDFSEADLSNHA-----MAMMSSGLDEDGATASG-LDLNDPAVRAAFDLE 407
            G GTG+TE+YSWTE    MEVRV LPP T AK VQLSVTK+SL L L+GREGPVLKG+LKGQ  AD SHWTMEE E T EK+LYLCLEK  D+EAL  N MP DW GVL+GEE + V+YPDKDK+FDV EYVKRMGYDR+RDI KVDKAMFS LT EMK+NL+  LP SS+T KDDMIPV++DPKVSPVIDTGVLG+     P EPE    E+     DG   +G G A+ +       G  + G +  + G    G  + S A +PAG     + + P +     ELT RQRE++AGLR TYE+L+++GM+   NPD TP  MPDM+E+AR YE  GFM K+GDFSE +LS +           +GL  D     G +DL+DPA R+AF L+
Sbjct:  205 GGGTGDTEYYSWTETDSDMEVRVPLPPGTAAKSVQLSVTKTSLTLGLKGREGPVLKGSLKGQVHADESHWTMEEMEDTGEKVLYLCLEKVADMEALAANSMPQDWVGVLEGEEPLNVYYPDKDKDFDVGEYVKRMGYDRERDIGKVDKAMFSDLTAEMKENLQTTLPKSSFTDKDDMIPVMADPKVSPVIDTGVLGLPTPP-PREPEAVPDETVNVNADGTVSNGGGGAAAIDAEVVREGSWEAGFAPDLGGAAAGGGPDDS-AYSPAGFRADADFNVPMKDGEAGELTERQREVAAGLRRTYEKLVKTGMVQETNPDGTPAKMPDMEEMARAYETEGFMFKEGDFSEEELSKYMDMXXXXXXXXAGLALDDDLPGGDIDLDDPATRSAFGLD 595
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BLAST of mRNA_P-canaliculata_contig961.23647.1 vs. uniprot
Match: A0A7R9Y333_9VIRI (Hypothetical protein (Fragment) n=2 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y333_9VIRI)

HSP 1 Score: 59.7 bits (143), Expect = 3.770e-6
Identity = 28/81 (34.57%), Postives = 50/81 (61.73%), Query Frame = 0 
Query:   34 GRSLVVGAGTGETEFYSWTEXXXXMEVRVTLPPETPAKKVQLSVTKSSLALELEGREGPVLKGTLKGQAQADLSHWTMEEK 114
            G+ L      GE + Y+WT+    +EVRV +P  TPA+ + + ++K++L++ L+G+E P++ G L      D S W++E+K
Sbjct:  207 GKVLPSAGNGGEADGYTWTQTLSEVEVRVLVPQGTPARALDVRISKNALSVALKGQE-PIVSGDLSKPVVVDESMWSLEDK 286
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BLAST of mRNA_P-canaliculata_contig961.23647.1 vs. uniprot
Match: A0A4P9Y4Z5_9FUNG (HSP20-like chaperone n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y4Z5_9FUNG)

HSP 1 Score: 56.2 bits (134), Expect = 1.100e-5
Identity = 32/102 (31.37%), Postives = 58/102 (56.86%), Query Frame = 0 
Query:   49 YSWTEXXXXMEVRVTLPPETPAKKVQLSVTKSSLALELEGREGPVLKGTLKGQAQADLSHWTMEEKEGTREKILYLCLEKSIDIEALERNGMPTDWSGVLQG 150
            Y W +    ++V ++LP  T AK +++S+T +S+ +++ G++ PVL+G L    Q +   WT+E++     K+L++ LEKS      +R      W  V+QG
Sbjct:   25 YRWKQTLADLDVSISLPVGTRAKMLKVSITTTSIRVQVPGQDEPVLEGKLTHSVQEEECTWTVEDQ-----KLLFIHLEKS------DRQQW---WKSVVQG 112
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig961.23647.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FUA9_ECTSI3.220e-11855.98CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7R9Y333_9VIRI3.770e-634.57Hypothetical protein (Fragment) n=2 Tax=Prasinoder... [more]
A0A4P9Y4Z5_9FUNG1.100e-531.37HSP20-like chaperone n=1 Tax=Piptocephalis cylindr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 39..158
e-value: 2.9E-16
score: 61.5
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 44..154
IPR007052CS domainPFAMPF04969CScoord: 49..114
e-value: 2.2E-8
score: 35.0
IPR007052CS domainPROSITEPS51203CScoord: 44..148
score: 11.136
IPR037898NudC familyPANTHERPTHR12356NUCLEAR MOVEMENT PROTEIN NUDCcoord: 44..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig961contigP-canaliculata_contig961:8151..12785 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig961.23647.1mRNA_P-canaliculata_contig961.23647.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig961 7902..13973 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig961.23647.1 ID=prot_P-canaliculata_contig961.23647.1|Name=mRNA_P-canaliculata_contig961.23647.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=416bp
MVGTWWDETGPKKARGWCGGSRRVRGINRNEPKGRSLVVGAGTGETEFYS
WTETDTDMEVRVTLPPETPAKKVQLSVTKSSLALELEGREGPVLKGTLKG
QAQADLSHWTMEEKEGTREKILYLCLEKSIDIEALERNGMPTDWSGVLQG
EEVVKVHYPDKDKNFDVSEYVKRMGYDRDRDIDKVDKAMFSGLTEEMKQN
LEENLPGSSYTAKDDMIPVVSDPKVSPVIDTGVLGVQAAASPLEPEREIL
ESAACVDDGDGRGRASPVSGGRVDPGESRRVAGVDGDGSSEMSPALTPAG
EASRPPRELTARQREISAGLRDTYERLLRSGMLGRNPDETPVGMPDMDEL
AREYEQNGFMPKDGDFSEADLSNHAMAMMSSGLDEDGATASGLDLNDPAV
RAAFDLEGGRDGEGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR007052CS_dom
IPR037898NudC_fam