prot_P-canaliculata_contig96031.23638.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig96031.23638.1
Unique Nameprot_P-canaliculata_contig96031.23638.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length135
Homology
BLAST of mRNA_P-canaliculata_contig96031.23638.1 vs. uniprot
Match: UPI000418E09E (hypothetical protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI000418E09E)

HSP 1 Score: 121 bits (304), Expect = 1.600e-29
Identity = 60/98 (61.22%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    7 DVLETLNNILTSEGFSTSPRAQAFLTYIVRETLEGRANGLKGTTVAQDVFGKGADFDPNQNSIVRVHARRLRAMLRDYYFAHPGRDPVVITMPKGGYK 104
            D+  TL  IL  + FS SP+AQ FL YIV E+LEGRA+ L GTT+AQDVFGK ADFDP Q+S+VRV ARRLR ML+DYY        ++IT+PKGGY+
Sbjct:    9 DITRTLEAILADKIFSASPKAQDFLRYIVTESLEGRADALNGTTIAQDVFGKNADFDPMQDSVVRVTARRLRYMLQDYYAQKNDPSDILITIPKGGYR 106          
BLAST of mRNA_P-canaliculata_contig96031.23638.1 vs. uniprot
Match: A0A4R1NAA0_9RHOB (TolB-like protein n=1 Tax=Shimia isoporae TaxID=647720 RepID=A0A4R1NAA0_9RHOB)

HSP 1 Score: 108 bits (269), Expect = 7.140e-25
Identity = 52/100 (52.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query:    5 KSDVLETLNNILTSEGFSTSPRAQAFLTYIVRETLEGRANGLKGTTVAQDVFGKGADFDPNQNSIVRVHARRLRAMLRDYYFAHPGRDPVVITMPKGGYK 104
            K ++++ L+ +L S  F+  PR Q FLT+IV E LEGR   LKGT +A DVFG+GADFDPN +SIVR+ A +LR  +  YY      D VVIT+PKG Y+
Sbjct:    7 KEEIVQQLDRLLGSPDFAAGPRLQKFLTHIVTEELEGRGELLKGTALAMDVFGRGADFDPNNDSIVRIEAIKLRKAVEHYYLTAGAEDEVVITVPKGRYR 106          
BLAST of mRNA_P-canaliculata_contig96031.23638.1 vs. uniprot
Match: UPI00147E13E6 (hypothetical protein n=3 Tax=Ruegeria TaxID=97050 RepID=UPI00147E13E6)

HSP 1 Score: 103 bits (256), Expect = 4.530e-23
Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 0
Query:    5 KSDVLETLNNILTSEGFSTSPRAQAFLTYIVRETLEGRANGLKGTTVAQDVFGKGADFDPNQNSIVRVHARRLRAMLRDYYFAHPGRDPVVITMPKGGYKIEVKPNETTVSP 116
            K+D+L+ L  I TSE F  S R + FL ++V   LEGR + L+GT +A DVFG+GADFDPN + +VR+ A +LR  L  YY      DPV I++PKG Y+   + N     P
Sbjct:    7 KADILKQLERITTSEDFPCSTRTKTFLEHLVHRELEGRGDELRGTALAMDVFGRGADFDPNADPVVRIEAVKLRKALDYYYLTTGNNDPVSISIPKGQYRPLFETNTQKAEP 118          
BLAST of mRNA_P-canaliculata_contig96031.23638.1 vs. uniprot
Match: UPI001487AD16 (hypothetical protein n=7 Tax=Ruegeria TaxID=97050 RepID=UPI001487AD16)

HSP 1 Score: 101 bits (252), Expect = 1.610e-22
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 0
Query:    3 YAKSDVLETLNNILTSEGFSTSPRAQAFLTYIVRETLEGRANGLKGTTVAQDVFGKGADFDPNQNSIVRVHARRLRAMLRDYYFAHPGRDPVVITMPKGGYKIEVKPN 110
            + K+D+L+ L  I+TSE F  S R ++FL ++V   LEGR + L+GT +A DVFG+GADFDPN + IVR+ A +LR  L  YY      D V I +PKG Y+ + + N
Sbjct:    5 FDKADILKQLERIVTSEDFDGSARTKSFLEHLVHRELEGRGDELRGTALAMDVFGRGADFDPNVDPIVRIEAVKLRKALDYYYLTSGANDLVSIAIPKGQYRPQFEKN 112          
BLAST of mRNA_P-canaliculata_contig96031.23638.1 vs. uniprot
Match: A0A2T0RPW6_9RHOB (TolB-like protein n=1 Tax=Aliiruegeria haliotis TaxID=1280846 RepID=A0A2T0RPW6_9RHOB)

HSP 1 Score: 100 bits (250), Expect = 3.090e-22
Identity = 52/113 (46.02%), Postives = 72/113 (63.72%), Query Frame = 0
Query:    8 VLETLNNILTSEGFSTSPRAQAFLTYIVRETLEGRANGLKGTTVAQDVFGKGADFDPNQNSIVRVHARRLRAMLRDYYFAHPGRDPVVITMPKGGYKIEVKPNETTVSPAPEA 120
            VLE L  +L+S  F+  PR Q FLT++V E L+GR   L+GT +A DVFG+GADFD N + IVR+ A +LR  +  YY      D +VI++PKG Y+ E +  +  V+PA  A
Sbjct:   10 VLEQLARMLSSPDFTAGPRVQKFLTHLVNEELDGRGELLRGTALAMDVFGRGADFDSNNDPIVRIEAVKLRKAIEHYYLTSGTEDDIVISVPKGRYRPEFERRK--VAPAQRA 120          
BLAST of mRNA_P-canaliculata_contig96031.23638.1 vs. uniprot
Match: A0A2S5QYV1_9PROT (Uncharacterized protein n=1 Tax=Methylotenera sp. TaxID=2051956 RepID=A0A2S5QYV1_9PROT)

HSP 1 Score: 100 bits (250), Expect = 3.270e-22
Identity = 55/125 (44.00%), Postives = 75/125 (60.00%), Query Frame = 0
Query:    2 AYAKSDVLETLNNILTSEGFSTSPRAQAFLTYIVRETLEGRANGLKGTTVAQDVFGKGADFDPNQNSIVRVHARRLRAMLRDYYFAHPGRDPVVITMPKGGYKIEVKPNE-TTVSPAPEARLPKQ 125
            A A++ V E LN IL+S  F  SPR Q  L Y+V+ETL G++  LKG T+  ++FG+G+DFDP  ++IVRV   RLR  LR+YY      D V   +PKG Y I +   E +  +  PE   P+Q
Sbjct:   10 APAQTLVYECLNKILSSAPFDKSPRQQELLRYLVKETLAGKSERLKGYTLGVEIFGRGSDFDPTTDAIVRVEVGRLRTKLREYYEESGKNDEVTFVLPKGSYAINITLQEHSQKNKPPEFVAPRQ 134          
BLAST of mRNA_P-canaliculata_contig96031.23638.1 vs. uniprot
Match: UPI00147DA4B0 (hypothetical protein n=1 Tax=Ruegeria arenilitoris TaxID=1173585 RepID=UPI00147DA4B0)

HSP 1 Score: 100 bits (248), Expect = 5.730e-22
Identity = 48/106 (45.28%), Postives = 68/106 (64.15%), Query Frame = 0
Query:    5 KSDVLETLNNILTSEGFSTSPRAQAFLTYIVRETLEGRANGLKGTTVAQDVFGKGADFDPNQNSIVRVHARRLRAMLRDYYFAHPGRDPVVITMPKGGYKIEVKPN 110
            K+D+L+ L  I+ S+ F  S R + FL ++V   LEGR + L+GT +A DVFG+GADFDPN + IVR+ A +LR  L  +Y      DPV I +PKG Y+ + + N
Sbjct:    7 KADILKQLERIVASKDFEGSARTKLFLEHLVHRELEGRGDELRGTALAMDVFGRGADFDPNVDPIVRIEAVKLRKALNYFYLTSGANDPVCIAIPKGQYRPQFEVN 112          
BLAST of mRNA_P-canaliculata_contig96031.23638.1 vs. uniprot
Match: UPI00147A01D5 (hypothetical protein n=3 Tax=Ruegeria TaxID=97050 RepID=UPI00147A01D5)

HSP 1 Score: 99.0 bits (245), Expect = 1.460e-21
Identity = 47/100 (47.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    5 KSDVLETLNNILTSEGFSTSPRAQAFLTYIVRETLEGRANGLKGTTVAQDVFGKGADFDPNQNSIVRVHARRLRAMLRDYYFAHPGRDPVVITMPKGGYK 104
            K D+LE +  I TS+ F  S R ++ L ++V+  LEGR++ L GT +A DVFG+GA+FDPN + +VR  A +LR  L  YY A    DPV I++PKG Y+
Sbjct:    4 KVDILEQVERITTSKDFQCSARTKSLLKHLVQLELEGRSDELNGTALAMDVFGRGANFDPNNDPVVRTEAAKLRKALHYYYLAEGNSDPVAISIPKGQYR 103          
BLAST of mRNA_P-canaliculata_contig96031.23638.1 vs. uniprot
Match: A0A285UXH0_9HYPH (TolB-like protein n=2 Tax=Rhizobium subbaraonis TaxID=908946 RepID=A0A285UXH0_9HYPH)

HSP 1 Score: 99.0 bits (245), Expect = 1.720e-21
Identity = 54/120 (45.00%), Postives = 70/120 (58.33%), Query Frame = 0
Query:    8 VLETLNNILTSEGFSTSPRAQAFLTYIVRETLEGRANGLKGTTVAQDVFGKGADFDPNQNSIVRVHARRLRAMLRDYYFAHPGRDPVVITMPKGGYKIEVKPNETTVSPAPEARLPKQKL 127
            V   L  IL S  F  +PR++ FLTYIV ETL GRA  +K  ++A DVFG+GADFD + + IVR+ A RLR  L  YY      DPVVI++PKG Y    +P     +  P A   ++ L
Sbjct:   42 VRNALARILQSPDFDATPRSRRFLTYIVEETLGGRAERIKAFSIATDVFGRGADFDAHSDPIVRLEAGRLRRALEQYYQRAGSEDPVVISIPKGAYVPVFQPRVVLPANQPGAAAERRPL 161          
BLAST of mRNA_P-canaliculata_contig96031.23638.1 vs. uniprot
Match: A0A432V041_9HYPH (Uncharacterized protein n=1 Tax=Pseudaminobacter arsenicus TaxID=1851146 RepID=A0A432V041_9HYPH)

HSP 1 Score: 99.0 bits (245), Expect = 1.730e-21
Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    8 VLETLNNILTSEGFSTSPRAQAFLTYIVRETLEGRANGLKGTTVAQDVFGKGADFDPNQNSIVRVHARRLRAMLRDYYFAHPGRDPVVITMPKGGY 103
            VLETL  +LTSE F  S RA+  L Y+V +   G A+ LKG T+A DVFGK ADFDP  +++VRV ARRLR +L  Y+      DP+ I++P+G Y
Sbjct:   11 VLETLEKLLTSETFGRSGRARDLLRYLVEQEQAGHADRLKGFTIAIDVFGKDADFDPATDAVVRVQARRLRELLAQYFQTEGANDPIRISIPRGSY 106          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig96031.23638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000418E09E1.600e-2961.22hypothetical protein n=1 Tax=Hellea balneolensis T... [more]
A0A4R1NAA0_9RHOB7.140e-2552.00TolB-like protein n=1 Tax=Shimia isoporae TaxID=64... [more]
UPI00147E13E64.530e-2345.54hypothetical protein n=3 Tax=Ruegeria TaxID=97050 ... [more]
UPI001487AD161.610e-2246.30hypothetical protein n=7 Tax=Ruegeria TaxID=97050 ... [more]
A0A2T0RPW6_9RHOB3.090e-2246.02TolB-like protein n=1 Tax=Aliiruegeria haliotis Ta... [more]
A0A2S5QYV1_9PROT3.270e-2244.00Uncharacterized protein n=1 Tax=Methylotenera sp. ... [more]
UPI00147DA4B05.730e-2245.28hypothetical protein n=1 Tax=Ruegeria arenilitoris... [more]
UPI00147A01D51.460e-2147.00hypothetical protein n=3 Tax=Ruegeria TaxID=97050 ... [more]
A0A285UXH0_9HYPH1.720e-2145.00TolB-like protein n=2 Tax=Rhizobium subbaraonis Ta... [more]
A0A432V041_9HYPH1.730e-2151.04Uncharacterized protein n=1 Tax=Pseudaminobacter a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig96031contigP-canaliculata_contig96031:615..1019 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig96031.23638.1mRNA_P-canaliculata_contig96031.23638.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig96031 597..1019 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig96031.23638.1 ID=prot_P-canaliculata_contig96031.23638.1|Name=mRNA_P-canaliculata_contig96031.23638.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=135bp
MAYAKSDVLETLNNILTSEGFSTSPRAQAFLTYIVRETLEGRANGLKGTT
VAQDVFGKGADFDPNQNSIVRVHARRLRAMLRDYYFAHPGRDPVVITMPK
GGYKIEVKPNETTVSPAPEARLPKQKLLSPGLVAA
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