prot_P-canaliculata_contig95998.23619.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig95998.23619.1
Unique Nameprot_P-canaliculata_contig95998.23619.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length235
Homology
BLAST of mRNA_P-canaliculata_contig95998.23619.1 vs. uniprot
Match: UPI001679FB78 (hypothetical protein n=1 Tax=Roseibacillus persicicus TaxID=454148 RepID=UPI001679FB78)

HSP 1 Score: 230 bits (587), Expect = 3.010e-71
Identity = 127/236 (53.81%), Postives = 164/236 (69.49%), Query Frame = 0
Query:    2 RIKKKSSRRKRLYQKREELLEEMQSTDDYRPITVREQVERLKSEGQDGEDEDKWGQKKNRRTGSPWMLWVILGLVIPIILVGLILFS--RHGNAGSGGRNGEMGLDFNTLSGSAEGLPEDWFMENSGEALSRTVEILEEVSEEGLTLEKVQPLVRGGGQAELLMTLIGEGKWAGFDTSKPTEIRAGFGSSSGIGYMSLEGVRKDFRNFRAYFVREGGEIVLDVAATEALSGVSVSE 235
            R+ K +S R+ LY KR++LL EMQST++ RPI VREQVE LK+ G +G  E+ WG K+ RR GSPWMLW ILGL IP++LVGL++ S  + G   SG  N  MGLDF+ LSG+ +   EDWF++N GEA    +  LE VS+EG TLE+V PLVR   QAE L+ L   G+W  FDTS PT++   +GSS   G+M L G +KDF +FRAYFVR+ GE+++DV ATEA S + V E
Sbjct:   15 RVSKSNSNRETLYLKRQQLLREMQSTEELRPINVREQVETLKNAGSEGTKEEDWGSKEKRRKGSPWMLWAILGLAIPVVLVGLMIVSGGKRGKTASG--NSGMGLDFDVLSGAGQVEAEDWFIKNPGEAFEIGLNTLETVSQEGFTLEEVSPLVRSPEQAERLVQLERAGEWVAFDTSVPTDLVWDYGSSGDAGFMVLMGQKKDFHDFRAYFVRDEGEVLMDVDATEARSDIPVIE 248          
BLAST of mRNA_P-canaliculata_contig95998.23619.1 vs. uniprot
Match: UPI0019039F79 (hypothetical protein n=1 Tax=Roseibacillus ishigakijimensis TaxID=454146 RepID=UPI0019039F79)

HSP 1 Score: 217 bits (552), Expect = 5.410e-66
Identity = 114/223 (51.12%), Postives = 153/223 (68.61%), Query Frame = 0
Query:   13 LYQKREELLEEMQSTDDYRPITVREQVERLKSEGQDGEDEDKWGQKKNRRTGSPWMLWVILGLVIPIILVGLILFSRHGNAGSGGRNGEMGLDFNTLSGSAEGLPEDWFMENSGEALSRTVEILEEVSEEGLTLEKVQPLVRGGGQAELLMTLIGEGKWAGFDTSKPTEIRAGFGSSSGIGYMSLEGVRKDFRNFRAYFVREGGEIVLDVAATEALSGVSVSE 235
            LY+KRE+LL+EMQS  D R I VREQVE LK E  D   E+ WG K+ RR GSPWMLW I+GLVIPI+LVGL++ +      +   N ++G+DF+ LSG  +  PEDWF+ENSG + +R VE+LE +SE+ L LE ++ LVR   QA  L+     G+WAGF+ S+PT +   +GS + +GYM++ GVR DFRNFRAYFV+    +VLD  ATE  S + ++E
Sbjct:   27 LYEKREKLLKEMQSNADLRSIDVREQVELLK-EASDESSEESWGSKRKRRKGSPWMLWAIVGLVIPIVLVGLMIMTAKQRHQADPNNADLGIDFDVLSGGGQEEPEDWFVENSGPSFTRAVEVLESLSEDSLRLEDIETLVRSRSQAGRLIAWQQAGEWAGFNVSQPTNLTWEYGSVAEVGYMTVHGVRSDFRNFRAYFVKAEDGLVLDADATEGYSEIPIAE 248          
BLAST of mRNA_P-canaliculata_contig95998.23619.1 vs. uniprot
Match: A0A353DFQ5_9BACT (Uncharacterized protein n=2 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A353DFQ5_9BACT)

HSP 1 Score: 69.3 bits (168), Expect = 4.220e-10
Identity = 70/234 (29.91%), Postives = 116/234 (49.57%), Query Frame = 0
Query:   12 RLYQKREELLEEMQSTDDYRPITVREQVERLKSEGQDGED-EDKWGQKKNRRTGSPWMLWVILGLVIPIILVGLILFSRHGNAGSGGRN------GEMGLDFNTLSGSAEGLPEDWFMENSGEALSRTVEILEEVSEEGLTLEKVQPLVRGGGQAELLMTLIGEGKWAG---FDTSKPTEIRAGF---GSSSGI---GYMSLEGVRKDFRNFRAYFVRE--GGE--IVLDVAAT 225
            ++++K ++LL  MQ  +  + + V EQ+ RLK +  D +  +D WG K   R  S W+  ++LG+++P+I++G+I+     N   G         G +  DF+   G     P  WF+ +S    S  + IL  +++   TLE+V+P +R      L    I   + A     +T    E+  G    G SS +   G++S+ G  +D + F AYFV E  GG+  +VLD  AT
Sbjct:   39 KVFEKGKDLLFGMQKDEREQHVDVAEQLRRLKQDADDDKPLDDVWGTK---RRSSSWLWILLLGIIMPLIIIGIIISKLTQNPNEGPEIELKDGVGVLKKDFSASDG-----PNGWFLGDSESVTSEVIRILNALND-AKTLEEVEPSIRRSPYRSL--NSISLDRLANPFIAETISDFELIIGLSKPGGSSDVEERGFLSVGGNHEDGQAFTAYFVEEEVGGDKKVVLDWDAT 261          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig95998.23619.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI001679FB783.010e-7153.81hypothetical protein n=1 Tax=Roseibacillus persici... [more]
UPI0019039F795.410e-6651.12hypothetical protein n=1 Tax=Roseibacillus ishigak... [more]
A0A353DFQ5_9BACT4.220e-1029.91Uncharacterized protein n=2 Tax=Verrucomicrobiales... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..235
NoneNo IPR availableTMHMMTMhelixcoord: 66..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig95998contigP-canaliculata_contig95998:405..1109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig95998.23619.1mRNA_P-canaliculata_contig95998.23619.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig95998 405..1109 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig95998.23619.1 ID=prot_P-canaliculata_contig95998.23619.1|Name=mRNA_P-canaliculata_contig95998.23619.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=235bp
ERIKKKSSRRKRLYQKREELLEEMQSTDDYRPITVREQVERLKSEGQDGE
DEDKWGQKKNRRTGSPWMLWVILGLVIPIILVGLILFSRHGNAGSGGRNG
EMGLDFNTLSGSAEGLPEDWFMENSGEALSRTVEILEEVSEEGLTLEKVQ
PLVRGGGQAELLMTLIGEGKWAGFDTSKPTEIRAGFGSSSGIGYMSLEGV
RKDFRNFRAYFVREGGEIVLDVAATEALSGVSVSE
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