prot_P-canaliculata_contig95553.23578.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig95553.23578.1
Unique Nameprot_P-canaliculata_contig95553.23578.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length180
Homology
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BLAST of mRNA_P-canaliculata_contig95553.23578.1 vs. uniprot
Match: A0A848UD40_9GAMM (DUF481 domain-containing protein n=1 Tax=Granulosicoccus sp. TaxID=1943584 RepID=A0A848UD40_9GAMM)

HSP 1 Score: 175 bits (443), Expect = 1.950e-51
Identity = 81/178 (45.51%), Postives = 118/178 (66.29%), Query Frame = 0 
Query:    1 DAQGEPVSDIVRDRTNDRRFLGLEPRWFFRKERNYVFAIVDIDTNEPAGIERSSRQIAGVGYRLVTDKSNWFTAGIGIGRKSLARVSGDRDEDEIGYVGLAFTRLIGKRMKFETAVDSDFGGENRLTELVLGLSWKLGAPISLKLGYEARLNSDISDPRNPFDESVDARATISLQIDV 178
            D  G PV D+V+  TNDRRF+ ++PRWFF    +Y F + D + NEPA IE S+RQ+AGVGY+L   + ++ +A +G+GRK L +VSG+ +E  IGYVGL   R +  ++      DSDFGG NR +E    LSWK+  P+++K  YEAR NS+  +P N FD  V+A  +++L+I++
Sbjct:   99 DEDGLPVRDMVKSTTNDRRFISVQPRWFFTSV-HYAFLLADAEFNEPADIESSTRQVAGVGYKLWKSRRDFISAAVGVGRKKLVQVSGESEEGAIGYVGLRLNRRLNDKIAVALDFDSDFGGRNRFSEAEASLSWKVRGPVAVKFKYEARFNSNFVNPWNTFDAGVEAAMSVNLEIEI 275
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig95553.23578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A848UD40_9GAMM1.950e-5145.51DUF481 domain-containing protein n=1 Tax=Granulosi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007433Protein of unknown function DUF481PFAMPF04338DUF481coord: 12..174
e-value: 4.3E-20
score: 72.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig95553contigP-canaliculata_contig95553:580..1119 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig95553.23578.1mRNA_P-canaliculata_contig95553.23578.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig95553 580..1119 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig95553.23578.1 ID=prot_P-canaliculata_contig95553.23578.1|Name=mRNA_P-canaliculata_contig95553.23578.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=180bp
DAQGEPVSDIVRDRTNDRRFLGLEPRWFFRKERNYVFAIVDIDTNEPAGI
ERSSRQIAGVGYRLVTDKSNWFTAGIGIGRKSLARVSGDRDEDEIGYVGL
AFTRLIGKRMKFETAVDSDFGGENRLTELVLGLSWKLGAPISLKLGYEAR
LNSDISDPRNPFDESVDARATISLQIDVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007433DUF481