prot_P-canaliculata_contig95439.23570.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig95439.23570.1
Unique Nameprot_P-canaliculata_contig95439.23570.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length193
Homology
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BLAST of mRNA_P-canaliculata_contig95439.23570.1 vs. uniprot
Match: A0A1T1ASI7_RHOFE (Uncharacterized protein n=2 Tax=Rhodoferax fermentans TaxID=28066 RepID=A0A1T1ASI7_RHOFE)

HSP 1 Score: 57.8 bits (138), Expect = 9.500e-7
Identity = 48/185 (25.95%), Postives = 74/185 (40.00%), Query Frame = 0 
Query:   16 TFIVYGNLNSPYWFVGLEGNADPAAEESI-------DHAVQKECDSARRFREAGQLSLDNLTNSGTWTRYQTTWGAYTKLMFAIERADSKASGDLWTLSEVKTYQTKWLGELDVPAELPSGCLMELFDLARNRKLPWPFGLLAEREGLGYLKSASDYEKEVAVDRAAKLLTLAETHQPRFLMCFG 193
            TF  YGNL +PYWF+G+E    P+ E  +       +   +K  D AR +     +       +G   + Q TW    + +         A G      EV     + L       E    CL+EL  L  +    + +  L E +   Y  S S Y + V  +R  K+  L  TH+PR ++ +G
Sbjct:    3 TFYGYGNLQAPYWFIGMEEGCGPSWENDVIPRFKIWESRGRKMIDDAREYHFDLGIREFWEAPTGRQVKVQRTWRRLLETLLC-------AKGQ-----EVSEENVRQLQANAFAMEGSDTCLLELLPLPSSSIKSFDYVRL-ENQDHAYFASRSKYRRYVLANRIPKIRELVLTHRPRHVVLYG 174
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig95439.23570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1T1ASI7_RHOFE9.500e-725.95Uncharacterized protein n=2 Tax=Rhodoferax ferment... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig95439contigP-canaliculata_contig95439:78..656 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig95439.23570.1mRNA_P-canaliculata_contig95439.23570.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig95439 78..656 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig95439.23570.1 ID=prot_P-canaliculata_contig95439.23570.1|Name=mRNA_P-canaliculata_contig95439.23570.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=193bp
MTKQVDANDLRELHETFIVYGNLNSPYWFVGLEGNADPAAEESIDHAVQK
ECDSARRFREAGQLSLDNLTNSGTWTRYQTTWGAYTKLMFAIERADSKAS
GDLWTLSEVKTYQTKWLGELDVPAELPSGCLMELFDLARNRKLPWPFGLL
AEREGLGYLKSASDYEKEVAVDRAAKLLTLAETHQPRFLMCFG
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