prot_P-canaliculata_contig95405.23567.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig95405.23567.1
Unique Nameprot_P-canaliculata_contig95405.23567.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length139
Homology
BLAST of mRNA_P-canaliculata_contig95405.23567.1 vs. uniprot
Match: A0A518ER38_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518ER38_9BACT)

HSP 1 Score: 88.2 bits (217), Expect = 1.290e-17
Identity = 66/147 (44.90%), Postives = 89/147 (60.54%), Query Frame = 0
Query:    1 FSEAIDPSSL------TNAFLVFDLFAGIPVPVQS-FVVANGRVVVLFPITGTFTAATQYELQFTDEQAIVDLNGQPLALDFGESLL-----DFSVVEDDGTIPPRVIYSYPNDFSTTDSDSSEIVIGFDRQVDPSTVDDNSFIVTV 135
            FSE+++P+SL      T+AF V D       P+    +V +GRVVVL P+  ++     Y++ F+ +Q I DLNGQ L +D  + LL     D S V D+    PR+IYSYP D S  + D+SEIVIGFDRQ+D ST+D NSF V V
Sbjct:  113 FSESLNPASLFDLQNQTSAFRVVDFTFQQDYPMAPPQLVGDGRVVVLLPLV-SYREGGSYQVFFSADQRIADLNGQ-LIVDPSDQLLVEIFVDSSSVMDE----PRLIYSYPPDGSFNNPDTSEIVIGFDRQMDDSTIDTNSFDVKV 253          
BLAST of mRNA_P-canaliculata_contig95405.23567.1 vs. uniprot
Match: A0A7Y4WH28_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4WH28_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 3.200e-10
Identity = 47/140 (33.57%), Postives = 80/140 (57.14%), Query Frame = 0
Query:    1 FSEAIDPSSLTNAFLVFDLFAG----IPVP-VQSFVVANGRVVVLFPITGTFTAATQYELQFTDEQAIVDLNGQPLALDFGESLLDFSVVEDDGTIPPRVIYSYPNDFSTTDSDSSEIVIGFDRQVDPSTVDDNSFIVTV 135
            FSE+I   ++  A  +  L  G     PV  V++ +V++GRV++L P   T    + Y ++ +++  ++DL GQ L +D G SL  F+V ED     P ++ ++P D +T  S+++++V+ FDR V  STV   +F V V
Sbjct:   60 FSESIQEETIDGALEIVPLLGGGQPGQPVSGVRALLVSDGRVLLLLPPPQTPLLVSDYLVRLSEQALVLDLTGQELDVDPGASLGTFTV-EDSAPAVPGLVMTFPGDGATNQSETTQLVVVFDRPVLASTVTAAAFDVRV 198          
BLAST of mRNA_P-canaliculata_contig95405.23567.1 vs. uniprot
Match: A0A2D6HAI1_9BACT (Big_5 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HAI1_9BACT)

HSP 1 Score: 61.2 bits (147), Expect = 3.320e-8
Identity = 53/143 (37.06%), Postives = 80/143 (55.94%), Query Frame = 0
Query:    1 FSEAIDPSSLTNAF-LVFDLFAG--IPVPVQ-SFVVANGRVVVLFPITGTFTAATQYELQFTDEQAIVDLNGQPLALDFGESLLDFSVVEDDGTIPPRVIYSYPNDFSTTDSDSSEIVIGFDRQVDPSTVDDNSFIVTVDDVD 139
            FSE++ P SL  AF L+ D  AG  +P+P+  S ++ +GRVVVL P      A T Y L+  +  +  DL G  L       L  F V  +  T  P+++ ++P + +   S ++E+V+ FDR +DP+TV  +SF VTVD  D
Sbjct:   93 FSESMAPDSLEGAFELLQDDGAGGGLPLPLAGSALLGDGRVVVLVP--PPLLAGTTYTLRVAETGSPHDLTGHGLLAASDRVLGTFGVALNLPT-DPQIVATWPPEDTVDQSATTEVVVVFDRVMDPTTVTGSSFQVTVDGAD 232          
BLAST of mRNA_P-canaliculata_contig95405.23567.1 vs. uniprot
Match: A0A2D5ASM6_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5ASM6_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 3.920e-7
Identity = 45/138 (32.61%), Postives = 77/138 (55.80%), Query Frame = 0
Query:    1 FSEAIDPSSLTNAFLVFDLFAGI---PVPVQSFVVANGRVVVLFPITGTFTAATQYELQFTDEQAIVDLNGQPLALDFGESLLDFSVVEDDGTIPPRVIYSYPNDFSTTD--SDSSEIVIGFDRQVDPSTVDDNSFIV 133
            FSE++  +SL +AF +  L  G+     P+   ++A GRV V F           Y+++ T     +D+ GQ   L   + +++F+V  D   I P+++ ++P D ++T   S++ +IV+ FDR VD S+VD NSF+V
Sbjct:   87 FSESMQVASLQSAFELVTLAGGVIGPGFPLTGQLLAEGRVFVAF--APEELEINDYQVRPTGMPVPMDMTGQEAQLGL-DPVINFTVSAD-APIDPQLVANFPGDVASTTGASETGDIVVVFDRPVDESSVDANSFVV 220          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig95405.23567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A518ER38_9BACT1.290e-1744.90Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A7Y4WH28_9BACT3.200e-1033.57Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2D6HAI1_9BACT3.320e-837.06Big_5 domain-containing protein n=1 Tax=Planctomyc... [more]
A0A2D5ASM6_9BACT3.920e-732.61Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032812SbsA, Ig-like domainPFAMPF13205Big_5coord: 1..82
e-value: 7.2E-7
score: 29.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig95405contigP-canaliculata_contig95405:422..838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig95405.23567.1mRNA_P-canaliculata_contig95405.23567.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig95405 422..838 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig95405.23567.1 ID=prot_P-canaliculata_contig95405.23567.1|Name=mRNA_P-canaliculata_contig95405.23567.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=139bp
FSEAIDPSSLTNAFLVFDLFAGIPVPVQSFVVANGRVVVLFPITGTFTAA
TQYELQFTDEQAIVDLNGQPLALDFGESLLDFSVVEDDGTIPPRVIYSYP
NDFSTTDSDSSEIVIGFDRQVDPSTVDDNSFIVTVDDVD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032812SbsA_Ig