prot_P-canaliculata_contig9525.23549.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig9525.23549.1
Unique Name	prot_P-canaliculata_contig9525.23549.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	335

Homology

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BLAST of mRNA_P-canaliculata_contig9525.23549.1 vs. uniprot
Match: D8LRZ5_ECTSI (DNA gyrase subunit B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ5_ECTSI)

HSP 1 Score: 558 bits (1437), Expect = 1.310e-193
Identity = 285/334 (85.33%), Postives = 301/334 (90.12%), Query Frame = 0

Query:    1 RQGLTAVISVKVPEPEFEGQTKNRLGNPEVRAIVDSVLNEELVKVFEWHPKILGAIVDKAVSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPSESEIYIVEGDSAAGSAKQGRDRSTQAILPLRGKILNIEKCAPERIYQNAELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQRALIEEGFVYIACPPLYKIKHGKKEKYVYTQEECDKAVSELSGSGSASSAGSSSLPPTVQLQRFKGLGEMMPDQLWETTMDPAKRILKLVTVEDATAADRVFSALMGDNVAPRKDFINQHSDNLKLGDLDF 334
            R+GLTAV+SVKVPEPEFEGQTKNRLGNPEVR IVDS++ EELVK+FEWHPKILGAI+DKA SAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDP ESEIYIVEGDSAAGSAKQGRDR TQAILPLRGKILNIEKCA ERIYQN ELQALISALGLGIKGNEFDA SLRYHRIV+MTDADVDGSHIRILLLTFFFRYQR+LIE GFV+IACPPLYKIK GK EKYVYTQEECD AVSEL  S            P VQLQRFKGLGEMMP QLW+TTMDPA+R LKLVTVEDA AADR+FS LMGDNV PRK+FIN+H++NLKL DLDF
Sbjct:  367 REGLTAVVSVKVPEPEFEGQTKNRLGNPEVRGIVDSIVGEELVKLFEWHPKILGAILDKASSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPVESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCASERIYQNNELQALISALGLGIKGNEFDASSLRYHRIVVMTDADVDGSHIRILLLTFFFRYQRSLIENGFVFIACPPLYKIKQGKTEKYVYTQEECDSAVSELPAS------------PAVQLQRFKGLGEMMPQQLWDTTMDPARRTLKLVTVEDAAAADRIFSVLMGDNVGPRKEFINEHANNLKLDDLDF 688

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BLAST of mRNA_P-canaliculata_contig9525.23549.1 vs. uniprot
Match: A0A835Z3N6_9STRA (DNA gyrase subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N6_9STRA)

HSP 1 Score: 501 bits (1291), Expect = 1.230e-171
Identity = 256/334 (76.65%), Postives = 285/334 (85.33%), Query Frame = 0

Query:    1 RQGLTAVISVKVPEPEFEGQTKNRLGNPEVRAIVDSVLNEELVKVFEWHPKILGAIVDKAVSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPSESEIYIVEGDSAAGSAKQGRDRSTQAILPLRGKILNIEKCAPERIYQNAELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQRALIEEGFVYIACPPLYKIKHGKKEKYVYTQEECDKAVSELSGSGSASSAGSSSLPPTVQLQRFKGLGEMMPDQLWETTMDPAKRILKLVTVEDATAADRVFSALMGDNVAPRKDFINQHSDNLKLGDLDF 334
            R+GLTA++ VKVPEPEFEGQTKNRLGNPEVR+IVD+V++E+L KVFEW+PK+L AI+DKA SAQ AAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPSE+EIYIVEGDSAAGSAKQGRDR TQAILPLRGKILNIEKCA E+IYQN ELQALISALGLG+KG +F+   LRYHRIVIMTDADVDGSHIRILLLTFFFRYQRAL+E G VYIACPPLYK+  G+K+ YVYTQEE D  +  L  S            P V LQRFKGLGEMMP QLWETTMDPAKR LK V +EDA  AD++F+ LMGD+VAPRK+FIN H+ +L L DLDF
Sbjct:  358 REGLTAIVHVKVPEPEFEGQTKNRLGNPEVRSIVDAVVSEQLQKVFEWNPKVLAAIIDKATSAQQAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPSETEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKCANEKIYQNNELQALISALGLGVKGVDFELEKLRYHRIVIMTDADVDGSHIRILLLTFFFRYQRALLEGGHVYIACPPLYKVSQGRKDVYVYTQEELDALLPTLPPS------------PAVSLQRFKGLGEMMPQQLWETTMDPAKRTLKAVRIEDAVVADKMFTMLMGDHVAPRKEFINTHAKSLVLDDLDF 679

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BLAST of mRNA_P-canaliculata_contig9525.23549.1 vs. uniprot
Match: A0A4D9D639_9STRA (DNA gyrase subunit B n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D639_9STRA)

HSP 1 Score: 488 bits (1255), Expect = 2.130e-165
Identity = 248/334 (74.25%), Postives = 278/334 (83.23%), Query Frame = 0

Query:    1 RQGLTAVISVKVPEPEFEGQTKNRLGNPEVRAIVDSVLNEELVKVFEWHPKILGAIVDKAVSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPSESEIYIVEGDSAAGSAKQGRDRSTQAILPLRGKILNIEKCAPERIYQNAELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQRALIEEGFVYIACPPLYKIKHGKKEKYVYTQEECDKAVSELSGSGSASSAGSSSLPPTVQLQRFKGLGEMMPDQLWETTMDPAKRILKLVTVEDATAADRVFSALMGDNVAPRKDFINQHSDNLKLGDLDF 334
            R+GLTA++SVKVP+PEFEGQTKNRLGNPEVR IVD+++ E LV  FEW+P++LGAIVDKA+SAQ AA AAKAARDMVRRKSLL +TVLPGKLADC+SRDP ESEIYIVEGDSAAGSAKQGRDR TQAILPLRGKILNIEK A E+IYQN ELQALISALGLGIKGNEFD  +LRYHRI+IMTDADVDG+HIRILLLTF FRYQRAL+E G+VYIACPPLYK+  GK  KY YTQEE  +  S   G               + LQRFKGLGEMMP QLWETTM+PA RILK VT+EDA  AD++F  LMGD V PRKDFIN+++D L+L DLDF
Sbjct:  418 REGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFEWNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSSRDPVESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQRALVERGYVYIACPPLYKVTQGKTVKYAYTQEELAEVQSSFKGK------------TALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLMGDAVGPRKDFINRNADALRLDDLDF 739

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BLAST of mRNA_P-canaliculata_contig9525.23549.1 vs. uniprot
Match: A0A7S2RLA2_9STRA (DNA gyrase subunit B n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLA2_9STRA)

HSP 1 Score: 475 bits (1222), Expect = 2.340e-160
Identity = 239/334 (71.56%), Postives = 280/334 (83.83%), Query Frame = 0

Query:    1 RQGLTAVISVKVPEPEFEGQTKNRLGNPEVRAIVDSVLNEELVKVFEWHPKILGAIVDKAVSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPSESEIYIVEGDSAAGSAKQGRDRSTQAILPLRGKILNIEKCAPERIYQNAELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQRALIEEGFVYIACPPLYKIKHGKK-EKYVYTQEECDKAVSELSGSGSASSAGSSSLPPTVQLQRFKGLGEMMPDQLWETTMDPAKRILKLVTVEDATAADRVFSALMGDNVAPRKDFINQHSDNLKLGDLD 333
            R+GLTAV++VKVPEPEFEGQTKNRLGNP VR++VDSV+ E L++VFEWHPK+L A+VDKA +AQA     KAARDMVRRKSLLTSTVLPGKLADCASRDP+ SEIYIVEGDSAAGSAKQGRDR TQA+LPLRGKILNIEK APE+IYQN ELQALISALGLG+K  EFD  SLRYH +VIMTDADVDG+HIRILLLTFF+RYQR LIE+G+VYIACPPL+K+  G + E+Y+YTQEE D+ + EL+G            P  V +QRFKGLGEMMP QLW+TTM+P  R +++VTV+DA AADR+FS LMGD V PR++FI  H++ L+ GDLD
Sbjct:  421 REGLTAVVTVKVPEPEFEGQTKNRLGNPGVRSVVDSVVGEALLQVFEWHPKVLSALVDKASAAQAXXXXXKAARDMVRRKSLLTSTVLPGKLADCASRDPATSEIYIVEGDSAAGSAKQGRDRQTQAVLPLRGKILNIEKAAPEKIYQNNELQALISALGLGVKNGEFDLASLRYHSVVIMTDADVDGAHIRILLLTFFYRYQRRLIEDGYVYIACPPLFKVTQGTRIERYLYTQEELDELLPELAGQ-----------PGKVTVQRFKGLGEMMPRQLWDTTMNPETRKMRIVTVDDAAAADRMFSVLMGDAVEPRREFITDHAELLEFGDLD 743

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BLAST of mRNA_P-canaliculata_contig9525.23549.1 vs. uniprot
Match: A0A7S2P1J8_9STRA (DNA topoisomerase 2 n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P1J8_9STRA)

HSP 1 Score: 456 bits (1173), Expect = 4.720e-155
Identity = 235/338 (69.53%), Postives = 274/338 (81.07%), Query Frame = 0

Query:    1 RQGLTAVISVKVPEPEFEGQTKNRLGNPEVRAIVDSVLNEELVKVFEWHPKILGAIVDKAVSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPSESEIYIVEGDSAAGSAKQGRDRSTQAILPLRGKILNIEKCAPERIYQNAELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQRALIEEGFVYIACPPLYKIK-----HGKKEKYVYTQEECDKAVSELSGSGSASSAGSSSLPPTVQLQRFKGLGEMMPDQLWETTMDPAKRILKLVTVEDATAADRVFSALMGDNVAPRKDFINQHSDNLKLGDLD 333
            R+GLTA+++V + EPEFEGQTK RLGNPEVR  VD+++++EL ++FEW P IL AIVDKA  AQ+AA AA+AARDMVRRKSLLTSTVLPGKLADCASR P ESEI+IVEGDSAAGSAKQGRDR+TQAILPLRGKILNIE+ A E+IYQN ELQ+LISALGLGIKG E D  SLRYHRIVIMTDADVDG+HIR+LLLTFF+RYQR LIE G+VYIACPPLYK+      +G KE YVY  EE D  +++++ S              V +QRFKGLGEMMP+QLW TTMDPA+R +  VTV+D  AAD + S LMGD VAPRKDFI+ H++NLKL DLD
Sbjct:  260 REGLTAIVAVNIAEPEFEGQTKGRLGNPEVRPSVDTLVSKELTRLFEWSPDILNAIVDKASDAQSAAVAARAARDMVRRKSLLTSTVLPGKLADCASRTPEESEIFIVEGDSAAGSAKQGRDRNTQAILPLRGKILNIERAAAEKIYQNNELQSLISALGLGIKGTELDLSSLRYHRIVIMTDADVDGAHIRVLLLTFFYRYQRELIENGYVYIACPPLYKLTTSRTVNGSKEHYVYNDEEKDSLLNDVTASECK-----------VTIQRFKGLGEMMPEQLWSTTMDPARRKMLKVTVDDCAAADSMLSILMGDAVAPRKDFISTHAENLKLDDLD 586

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BLAST of mRNA_P-canaliculata_contig9525.23549.1 vs. uniprot
Match: A0A7S3XY21_HETAK (DNA gyrase subunit B n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY21_HETAK)

HSP 1 Score: 456 bits (1173), Expect = 1.180e-153
Identity = 233/335 (69.55%), Postives = 270/335 (80.60%), Query Frame = 0

Query:    1 RQGLTAVISVKVPEPEFEGQTKNRLGNPEVRAIVDSVLNEELVKVFEWHPKILGAIVDKAVSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPSESEIYIVEGDSAAGSAKQGRDRSTQAILPLRGKILNIEKCAPERIYQNAELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQRALIEEGFVYIACPPLYKIKHGKK-EKYVYTQEECDKAVSELSGSGSASSAGSSSLPPTVQLQRFKGLGEMMPDQLWETTMDPAKRILKLVTVEDATAADRVFSALMGDNVAPRKDFINQHSDNLKLGDLDF 334
            R+GLTA+I+VKVPEPEFEGQTKNRLGNPEVR+IVDS++ E+L  +FEWHPK+L A++DKA SA        AARD+VRRKSLLTSTVLPGKLADCAS+DP  SEIY+VEGDSAAGSAKQGRDR +QAILPLRGKILNIEK A E+IYQN ELQALISALGLGIKG EF   +LRYH+I+IMTDADVDGSHIRILLLTFF+RYQR LIE+GFVY+ACPPLYK+  G+   KYV+ Q E D  + EL  S            P  QLQRFKGLGEMMP QLW+TTM+P  RILK VTVE++  AD++ + LMGD VAPRK+FI+ H+  L + DLDF
Sbjct:  369 REGLTAIINVKVPEPEFEGQTKNRLGNPEVRSIVDSIVAEQLNSIFEWHPKVLAAVLDKAQSAAXXXXXXXAARDLVRRKSLLTSTVLPGKLADCASKDPFRSEIYVVEGDSAAGSAKQGRDRESQAILPLRGKILNIEKAASEKIYQNNELQALISALGLGIKGQEFAESNLRYHKIIIMTDADVDGSHIRILLLTFFYRYQRELIEKGFVYVACPPLYKVTQGRGFSKYVFDQAELDALLKELPAS------------PAPQLQRFKGLGEMMPTQLWDTTMNPETRILKRVTVEESALADKLLTVLMGDAVAPRKEFISTHAAELDMEDLDF 691

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BLAST of mRNA_P-canaliculata_contig9525.23549.1 vs. uniprot
Match: A0A7S2GF92_9STRA (DNA topoisomerase 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GF92_9STRA)

HSP 1 Score: 446 bits (1146), Expect = 2.280e-151
Identity = 228/334 (68.26%), Postives = 267/334 (79.94%), Query Frame = 0

Query:    1 RQGLTAVISVKVPEPEFEGQTKNRLGNPEVRAIVDSVLNEELVKVFEWHPKILGAIVDKAVSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPSESEIYIVEGDSAAGSAKQGRDRSTQAILPLRGKILNIEKCAPERIYQNAELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQRALIEEGFVYIACPPLYKIKHGKKEKYVYTQEECDKAVSELSGSGSASSAGSSSLPPTVQLQRFKGLGEMMPDQLWETTMDPAKRILKLVTVEDATAADRVFSALMGDNVAPRKDFINQHSDNLKLGDLDF 334
            R+GLTAV+SVKVP+PEFEGQTKNRLG+P VR+ VD+V+   L+++FEWHPK+L AIV KA +AQ AA AAKAA+D+VRRKSLLTSTVLPGKLADC+ R+PS  EI++VEGDSAAGSAKQGRDR+TQAILPLRGKILNIEK APE+IYQNAELQALISALGLG+    FD  SLRYHRIVIMTDADVDG+HIRILLLTF FRYQR ++E+G+VYIACPPLYK+  G    Y YTQEE D+    L+   S            + +QRFKGLGEMMP QLW+TTM+P  R ++ VTVEDA  ADR+ + LMGD VAPR+DFI    +NL   DLDF
Sbjct:  236 REGLTAVVSVKVPDPEFEGQTKNRLGSPGVRSAVDTVVGAALLELFEWHPKLLDAIVLKAAAAQDAAKAAKAAKDLVRRKSLLTSTVLPGKLADCSMREPSMCEIFVVEGDSAAGSAKQGRDRNTQAILPLRGKILNIEKAAPEKIYQNAELQALISALGLGMHSAPFDPDSLRYHRIVIMTDADVDGAHIRILLLTFLFRYQREIVEKGYVYIACPPLYKVTQGATNSYYYTQEELDEFKDNLAPESSK-----------IIIQRFKGLGEMMPQQLWDTTMNPVTRRMRRVTVEDAVMADRMLTVLMGDAVAPRRDFITSRVENLSPEDLDF 558

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BLAST of mRNA_P-canaliculata_contig9525.23549.1 vs. uniprot
Match: A0A7S2UBQ2_9STRA (DNA topoisomerase 2 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBQ2_9STRA)

HSP 1 Score: 441 bits (1133), Expect = 3.320e-146
Identity = 228/337 (67.66%), Postives = 270/337 (80.12%), Query Frame = 0

Query:    1 RQGLTAVISVKVPEPEFEGQTKNRLGNPEVRAIVDSVLNEELVKVFEWHPKILGAIVDKAVSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPSESEIYIVEGDSAAGSAKQGRDRSTQAILPLRGKILNIEKCAPERIYQNAELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQRALIEEGFVYIACPPLYKIKHG----KKEKYVYTQEECDKAVSELSGSGSASSAGSSSLPPTVQLQRFKGLGEMMPDQLWETTMDPAKRILKLVTVEDATAADRVFSALMGDNVAPRKDFINQHSDNLKLGDLD 333
            R+GLTA+ISV V EPEFEGQTK RLGNPEVR  VD++L++EL K+F++ P IL AI DKA  AQAAAAAA+AARDMVRRK+LLTST+LPGKLADCASRDPSESEI+IVEGDSAAGSAKQGRDR TQAILPLRGKILNIE+ + ERIYQN+ELQ LISALGLG+KG+EFD  +LRY R+VIMTDADVDG+HIR+LLLTFFFRYQR LIE G VYIA PPLYK+  G    KKE+Y + +EE ++A+ +            +       +QRFKGLGEMMP+QLW TTMDP KR +  VT+ D   AD+  S LMGD V PR++FI+ H++NLK+GDLD
Sbjct:  469 REGLTAIISVSVTEPEFEGQTKGRLGNPEVRPAVDALLSDELTKLFDFRPDILTAIFDKANQAQAAAAAARAARDMVRRKTLLTSTILPGKLADCASRDPSESEIFIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIERASTERIYQNSELQGLISALGLGVKGSEFDETALRYGRVVIMTDADVDGAHIRVLLLTFFFRYQRELIERGHVYIAQPPLYKVSVGSGRMKKEQYCFNEEEKEEALRKFLKLSKDDDLDKALSEGKASIQRFKGLGEMMPEQLWTTTMDPEKRTMLQVTLNDGALADQTLSILMGDAVGPRRNFISSHAENLKMGDLD 805

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BLAST of mRNA_P-canaliculata_contig9525.23549.1 vs. uniprot
Match: B7G298_PHATC (DNA topoisomerase 2 n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G298_PHATC)

HSP 1 Score: 435 bits (1118), Expect = 6.510e-145
Identity = 228/338 (67.46%), Postives = 266/338 (78.70%), Query Frame = 0

Query:    1 RQGLTAVISVKVPEPEFEGQTKNRLGNPEVRAIVDSVLNEELVKVFEWHPKILGAIVDKAVSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPSESEIYIVEGDSAAGSAKQGRDRSTQAILPLRGKILNIEKCAPERIYQNAELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQRALIEEGFVYIACPPLYKIKHG----KKEKYVYTQEECDKAVSELSGSGSASSAGSSSLPPTVQLQRFKGLGEMMPDQLWETTMDPAKRILKLVTVEDATAADRVFSALMGDNVAPRKDFINQHSDNLKLGDLDF 334
            R+GLTA++SV V EPEFEGQTK RLGNPEVR  VDS+L+ EL K+F++ P+IL AI +KA SAQAAAAAAKAARDMVRRK+LLTST+LPGKLADCASRDP ESEI+IVEGDSAAGSAKQGRDR TQAILPLRGKILNIE+ A ERIYQN ELQ LISALGLG+KG+EFD  SLRY RIVIMTDADVDG+HIR+LLLTFF+RYQR L+E G VYIA PPLYK+  G    +KE Y +   E +  + +   +G             V LQRFKGLGEMMP+QLW TTMDP +R +  VTV DA+ AD+  S LMGD VAPRK+FI+  ++ L++ DLD 
Sbjct:  402 REGLTAIVSVSVSEPEFEGQTKGRLGNPEVRPAVDSLLSAELTKLFDFRPEILDAIYNKASSAQAAAAAAKAARDMVRRKTLLTSTILPGKLADCASRDPEESEIFIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIERAATERIYQNTELQGLISALGLGVKGSEFDPKSLRYGRIVIMTDADVDGAHIRVLLLTFFYRYQRELVENGHVYIAQPPLYKVSVGSGRSRKEGYAFNDTERNTVMMQALAAGK------------VSLQRFKGLGEMMPEQLWSTTMDPERRTMLQVTVNDASMADQTLSILMGDTVAPRKEFISTQAETLRVDDLDL 727

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BLAST of mRNA_P-canaliculata_contig9525.23549.1 vs. uniprot
Match: A0A0A1ZVR5_PROMR (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Prochlorococcus marinus str. MIT 9116 TaxID=167544 RepID=A0A0A1ZVR5_PROMR)

HSP 1 Score: 420 bits (1079), Expect = 2.990e-144
Identity = 212/334 (63.47%), Postives = 258/334 (77.25%), Query Frame = 0

Query:    1 RQGLTAVISVKVPEPEFEGQTKNRLGNPEVRAIVDSVLNEELVKVFEWHPKILGAIVDKAVSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPSESEIYIVEGDSAAGSAKQGRDRSTQAILPLRGKILNIEKCAPERIYQNAELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQRALIEEGFVYIACPPLYKIKHGKKEKYVYTQEECDKAVSELSGSGSASSAGSSSLPPTVQLQRFKGLGEMMPDQLWETTMDPAKRILKLVTVEDATAADRVFSALMGDNVAPRKDFINQHSDNLKLGDLDF 334
            R+GLT V+SVKVP+PEFEGQTK +LGN EVR IVDS++ E L K  E++P IL  I++KA+ +  AA AA+ AR++VRRKS+L S+ LPGKLADC+SRDPSESEIYIVEGDSA GSAKQGRDR+ QAILPLRGKILNIEK    +IY+N E+Q+LI+ALGLGIKG EFD  SLRYHR+VIMTDADVDG+HIR LLLTFF+RYQR L+E GF+YIACPPLYK++ GK  KY Y + +    +    G G  ++           +QRFKGLGEMMP QLW+TTM+P  R++K V +EDA  ADR+F+ LMGD VAPR++FI  HS NL L  LD 
Sbjct:   28 REGLTVVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLIGEALTKYMEFNPGILDLILEKAIQSFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRNFQAILPLRGKILNIEKTDDSKIYKNTEIQSLITALGLGIKGEEFDVSSLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRELVERGFIYIACPPLYKVERGKNHKYCYNENQLKDTIL---GFGENAN---------YNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILMGDKVAPRREFIETHSSNLDLATLDI 349

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig9525.23549.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig9525.23549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LRZ5_ECTSI	1.310e-193	85.33	DNA gyrase subunit B n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A835Z3N6_9STRA	1.230e-171	76.65	DNA gyrase subunit B n=1 Tax=Tribonema minus TaxID...	[more]
A0A4D9D639_9STRA	2.130e-165	74.25	DNA gyrase subunit B n=2 Tax=Monodopsidaceae TaxID...	[more]
A0A7S2RLA2_9STRA	2.340e-160	71.56	DNA gyrase subunit B n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2P1J8_9STRA	4.720e-155	69.53	DNA topoisomerase 2 n=2 Tax=Leptocylindrus danicus...	[more]
A0A7S3XY21_HETAK	1.180e-153	69.55	DNA gyrase subunit B n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2GF92_9STRA	2.280e-151	68.26	DNA topoisomerase 2 n=1 Tax=Dictyocha speculum Tax...	[more]
A0A7S2UBQ2_9STRA	3.320e-146	67.66	DNA topoisomerase 2 n=1 Tax=Attheya septentrionali...	[more]
B7G298_PHATC	6.510e-145	67.46	DNA topoisomerase 2 n=4 Tax=Phaeodactylum tricornu...	[more]
A0A0A1ZVR5_PROMR	2.990e-144	63.47	DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Prochl...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00418	TPI2FAMILY	coord: 172..188 score: 68.29 coord: 190..207 score: 50.81 coord: 210..222 score: 52.25 coord: 105..119 score: 61.54 coord: 264..280 score: 55.24
None	No IPR available	PANTHER	PTHR45866	FAMILY NOT NAMED	coord: 115..333 coord: 1..115
None	No IPR available	PANTHER	PTHR45866:SF8		coord: 115..333 coord: 1..115
IPR000565	DNA topoisomerase, type IIA, subunit B	PRINTS	PR01159	DNAGYRASEB	coord: 301..317 score: 58.24 coord: 155..164 score: 58.33 coord: 285..297 score: 45.13 coord: 45..59 score: 28.44 coord: 59..79 score: 46.51
IPR001241	DNA topoisomerase, type IIA	SMART	SM00433	topII5	coord: 1..325 e-value: 9.3E-37 score: 138.1
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 1..82 e-value: 1.4E-26 score: 95.0
IPR002288	DNA gyrase B subunit, C-terminal	PFAM	PF00986	DNA_gyraseB_C	coord: 262..321 e-value: 2.3E-27 score: 95.0
IPR006171	TOPRIM domain	PFAM	PF01751	Toprim	coord: 104..212 e-value: 3.5E-17 score: 62.5
IPR006171	TOPRIM domain	PROSITE	PS50880	TOPRIM	coord: 103..218 score: 17.746
IPR013506	DNA topoisomerase, type IIA, subunit B, domain 2	PFAM	PF00204	DNA_gyraseB	coord: 1..75 e-value: 8.4E-23 score: 80.7
IPR013759	DNA topoisomerase, type IIA, subunit B, C-terminal	GENE3D	3.40.50.670		coord: 83..333 e-value: 2.0E-102 score: 343.5
IPR018522	DNA topoisomerase, type IIA, conserved site	PROSITE	PS00177	TOPOISOMERASE_II	coord: 107..115
IPR013760	DNA topoisomerase, type IIA-like domain superfamily	SUPERFAMILY	56719	Type II DNA topoisomerase	coord: 79..329
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 1..76

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig9525	contig	P-canaliculata_contig9525:3894..11948 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig9525.23549.1	mRNA_P-canaliculata_contig9525.23549.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig9525 3894..11948 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig9525.23549.1 ID=prot_P-canaliculata_contig9525.23549.1|Name=mRNA_P-canaliculata_contig9525.23549.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=335bp
RQGLTAVISVKVPEPEFEGQTKNRLGNPEVRAIVDSVLNEELVKVFEWHP
KILGAIVDKAVSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDP
SESEIYIVEGDSAAGSAKQGRDRSTQAILPLRGKILNIEKCAPERIYQNA
ELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFF
RYQRALIEEGFVYIACPPLYKIKHGKKEKYVYTQEECDKAVSELSGSGSA
SSAGSSSLPPTVQLQRFKGLGEMMPDQLWETTMDPAKRILKLVTVEDATA
ADRVFSALMGDNVAPRKDFINQHSDNLKLGDLDF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000565	Topo_IIA_B
IPR001241	Topo_IIA
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR002288	DNA_gyrase_B_C
IPR006171	TOPRIM_domain
IPR013506	Topo_IIA_bsu_dom2
IPR013759	Topo_IIA_B_C
IPR018522	TopoIIA_CS
IPR013760	Topo_IIA-like_dom_sf
IPR020568	Ribosomal_S5_D2-typ_fold