prot_P-canaliculata_contig95047.23522.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig95047.23522.1
Unique Nameprot_P-canaliculata_contig95047.23522.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length122
Homology
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BLAST of mRNA_P-canaliculata_contig95047.23522.1 vs. uniprot
Match: A0A848UAR4_9GAMM (Uncharacterized protein n=1 Tax=Granulosicoccus sp. TaxID=1943584 RepID=A0A848UAR4_9GAMM)

HSP 1 Score: 161 bits (408), Expect = 5.120e-47
Identity = 77/121 (63.64%), Postives = 96/121 (79.34%), Query Frame = 0 
Query:    2 IWTLQHYPSPIDGSALCAVVSTPAIVTNGTIDTQVAVIISNSAVFLRTDATFDTTAAEMGYRIDAGIPIGFDHFLNELTAVVDDGYERLTNTLLAGETLRVTFAYSPQLSSAETHAIEFPL 122
            +W++ ++P+P+DGSALC+VVS P  V NGT++TQV +IIS+SAV LRTDATFD  A E G+R+DAG P+ FDHFLNELTAVVDD Y RL   +  G TL V+FAY PQLS+AETH +EF L
Sbjct:  134 LWSVTNFPNPVDGSALCSVVSRPVTVMNGTLETQVTLIISDSAVILRTDATFDDAAPETGFRVDAGFPVAFDHFLNELTAVVDDSYPRLIEAIENGSTLTVSFAYDPQLSTAETHVMEFSL 254
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig95047.23522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A848UAR4_9GAMM5.120e-4763.64Uncharacterized protein n=1 Tax=Granulosicoccus sp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig95047contigP-canaliculata_contig95047:342..707 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig95047.23522.1mRNA_P-canaliculata_contig95047.23522.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig95047 342..707 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig95047.23522.1 ID=prot_P-canaliculata_contig95047.23522.1|Name=mRNA_P-canaliculata_contig95047.23522.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=122bp
GIWTLQHYPSPIDGSALCAVVSTPAIVTNGTIDTQVAVIISNSAVFLRTD
ATFDTTAAEMGYRIDAGIPIGFDHFLNELTAVVDDGYERLTNTLLAGETL
RVTFAYSPQLSSAETHAIEFPL
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