prot_P-canaliculata_contig950.23519.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig950.23519.1
Unique Nameprot_P-canaliculata_contig950.23519.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length540
Homology
BLAST of mRNA_P-canaliculata_contig950.23519.1 vs. uniprot
Match: D7G2A1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2A1_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 1.880e-127
Identity = 294/604 (48.68%), Postives = 344/604 (56.95%), Query Frame = 0
Query:    7 KSKTTEGFLGLTVYRKK----SASGNNNKSSSKH------------------GMDSGKKGSGRAKRRPADGKAPGRRDPEAVARMEAEAKLAAERVQKE---GTDRSWLLPTNVDYYTDRAALLRELVKEMPADKRLSFQTRVANACTKEAVEGVLLDYATRLECLVLPHARSRDVDLHQVKKVRAKRVLFDGKEVPKKDPSEPPHAWHEELWATVEERIMEGLLESEPHAAEVA----------RTGSRGASERVGTVVPTGRGVEGGAAVVVDKARALANEEWKKMRAVAATGEVFKAMSRTGAGGDAYFALVALFCTADKLVVPVACQESPIEVDFLHQQR----------QRQKGRAKKGKDCSGGRG----VHVMVTVPSTFDIYLQ-GGQADERGS----------VQMKKRAXXXXXXXXXXXXXXXXXVGSRKKNPGEAAADASIALHLVRVRAVVEEEIWVMGRKSSGCSGRGAGLPSGDD-MPPPLQLLMEQAQEEQKNSAGLGSAADGEAGALPSRANNGLASQANATNTATTPP-----------LLALTRAERRIRVSLVPEPSVVSEMVRNFSRTLGVDVPSPEPPRVLG 538
            K+    GFL  T+YR K     A+G+ + S SK                   G   G++ SG   RRPADG+APGRRDP AVAR+EAEA   A+  ++E     D SW LP+NVDYY+  AALLRELVKEMPADKRLSFQTRVANA TKE++E VL DYA RLE LVLPHARSR++DL QVKK   KR  F G  +P       P  WHEELWAT+E R+ME +L                    ++  RG+++          G  G A  V DKARALA EEW K RAVA T EVFKAMSRTGAGGDAYFALVALFCTADKLVVPV CQESPI V+FL++            +R K R   GK    G+G    VHV+VTVPSTFDIYL+ GG A E                    XXXXXXXXX          +     G AAADAS ALHLVRV+AVVEEEIW +GR   G S         +D  PP L+ L++  +  ++ SAG G   D    A                                  LLALTR ERR+ V++VPEPS VSEMVR+FSR +GVDVPSP+PPRVLG
Sbjct:   56 KTNNKGGFLSRTLYRPKPSAAGANGSAHSSGSKPPNIPPKSGAGGNAKNGGWGGVGGRRSSGGV-RRPADGRAPGRRDPTAVARLEAEAAARAKAEKEELGGRVDLSWQLPSNVDYYSAPAALLRELVKEMPADKRLSFQTRVANARTKESIESVLEDYAERLESLVLPHARSREMDLQQVKKT-GKRS-FSGGALPTS-----PTTWHEELWATLEARVMESVLSGXXXXXXXXXXXXXXXXXXKSNGRGSTDEA-------VGGRGAAPAVGDKARALALEEWNKARAVATTSEVFKAMSRTGAGGDAYFALVALFCTADKLVVPVHCQESPITVEFLNRSSAAAGGKGARGRRSKERLSFGKKKGAGKGKGDDVHVLVTVPSTFDIYLRDGGTAGEGADGXXXXXXXXXXXXXXXRXXXXXXXXXKIHRKSSTSSNHSNGDGAAAADASNALHLVRVKAVVEEEIWGLGRAGGGMSXXXXXXXXXEDGTPPTLRFLLDPERHNRRTSAGSGGWPDAPPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLALTRTERRMAVTVVPEPSAVSEMVRSFSRKIGVDVPSPQPPRVLG 644          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig950.23519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2A1_ECTSI1.880e-12748.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig950contigP-canaliculata_contig950:22317..25168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig950.23519.1mRNA_P-canaliculata_contig950.23519.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig950 22317..25168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig950.23519.1 ID=prot_P-canaliculata_contig950.23519.1|Name=mRNA_P-canaliculata_contig950.23519.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=540bp
APPSPVKSKTTEGFLGLTVYRKKSASGNNNKSSSKHGMDSGKKGSGRAKR
RPADGKAPGRRDPEAVARMEAEAKLAAERVQKEGTDRSWLLPTNVDYYTD
RAALLRELVKEMPADKRLSFQTRVANACTKEAVEGVLLDYATRLECLVLP
HARSRDVDLHQVKKVRAKRVLFDGKEVPKKDPSEPPHAWHEELWATVEER
IMEGLLESEPHAAEVARTGSRGASERVGTVVPTGRGVEGGAAVVVDKARA
LANEEWKKMRAVAATGEVFKAMSRTGAGGDAYFALVALFCTADKLVVPVA
CQESPIEVDFLHQQRQRQKGRAKKGKDCSGGRGVHVMVTVPSTFDIYLQG
GQADERGSVQMKKRASAGGGGSVLGGASSSSSVGSRKKNPGEAAADASIA
LHLVRVRAVVEEEIWVMGRKSSGCSGRGAGLPSGDDMPPPLQLLMEQAQE
EQKNSAGLGSAADGEAGALPSRANNGLASQANATNTATTPPLLALTRAER
RIRVSLVPEPSVVSEMVRNFSRTLGVDVPSPEPPRVLGM*
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