prot_P-canaliculata_contig9486.23500.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9486.23500.1
Unique Nameprot_P-canaliculata_contig9486.23500.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length329
Homology
BLAST of mRNA_P-canaliculata_contig9486.23500.1 vs. uniprot
Match: D7G4S1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4S1_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 1.850e-113
Identity = 182/334 (54.49%), Postives = 243/334 (72.75%), Query Frame = 0
Query:    5 NLISG-IGWFILGVKAQGFLVPCVRSDRMFSVPRRTSVGCRGCTRSFSTQWMSRAVADSRSLRVSVRET----------AVNATLGPTQEGHAVLDALIEQFASPNNGNVTATVDEYLDLCDHAFLTHLRSRIASAGSESSAGMKLSRVEEEINMAMERRLAAADSNLRRVLELAPDIKGMEGKLRILFREGKVDMAFMVMINMNLQRAKEVEGAENAVKILTHMTTFIMGLQNEGLNPELRLLRLLLRTDCDGVRKSMLQEQLQVTHYDVFVKPPMDKNRVQPDHLRAAITDMVSQLEELGQAADAGLTDFLRGLQVEIDDVLKSNQRPGPFR 327
            N +S  +GW +   +A+ F V        F  P+ T+   R    S      ++ + D+ +LR   R            AV +++G   E H+VLDALI+QF SP +GNVTATV+EYLDLCDHA LTHLR RI +  ++S     L  VEEEINMAM+RRLAAADSNLR+VL+LAPDIK MEG++R LFREGKV+MAFMVMI+MNLQRAK+ EGA++AV +LTH+TTFIM +Q+E LNPE +LLR LLRTDCDGVRKS+LQ++LQ+ + DVF++ P DK++VQP  L+ AITDM++Q+E++GQA D G+TD L+GLQVE++ V+  ++RPGP++
Sbjct:    6 NYVSATVGWLLARRQAEAFSVVG------FQKPQATACRTRALASSVPASSPTQRILDAAALRGPSRGLLPMHMLAGGDAVQSSVGTKSEEHSVLDALIDQFTSPKSGNVTATVEEYLDLCDHALLTHLRGRIEAEEAQSPEATALKHVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGRIRTLFREGKVNMAFMVMISMNLQRAKDAEGADHAVMLLTHLTTFIMMIQDERLNPEEKLLRTLLRTDCDGVRKSILQDRLQLPNNDVFLERPPDKDKVQPHLLQQAITDMITQVEDIGQAIDVGMTDSLKGLQVEVNTVVAGSKRPGPYK 333          
BLAST of mRNA_P-canaliculata_contig9486.23500.1 vs. uniprot
Match: A0A835YR16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR16_9STRA)

HSP 1 Score: 172 bits (436), Expect = 5.710e-49
Identity = 103/212 (48.58%), Postives = 140/212 (66.04%), Query Frame = 0
Query:  113 LCDHAFLTHLRSRIASAGSESSAGMKLSRVEEEINMAMERRLAAADSNLRRVLELAPDIKGMEGKLRILFREGKVDMAFMVMINMNLQRAKEV-EGAENAVKILTHMTTFIMGLQNEGLNPELRLLRLLLRTDCDG---VRKSMLQEQLQVTHYDVFVKPPMDKNRVQPDHLRAAITDM---VSQLEELGQAADAGLTDFLRGLQVEIDDVL 317
            +CD+ FL +L  RI  AG +S  G KLS V +EIN+AM+RRL AAD+NLR VL  APD+K ME  LR LFR G+ DMAFMV++NMNL +A+E   GAE AV +LTH+ T IM +Q+  + PE+RLLR+L+R   D     R+ +L+EQL ++         +    V PD LR AI ++    +Q+E++ +  D GLT+ LRGL  EID+VL
Sbjct:    1 MCDYGFLMYLNGRIGEAGPDSEEGTKLSAVAQEINVAMQRRLVAADANLRAVLANAPDLKKMEADLRRLFRTGQADMAFMVVLNMNLAQAREAGPGAEGAVAVLTHLNTAIMEMQDTRVAPEVRLLRMLMRASDDDNAEKRRDLLKEQLDLSGGGGADSSGL----VTPDQLRDAIRELQEQATQIEKVSKEYDTGLTEKLRGLLREIDEVL 208          
BLAST of mRNA_P-canaliculata_contig9486.23500.1 vs. uniprot
Match: A0A7S1XEX3_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEX3_9RHOD)

HSP 1 Score: 76.3 bits (186), Expect = 8.700e-12
Identity = 72/225 (32.00%), Postives = 107/225 (47.56%), Query Frame = 0
Query:   30 DRMFSVPRRTSVGCRGCTRSFSTQWMSRAVADSRSLRVSVRETAVNATLGPTQEGHAVLDALIEQFASPNNGNVTATVDEYLDLCDHAFLTHLRSRIASAGSESSAGMKLSRVEEEINMAMERRLAAADSNLRRVLEL-APDIKGMEGKLRILFREGKVDMAFMVMINMNLQRAKEVEGAENAVKILTHMTTFIMGLQNEGLNPELRLLRLLLRTDCDGVRKSML 253
            DR F+     + G +      +    + AV   R L   VRE+      G T E      AL+ +     +G V + V       D AFL HL   +     E     KL +V+ EI   M  ++  A S +R +L+  AP+   M+ KL   FR G+VD AF++++  N+ +A++  GAE AV +LT +    M L +    PEL L+R LLRTD    RK++L
Sbjct:   80 DRFFAYIDEKAAGVKDLEEKQNLYAFAEAV---RHLVGRVRESRTGNGEGNTPENSYA--ALLREIVQARDG-VESAVSRLYGRVDQAFLEHLEGALEGTSGEERT--KLEQVKAEILRRMNEKMEKAASVMRSILQAGAPE--AMDTKLVEHFRFGEVDDAFLLLLEGNIDQARKA-GAEPAVAVLTKLRMKAMELGDTNAEPELVLVRKLLRTDEAAARKALL 293          
BLAST of mRNA_P-canaliculata_contig9486.23500.1 vs. uniprot
Match: A0A2V3IXN8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXN8_9FLOR)

HSP 1 Score: 71.2 bits (173), Expect = 4.470e-10
Identity = 55/177 (31.07%), Postives = 90/177 (50.85%), Query Frame = 0
Query:   86 AVLDALIEQFASP----NNGNVTATVDEYLDLCDHAFLTHLRSRIASAGSESSAGMKLSRVEEEINMAMERRLAAADSNLRRVLELAPDIKGMEGKLRILFREGKVDMAFMVMINMNLQRAKEVEGAENAVKILTHMTTFIMGLQNEGLNPELRLLRLLLRTDCDGVRKSMLQEQLQ 258
            A  D LI++  S     N   +   V+      D   L  +  RI+  GS+S A + L  V   I++ M  R+ A   ++R VL  A D   M  ++  L R+GK+D AF++++  NL +AK+   A+ AV++L+        +++  L PE+RL+R LLRT+    R  ML +  +
Sbjct:  155 ASYDELIDEIKSARDVSNPAALKTAVEASYQRIDLRLLERINERISFKGSDSEALIDLRNV---ISVVMNERIQAGTESVRTVLA-AGDAIAMRKQIDTLARKGKLDDAFILLLQANLDQAKKAN-AQQAVEVLSLALNHAQSVKDVQLEPEVRLIRALLRTEDSEARTKMLMDSFK 326          
BLAST of mRNA_P-canaliculata_contig9486.23500.1 vs. uniprot
Match: A0A7S1EQS5_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQS5_9RHOD)

HSP 1 Score: 68.2 bits (165), Expect = 2.690e-9
Identity = 57/192 (29.69%), Postives = 100/192 (52.08%), Query Frame = 0
Query:  127 ASAGSESSAGMKLSRVEEEINMAMERRLAAADSNLRRVLELAPDIKGMEGKLRILFREGKVDMAFMVMINMNLQRAKEVEGAENAVKILTHMTTFIMGLQNEGLNPELRLLRLLLRTDCDGVRKSMLQEQLQVTHYDVFVKPPMDKNRVQPDHLRAAITDMVSQLEELGQAADAGLTDFLRGLQVEIDDVLK 318
            AS+G E++      ++ E +  AM  R+ +A   LR  L   P    M  KL    + G++D AF++++  NL +AK+ +  +NAVKILT +    M L+++ + PE+ L+R LLRT+ +  RKS+L++ L V    V +      +    D  +  +  M   +E+ G   D+ L + +  +  E +DV +
Sbjct:   70 ASSGDETAE-----KISEIVQKAMADRMQSAADRLRVCLTAGPP-DAMVQKLYDFVQAGELDDAFLLLLAGNLDQAKKAQN-DNAVKILTILQRKTMELRDQQVEPEVALVRQLLRTETEDARKSILRKALAVKK-KVMLSDGSQSSGTTVDG-KKLVAAMRKLIEQFGNV-DSTLVERVSMIGTEAEDVAR 251          
BLAST of mRNA_P-canaliculata_contig9486.23500.1 vs. uniprot
Match: A0A7R9UVW9_DIALT (Hypothetical protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UVW9_DIALT)

HSP 1 Score: 65.5 bits (158), Expect = 2.630e-8
Identity = 65/274 (23.72%), Postives = 129/274 (47.08%), Query Frame = 0
Query:   64 SLRVSVRETAVN-ATLGPTQEGHAVLD---------ALIEQFASPNNGNVTAT--VDEYLDLCDHAFLTHLRSRIASAGSESSAGMKLSRVEEEINMAMERRLAAADSNLRRVLELAPDIKGMEGKLRILFREGKVDMAFMVMINMNLQRAKEVEGAENAVKILTHMTTFIMGLQNEGLNPELRLLRLLLRTDCDGVRKSMLQEQLQVTHYDVFV------KPPMDKNR-VQPDHLRAAITDMVSQLEELGQAADAGLTDFLRGLQVEIDDVLK 318
            S R  VR+ A+     G +++G  VLD         AL+E     ++ N++    V    +  D+ F+  L +++ +A  E      L RV+E +N  M  R+  A   L+++L   P   GM   +    + G ++ + ++++  N+++A E  GA+ A ++++ + T I    ++ + PE+RLLR LLR +    R+ +L++++   +    +       PP  K   V+   L AA+  + +Q   + +    GL   +  +  E + V +
Sbjct:   17 SARTRVRQHAMQMGDAGISRQGPPVLDEAAKERGYNALLEMMLRADSFNISQADMVKASYEKIDYTFMQKLGAQVEAAEGEGKDS--LVRVQELVNKEMSERMGRAAEALKKLLGAGPS--GMFRLVPDYMQRGLLEESLLLLLEANIRQASEA-GAKPAAELMSRLMTQIRLEIDKAVEPEIRLLRELLRIESADARRELLRQKIAPKNVPAILIAGAREAPPASKEPDVKVRKLAAALGKLKAQFGNVDEELQGGLGARIDMIAKEAEAVAR 285          
BLAST of mRNA_P-canaliculata_contig9486.23500.1 vs. uniprot
Match: K0TLD5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLD5_THAOC)

HSP 1 Score: 57.4 bits (137), Expect = 1.650e-5
Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = 0
Query:  101 GNVTATVD-EYLDLCDHAFLTHLRSRIASAGSESSAGMKLSRVEEEINMAMERRLAAADSNLRRVLELAPDIKGMEGKLRILFREGKVDMAFMVMINMNLQRAKEVEGAENAVKILTHMTTFIMGLQN-EGLNPELRLLRLLLRTDCDGVRKSMLQE 255
            G+  ATV   Y D  D  F+  L  R  +   +S A +    VE++      +R+  A  NLR VL     ++ MEG +  L +EGK+D AF++++  N  +A+   GA    +++T +    M  ++ +  + E++LLR LLR D    R+ +L E
Sbjct:  192 GDTPATVVFAYYDQFDAQFIKVLNERAMNGDGDSQALLDALAVEQQ------KRVNDATENLRDVLSKGDPMR-MEGAIVRLAKEGKIDEAFLLLLEANADQARAA-GATGPAELMTKLRERAMNEKDKQSASKEIKLLRQLLREDDSSKREDLLTE 340          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9486.23500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G4S1_ECTSI1.850e-11354.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YR16_9STRA5.710e-4948.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1XEX3_9RHOD8.700e-1232.00Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2V3IXN8_9FLOR4.470e-1031.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1EQS5_9RHOD2.690e-929.69Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7R9UVW9_DIALT2.630e-823.72Hypothetical protein n=3 Tax=Diacronema lutheri Ta... [more]
K0TLD5_THAOC1.650e-530.57Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..328
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9486contigP-canaliculata_contig9486:2966..7464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9486.23500.1mRNA_P-canaliculata_contig9486.23500.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9486 2910..7542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9486.23500.1 ID=prot_P-canaliculata_contig9486.23500.1|Name=mRNA_P-canaliculata_contig9486.23500.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=329bp
MPYPNLISGIGWFILGVKAQGFLVPCVRSDRMFSVPRRTSVGCRGCTRSF
STQWMSRAVADSRSLRVSVRETAVNATLGPTQEGHAVLDALIEQFASPNN
GNVTATVDEYLDLCDHAFLTHLRSRIASAGSESSAGMKLSRVEEEINMAM
ERRLAAADSNLRRVLELAPDIKGMEGKLRILFREGKVDMAFMVMINMNLQ
RAKEVEGAENAVKILTHMTTFIMGLQNEGLNPELRLLRLLLRTDCDGVRK
SMLQEQLQVTHYDVFVKPPMDKNRVQPDHLRAAITDMVSQLEELGQAADA
GLTDFLRGLQVEIDDVLKSNQRPGPFRH*
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