prot_P-canaliculata_contig94855.23499.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig94855.23499.1
Unique Nameprot_P-canaliculata_contig94855.23499.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length104
Homology
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BLAST of mRNA_P-canaliculata_contig94855.23499.1 vs. uniprot
Match: A0A517MRR3_9BACT (Uncharacterized protein n=1 Tax=Adhaeretor mobilis TaxID=1930276 RepID=A0A517MRR3_9BACT)

HSP 1 Score: 109 bits (273), Expect = 6.170e-26
Identity = 58/105 (55.24%), Postives = 77/105 (73.33%), Query Frame = 0 
Query:    1 PGPFARVFTGNFDGNIESARNRTA-TVTQFSTAVANTAAHELGHTYGLFHHFVYSNDGIAPRFDNLNNTGGLQNQHLIGTGATGSTEEIREAGPRGLSPFSQVML 104
            PG  +RVFTGNF+G +E A N    ++ + ST++A TAAHE GH+ GLFHH+ YS +GI P   N +NTGGLQNQH++ TG+TG +E  RE+  R LSPFS+V+L
Sbjct:  159 PGGVSRVFTGNFNGALEPAFNSLQESIDEISTSLAGTAAHEFGHSLGLFHHYTYSAEGIVP--SNSSNTGGLQNQHILATGSTGVSEAERES-IRTLSPFSRVIL 260
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BLAST of mRNA_P-canaliculata_contig94855.23499.1 vs. uniprot
Match: A0A1V5GVY7_9BACT (PPC domain-containing protein n=1 Tax=Lentisphaerae bacterium ADurb.BinA184 TaxID=1852901 RepID=A0A1V5GVY7_9BACT)

HSP 1 Score: 85.5 bits (210), Expect = 2.620e-17
Identity = 46/89 (51.69%), Postives = 57/89 (64.04%), Query Frame = 0 
Query:    2 GPFARVFTGNFDGNIESARNRTATVTQFSTAVANTAAHELGHTYGLFHHFVYSNDGIAPRFDNLNNTGGLQNQHLIGTGATGSTEEIRE 90
            G  A V   NFD  IE A  R+  + + +TA+A TAAHELGHT+GL HH  YS+ GI P   N  +TGGLQNQ+++ TG TG  E  RE
Sbjct:  147 GQTANVAPANFDFIIEVAEPRSTQMAELATALAGTAAHELGHTFGLLHHDAYSDPGITPA--NYGSTGGLQNQYIMATGPTGLDETGRE 233
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig94855.23499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A517MRR3_9BACT6.170e-2655.24Uncharacterized protein n=1 Tax=Adhaeretor mobilis... [more]
A0A1V5GVY7_9BACT2.620e-1751.69PPC domain-containing protein n=1 Tax=Lentisphaera... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024079Metallopeptidase, catalytic domain superfamilyGENE3D3.40.390.10coord: 3..84
e-value: 2.5E-5
score: 26.1
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 17..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig94855contigP-canaliculata_contig94855:78..389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig94855.23499.1mRNA_P-canaliculata_contig94855.23499.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig94855 78..389 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig94855.23499.1 ID=prot_P-canaliculata_contig94855.23499.1|Name=mRNA_P-canaliculata_contig94855.23499.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=104bp
PGPFARVFTGNFDGNIESARNRTATVTQFSTAVANTAAHELGHTYGLFHH
FVYSNDGIAPRFDNLNNTGGLQNQHLIGTGATGSTEEIREAGPRGLSPFS
QVML
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024079MetalloPept_cat_dom_sf