prot_P-canaliculata_contig9475.23491.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9475.23491.1
Unique Nameprot_P-canaliculata_contig9475.23491.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length302
Homology
BLAST of mRNA_P-canaliculata_contig9475.23491.1 vs. uniprot
Match: A0A6H5LAX6_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAX6_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 2.130e-58
Identity = 119/288 (41.32%), Postives = 170/288 (59.03%), Query Frame = 0
Query:   15 VTLTTIGYGDLNARTPATKLFTCLYILVGAAMIGALLARLVEMLLDEQEEALMDMIKNR---------------RPHKQRWGGNREEFLAGPWGVLNRTFHSLKDI---NPYHVKVWSGIAWFVVLTMVGALIFKFTMDLSFVDAIYLTVVSASTVGYGDLSPNTTTTKVFAIFYLPFSTLLLAKVISDYAEMTVEANNRKKHEQILLKCMSQDEFKEMDENEDGRVDKWEYLVRQLMRQGKLSQDEIDKVWKHFHALDTDDSGFLEFNEVSGERDANNDGIIDIREI 284
            VTLTT+GYGDL+A  P TKLF C YIL+G AM+ A L++LVE+LLD+Q    + MI+                    K +WG        G       T     DI   N  +V+V  G+ +FV+L  VG  +F     +S +DA YLTVVS+STVGYGD  P++T T++FAIF+LP STLLL KVISDY EM      +++  ++LL  ++  E+  MD + D RV   E++V  L++Q K++Q++I+++   F ALD D +GF+  +E+  ERD + DG I   E+
Sbjct:  167 VTLTTVGYGDLSAHKPVTKLFACFYILIGVAMVAAFLSKLVELLLDKQAGRRLSMIRGMVALVVAQAMGVDYPDTAMKTQWGSGATN--GGTPAAQQDTAGDNDDIALVNSINVEVGLGVFYFVLLVGVGTTVFMVYGHMSVIDAFYLTVVSSSTVGYGDYFPSSTGTRLFAIFFLPLSTLLLGKVISDYTEMQANKRVKQRQTRLLLATVTAREYSAMDADNDNRVSLMEFMVHTLIKQEKVTQEDIEEIHTRFTALDKDHNGFVTRDEIGEERDKDGDGFIGADEL 452          
BLAST of mRNA_P-canaliculata_contig9475.23491.1 vs. uniprot
Match: A0A2V3ITP7_9FLOR (Two pore potassium channel c n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITP7_9FLOR)

HSP 1 Score: 139 bits (351), Expect = 2.970e-35
Identity = 86/258 (33.33%), Postives = 144/258 (55.81%), Query Frame = 0
Query:   15 VTLTTIGYGDLNARTPATKLFTCLYILVGAAMIGALLARLVEMLLDEQEEALMDMIKNRRPHKQRWGGNREEF----LAGPWGVLNRTFHSLKDINPYHVKVWSGIAWFVVLTMVGALIFKFTMDLSFVDAIYLTVVSASTVGYGDLSPNTTTTKVFAIFYLPFSTLLLAKVISDYAEMTVEANNRKKHEQILLKCMSQDEFKEMDENEDGRVDKWEYLVRQLMRQGKLSQDEIDKVWKHFHALDTDDSGFLEFNEVS 268
            VT TT+GYGD+     ++KLF   Y++V  A+I A+L  +V ML+D QEE L++ ++         GG+ +      +    G+++ +     DI    V     I+  +V+  +G ++F     LS ++A+Y+TV+SASTVG+GDL P    +K+    +L FST+  AKV++D A M  +   +    +++   M       MD++ D RVDK E+L + L+R GK+ +DE+ ++ K F  LD D+SG++   E +
Sbjct:  112 VTTTTVGYGDITPTRGSSKLFVIYYVVVSIAIISAVLGHIVGMLIDRQEELLINAME---------GGDEDSDSDNEIQARKGLVDES-----DIRQLVVS----ISTLLVILAMGVVVFMRLEKLSLLNALYVTVISASTVGFGDLQPTRNVSKMIMTIWLCFSTICAAKVVADVAAMVAKMKQKAVQRRLMSARMDIRTLVGMDKDRDNRVDKTEFLAQMLIRSGKVEEDEVQELLKRFDELDVDNSGYISPEECA 351          
BLAST of mRNA_P-canaliculata_contig9475.23491.1 vs. uniprot
Match: R7QMR7_CHOCR (EF-hand domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMR7_CHOCR)

HSP 1 Score: 136 bits (343), Expect = 6.940e-34
Identity = 83/262 (31.68%), Postives = 140/262 (53.44%), Query Frame = 0
Query:    9 CFLSTQVTLTTIGYGDLNARTPATKLFTCLYILVGAAMIGALLARLVEMLLDEQEEALMDMIKNRRPH------KQRWGGNREEFLAGPWGVLNRTFHSLK--DINPYHVKVWSGIAWFVVLTMVGALIFKFTMDLSFVDAIYLTVVSASTVGYGDLSPNTTTTKVFAIFYLPFSTLLLAKVISDYAEMTVEANNRKKHEQILLKCMSQDEFKEMDENEDGRVDKWEYLVRQLMRQGKLSQDEIDKVWKHFHALDTDDSGFL 262
            CF    VT TT+GYGD+  ++   KL+   Y++V   ++  +L+ L+ +LLD QEE L+  I   R        +   G    E       +  R  ++ K  DI+ Y   +   + +  +   VG L+F    +L+ +DA Y T++SASTVG+GD  P   +TKV    +L FST+ + K+++D+ +  V+A  R    ++L   M+ +  + +D ++DG VDK E+L + L+R GK+ Q ++D +   F  LD + +G L
Sbjct:  107 CFYFCIVTTTTVGYGDITPKSSVAKLYVIYYVIVSIGLVSTMLSYLIGLLLDRQEEVLLAAIVRDRDEDPVSEMRTADGSVDVEEPPSTASINERIMNATKSLDISDY-CGLGFAVGFLGLALAVGMLVFMGLENLAPIDAAYATIISASTVGFGDYEPTRNSTKVIMTVWLCFSTIAVGKLVADFTDANVKAKQRDVSRRLLTATMNVESIRNLDMDKDGSVDKCEFLTQMLVRSGKVEQKDLDAILLRFDQLDKNSNGEL 367          
BLAST of mRNA_P-canaliculata_contig9475.23491.1 vs. uniprot
Match: UPI001C4E9B3D (two-pore potassium channel 5-like isoform X1 n=2 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4E9B3D)

HSP 1 Score: 134 bits (338), Expect = 6.140e-33
Identity = 84/253 (33.20%), Postives = 134/253 (52.96%), Query Frame = 0
Query:   15 VTLTTIGYGDLNARTPATKLFTCLYILVGAAMIGALLARLVEMLLDEQEEALMDMIKNRRPHKQRWGGNREEFLAGPWGVLNRTFHSLKDINPYHVKVWSGIAWFVVLTMVGALIFKFTMDLSFVDAIYLTVVSASTVGYGDLSPNTTTTKVFAIFYLPFSTLLLAKVISDYAEMTVEANNRKKHEQILLKCMSQDEFKEMDENEDGRVDKWEYLVRQLMRQGKLSQDEIDKVWKHFHALDTDDSGFLEFNEV 267
            VT+ TIGYGD+   TPA KLF C+++LVG   IG LL+  V  +LD QE  ++  I             R    AG +   N  F   K      +KV   +   V+    GA+IF F   L  VD++YL+V+S +TVGYGD +  T   ++FA  +L FSTL +A+     AE  ++  +R+    +L + ++ ++F   D N +G + K +Y++ +L   GK+ + +I ++  HF  LD  +SG +   ++
Sbjct:  161 VTMCTIGYGDIAPLTPAAKLFACIFVLVGFGFIGILLSGTVNYVLDLQENMILTSI-------------RAGTGAGGFSAKNYIFDLEKGRMRIRMKVGLALGVVVLCIGTGAMIFYFVEHLDLVDSVYLSVMSVTTVGYGDRAFETLPGRLFASLWLLFSTLAVARAFLYLAEARIDKRHRRITNWVLQRGITVEDFLAADVNNNGFISKSDYVIYKLKEMGKIGEKDISQICTHFRKLDRHNSGKITLPDI 400          
BLAST of mRNA_P-canaliculata_contig9475.23491.1 vs. uniprot
Match: A0A7S1XFF2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFF2_9RHOD)

HSP 1 Score: 132 bits (332), Expect = 1.120e-32
Identity = 79/253 (31.23%), Postives = 135/253 (53.36%), Query Frame = 0
Query:   15 VTLTTIGYGDLNARTPATKLFTCLYILVGAAMIGALLARLVEMLLDEQEEALMDMIKNRRPHKQRWGGNREEFLAGPWGVLNRTFHSLKDINPYHVKVWSGIAWFVVLTMVGALIFKFTMDLSFVDAIYLTVVSASTVGYGDLSPNTTTTKVFAIFYLPFSTLLLAKVISDYAEMTVEANNRKKHEQILLKCMSQDEFKEMDENEDGRVDKWEYLVRQLMRQGKLSQDEIDKVWKHFHALDTDDSGFLEFNEV 267
            V  TT+GYGDL   TP +KLFT +Y++V   +I A LA L E ++D QE  L++ + N                  P G ++             ++V +    F ++ +VG+ I      LS++D+IY TVV+ASTVG+GD+ PN+ +T++FA  ++  ST+ LA  I   + +      R    Q +   +S+ +++ +D ++DG++ + EYL   L++ G + Q  ID++ + FH  D D  G ++ +E 
Sbjct:   90 VVATTVGYGDLTPSTPVSKLFTVVYVVVAVMIILAALASLFEQVMDSQERLLVNRLLN------------------PEGCVDDLAGCQSMTASEKMEVLTSFGTFFIIGLVGSCILGHLEHLSWLDSIYFTVVTASTVGFGDMEPNSESTRLFASIWILISTISLAHAIGTLSSVRAAVRQRVLAYQTIHTSLSRGDYRALDRDQDGQISQIEYLTGMLVKLGNVDQILIDEILERFHDQDRDRDGEIDMDEA 324          
BLAST of mRNA_P-canaliculata_contig9475.23491.1 vs. uniprot
Match: A0A2I4DV14_JUGRE (two-pore potassium channel 5 n=4 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4DV14_JUGRE)

HSP 1 Score: 133 bits (334), Expect = 1.410e-32
Identity = 82/246 (33.33%), Postives = 139/246 (56.50%), Query Frame = 0
Query:   15 VTLTTIGYGDLNARTPATKLFTCLYILVGAAMIGALLARLVEMLLDEQEEALMDMIKNRRPHKQRWGGNREEFLAGPWGVLNRTFHSLKDINPYHVKVWSGIAWFVVLTMVGALIFKFTMDLSFVDAIYLTVVSASTVGYGDLSPNTTTTKVFAIFYLPFSTLLLAKVISDYAEMTVEANNRKKHEQILLKCMSQDEFKEMDENEDGRVDKWEYLVRQLMRQGKLSQDEIDKVWKHFHALDTDDSG 260
            VT+ TIGYGD+  RT ATK+F C+++LVG   I  LL+ +V  +LD QE  ++  I+  RP     G +  +++          F + K      +KV   +   V+   +G L+  F  DL ++DA+YL+V+S +TVGYGD + NT   ++FA  +L FSTL++A+     AE  ++  +R+    +L + ++ ++    D N +G + K EY++ +L   GK+ + +I ++  HF  LD ++SG
Sbjct:  132 VTMCTIGYGDIAPRTTATKVFACVFVLVGFGFIDILLSGVVNYVLDLQENMILAGIQMGRPQH---GFSARDYI----------FDAAKGRMRIRLKVGLALGVVVLCIGMGTLVLYFVEDLDWIDAVYLSVMSVTTVGYGDRAFNTLPGRLFASIWLLFSTLMVARAFLYLAEARIDKRHRRIASWVLQRDITVEDLLAADINNNGFISKSEYVIYKLKEMGKIGEKDILQICDHFSKLDPNNSG 364          
BLAST of mRNA_P-canaliculata_contig9475.23491.1 vs. uniprot
Match: UPI001CC5E46A (two-pore potassium channel 5-like n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC5E46A)

HSP 1 Score: 133 bits (335), Expect = 2.010e-32
Identity = 83/253 (32.81%), Postives = 134/253 (52.96%), Query Frame = 0
Query:   15 VTLTTIGYGDLNARTPATKLFTCLYILVGAAMIGALLARLVEMLLDEQEEALMDMIKNRRPHKQRWGGNREEFLAGPWGVLNRTFHSLKDINPYHVKVWSGIAWFVVLTMVGALIFKFTMDLSFVDAIYLTVVSASTVGYGDLSPNTTTTKVFAIFYLPFSTLLLAKVISDYAEMTVEANNRKKHEQILLKCMSQDEFKEMDENEDGRVDKWEYLVRQLMRQGKLSQDEIDKVWKHFHALDTDDSGFLEFNEV 267
            VT+ TIGYGD+   TPATKLF C ++LVG   IG LL+ +V  ++D QE  ++D I             R    AG +   N  F + K      +         V+    G +IF F   L FVD+IYL+V+S +TVGYGD +  T + ++FA  +L FSTL +A+     AE  ++  +R+    +L + ++ ++F   D N  G + K +Y++ +L   GK+ + +I ++   F  LD + SG ++  ++
Sbjct:  173 VTMCTIGYGDIAPLTPATKLFACAFVLVGFGFIGILLSGMVNYVVDLQENMILDSI-------------RASTGAGGFSAKNYIFDAEKGRMRIRMXXXXXXGVVVLCIGTGTMIFYFVEHLGFVDSIYLSVMSVTTVGYGDKAFETLSGRIFACLWLLFSTLAVARAFLYLAEARIDKRHRRITNWVLQRSITVEDFLAADVNNHGFISKSDYVIYKLKEMGKIGEKDILQICTQFTKLDRNKSGKIKLPDI 412          
BLAST of mRNA_P-canaliculata_contig9475.23491.1 vs. uniprot
Match: A0A5C7I2R0_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7I2R0_9ROSI)

HSP 1 Score: 131 bits (329), Expect = 9.660e-32
Identity = 84/257 (32.68%), Postives = 139/257 (54.09%), Query Frame = 0
Query:   15 VTLTTIGYGDLNARTPATKLFTCLYILVGAAMIGALLARLVEMLLDEQEEALMDMIKNRRPHKQRWGGNREEFLAGPWGVLNRTFHSLKDINPYHVKVWSGIAWFVVLTMVGALIFKFTMDLSFVDAIYLTVVSASTVGYGDLSPNTTTTKVFAIFYLPFSTLLLAKVISDYAEMTVEANNRKKHEQILLKCMSQDEFKEMDENEDGRVDKWEYLVRQLMRQGKLSQDEIDKVWKHFHALDTDDSGFLEFNEVSGER 271
            VT+ TIGYGD+   TPATK+F C+++LVG   I  LL+ +V  +LD QE  ++  IK  +  K++  G         +   N  F   K      +KV   +   V+    GALI  F  DL ++D+IYL+V+S +TVGYGD +  T   ++FA  +L FSTL++A+     AE  ++  +R+    +L + ++ ++    D N  G + K EY++ +L   GK+ + +I ++   F  LD ++SG +   ++   R
Sbjct:  143 VTMCTIGYGDIAPSTPATKIFACVFVLVGFGFIDILLSGVVNYVLDLQENMILTGIKMGKVSKEKESG---------FSARNYIFDMAKGRMRIRLKVGLALGVVVLSIGFGALILFFVEDLDWLDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIANWVLHRDITVEDLLAADINNHGFISKSEYVIYKLKEMGKVGEKDILQICNQFSKLDPNNSGKITLPDLMENR 390          
BLAST of mRNA_P-canaliculata_contig9475.23491.1 vs. uniprot
Match: W9QYF4_9ROSA (Putative calcium-activated outward-rectifying potassium channel 5 n=1 Tax=Morus notabilis TaxID=981085 RepID=W9QYF4_9ROSA)

HSP 1 Score: 129 bits (323), Expect = 5.620e-31
Identity = 81/247 (32.79%), Postives = 138/247 (55.87%), Query Frame = 0
Query:   15 VTLTTIGYGDLNARTPATKLFTCLYILVGAAMIGALLARLVEMLLDEQEEALMD-MIKNRRPHKQRWGGNREEFLAGPWGVLNRTFHSLKDINPYHVKVWSGIAWFVVLTMVGALIFKFTMDLSFVDAIYLTVVSASTVGYGDLSPNTTTTKVFAIFYLPFSTLLLAKVISDYAEMTVEANNRKKHEQILLKCMSQDEFKEMDENEDGRVDKWEYLVRQLMRQGKLSQDEIDKVWKHFHALDTDDSG 260
            VT+ TIGYGD+  RTP+TKLF CL++LVG   I  LL+ +V  +LD QE  +++ M  ++  H    G +  +F+              K      +KV   +   V+   VGAL  +F  DL ++D++YL+V+S +TVGYGD +  T   ++FA+ +L  STL +A+     AE  V+  +R+  + +L + ++ ++    D N +G + K EY++ +L   G++ + +I ++   F  LD ++SG
Sbjct:  120 VTMCTIGYGDIAPRTPSTKLFACLFVLVGFGFIDILLSGVVNYVLDLQENMILNGMHMDQHHHNHHQGFSAWDFIIDV----------AKGRMRIRLKVGLALGVVVLCIGVGALFLRFAEDLDWIDSVYLSVMSVTTVGYGDRAFKTLNGRIFAVVWLLLSTLAVARAFLYLAEARVDKRHRRIAKWVLHRDITVEDLIAADINNNGFISKSEYVIYKLKEMGRIGEKDILEICNQFCRLDPNNSG 356          
BLAST of mRNA_P-canaliculata_contig9475.23491.1 vs. uniprot
Match: A0A2R6P1L7_ACTCC (Two-pore potassium channel like n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6P1L7_ACTCC)

HSP 1 Score: 127 bits (319), Expect = 3.080e-30
Identity = 83/246 (33.74%), Postives = 135/246 (54.88%), Query Frame = 0
Query:   15 VTLTTIGYGDLNARTPATKLFTCLYILVGAAMIGALLARLVEMLLDEQEEALMDMIKNRRPHKQRWGGNREEFLAGPWGVLNRTFHSLKDINPYHVKVWSGIAWFVVLTMVGALIFKFTMDLSFVDAIYLTVVSASTVGYGDLSPNTTTTKVFAIFYLPFSTLLLAKVISDYAEMTVEANNRKKHEQILLKCMSQDEFKEMDENEDGRVDKWEYLVRQLMRQGKLSQDEIDKVWKHFHALDTDDSG 260
            VT+ TIGYGD+   TP TK+F C ++LVG   I  LL+ +V  +LD QE  ++  I+         GG  E    G +   N      K      +KV   +   V+   +GALI  F  +L ++D+IYL+V+S +TVGYGD +  T T ++FA  +L FSTL +A+     AE  ++  +R+  + +L + ++ D+    D N +G + K EY++ +L   GK+ + +I ++   F+ LD ++SG
Sbjct:  156 VTMCTIGYGDIAPSTPPTKVFACFFVLVGFGFIDILLSGVVNYVLDLQESMILTGIQ--------MGGGGE----GGFSAKNYIVDVEKGRMRIRLKVGLALGVVVLCIGMGALILYFVEELDWIDSIYLSVMSVTTVGYGDKAFKTLTGRLFAAIWLLFSTLAVARAFLYLAEARIDKRHRRITKWVLHREITIDDLLAADINNNGFISKSEYIIYKLKEMGKIGEKDILQICNQFNKLDPNNSG 389          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9475.23491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LAX6_9PHAE2.130e-5841.32EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A2V3ITP7_9FLOR2.970e-3533.33Two pore potassium channel c n=1 Tax=Gracilariopsi... [more]
R7QMR7_CHOCR6.940e-3431.68EF-hand domain-containing protein n=1 Tax=Chondrus... [more]
UPI001C4E9B3D6.140e-3333.20two-pore potassium channel 5-like isoform X1 n=2 T... [more]
A0A7S1XFF2_9RHOD1.120e-3231.23Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2I4DV14_JUGRE1.410e-3233.33two-pore potassium channel 5 n=4 Tax=Juglandaceae ... [more]
UPI001CC5E46A2.010e-3232.81two-pore potassium channel 5-like n=1 Tax=Telopea ... [more]
A0A5C7I2R0_9ROSI9.660e-3232.68Uncharacterized protein n=1 Tax=Acer yangbiense Ta... [more]
W9QYF4_9ROSA5.620e-3132.79Putative calcium-activated outward-rectifying pota... [more]
A0A2R6P1L7_ACTCC3.080e-3033.74Two-pore potassium channel like n=1 Tax=Actinidia ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003280Two pore domain potassium channelPRINTSPR013332POREKCHANELcoord: 15..43
score: 40.08
coord: 150..159
score: 53.54
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 9..58
e-value: 9.0E-12
score: 44.8
coord: 120..190
e-value: 3.2E-13
score: 49.4
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 210..227
e-value: 0.091
score: 12.3
NoneNo IPR availableGENE3D1.10.238.10coord: 207..271
e-value: 2.6E-8
score: 35.4
NoneNo IPR availableGENE3D1.10.287.70coord: 6..85
e-value: 1.9E-12
score: 49.1
NoneNo IPR availableGENE3D1.10.287.70coord: 95..199
e-value: 2.2E-17
score: 64.8
NoneNo IPR availablePANTHERPTHR11003:SF268TWO-PORE POTASSIUM CHANNEL 4-RELATEDcoord: 14..268
NoneNo IPR availablePANTHERPTHR11003POTASSIUM CHANNEL, SUBFAMILY Kcoord: 14..268
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..111
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..184
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 185..301
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 131..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 155..165
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..130
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..18
score: 0.594
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 95..201
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 13..84
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 4..23
NoneNo IPR availableTMHMMTMhelixcoord: 112..134
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 216..228
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 255..267
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 210..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9475contigP-canaliculata_contig9475:7298..11782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9475.23491.1mRNA_P-canaliculata_contig9475.23491.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9475 5559..12099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9475.23491.1 ID=prot_P-canaliculata_contig9475.23491.1|Name=mRNA_P-canaliculata_contig9475.23491.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=302bp
MKCATLLLCFLSTQVTLTTIGYGDLNARTPATKLFTCLYILVGAAMIGAL
LARLVEMLLDEQEEALMDMIKNRRPHKQRWGGNREEFLAGPWGVLNRTFH
SLKDINPYHVKVWSGIAWFVVLTMVGALIFKFTMDLSFVDAIYLTVVSAS
TVGYGDLSPNTTTTKVFAIFYLPFSTLLLAKVISDYAEMTVEANNRKKHE
QILLKCMSQDEFKEMDENEDGRVDKWEYLVRQLMRQGKLSQDEIDKVWKH
FHALDTDDSGFLEFNEVSGERDANNDGIIDIREIRAARRREKRVCKEDVN
Q*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0032802pore_dom_K_chnl
IPR013099K_chnl_dom
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair