prot_P-canaliculata_contig9469.23487.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9469.23487.1
Unique Nameprot_P-canaliculata_contig9469.23487.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length586
Homology
BLAST of mRNA_P-canaliculata_contig9469.23487.1 vs. uniprot
Match: D7FQB3_ECTSI (Glucosidase 2 subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB3_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 6.430e-132
Identity = 316/630 (50.16%), Postives = 377/630 (59.84%), Query Frame = 0
Query:    1 MIEEARAKAIEAYRRRGERDTIRKNSQEEGSRAIAKWKATLKAPSTDTDKEEERTRKEDXXXXXXXXXXXXXRVYLLDEERLERRERIQLAAE------DVKQGGDAPSGGGEGARYRRRAAALGP-----TSCGDGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADRRKSRPGRRSGGHGGRDKQPDTAEDILDLCWSLANAVGEGEATSSSSQKKEEQRSGEGDRVAG---------------------MEDGATLSLRSYVKRRQQGGGR------ESITEEKKRVELRKTALLGPVLNDGARGVNLGLTILLRAVGLPLLSPLRGLVEALRFLEGVAAETVAKAASDVGAPLV----VRETLEGYRDRGLEGISPHLDYRRYPTLRSLAIRWHMFLEGSGRFLLVMWDAPVALWEFLSPDLDDQHRRPEAAMLREGIARAKGSLRLRDENRERDALSEGKGAKRGRRKREETEAKRLLGLDLGDDLGFAALAEKCLELREGGYVYSLCPFKEARQDRHSLGRWKAWSP----RRGQNDDRVMLFDGGSRCHNKKQRSAEVLVECGPSDALVAADELEIGVYRLVMETPLACTESDLQEMEQRLEVFQVGR 584
            ++E+AR  A+EAYRR       RK ++E   R +A+W+ATL A   D + +++  +                +VYL DEER ERRER+QLA +        ++GGD   G G     R  AAALGP     T      +     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 G ++   T EDIL L W +  +  + +            R   G+R  G                               +YVK+RQ           ++   EK+  ELRKTALLGPVLNDG RGV LGLTILLR  GLPLLSPLRGL  A  FL   AA   A  A+     L     VR  LEGYRDRGL GISPHLDYRRYPTLRS+ + W  FL G+G+ LLVMWDAPVALW+F  P  DD+H RPEAAMLREGIARA+  L+      E+   + G+G  RG+R+REE+EAKRL GLDLG+   FAALAEKCL+L EGGY+YSLCPFKEA+QD+HSLGRW+ W P    R G+  DRVMLFDGGSRCHN KQRS EV V+CG  DALVAA+E+EIG YRL +ETPLACTE+ L E E+ LE   + R
Sbjct:  135 VLEDARTTAMEAYRRVEAGLEARKGAEERSERVVAEWQATLNAGEVDEEVQKQELK-------AVEKLEVLLKVYLQDEERKERRERVQLAEQGRCETASRREGGDGQGGAGR----RAMAAALGPCEENTTEREAAAKVRAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEEGASTVEDILGLEWVVDVSADDDDGAF-------RDRGTGGNREPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYVKQRQXXXXXXXXXXXQAKAGEKRAEELRKTALLGPVLNDGERGVYLGLTILLRLAGLPLLSPLRGLAAAFGFLRDRAARAAAGLAASESWGLAPASTVRVALEGYRDRGLPGISPHLDYRRYPTLRSVVLHWDEFLHGNGKSLLVMWDAPVALWDFCFPYRDDKHERPEAAMLREGIARARAILQ------EKKPDTAGRGG-RGKRRREESEAKRLSGLDLGEGSRFAALAEKCLDLEEGGYLYSLCPFKEAKQDKHSLGRWRGWGPGGRGRAGRGRDRVMLFDGGSRCHNNKQRSCEVSVQCGSEDALVAAEEIEIGTYRLRLETPLACTEAHLAEAERGLEALGLVR 739          
BLAST of mRNA_P-canaliculata_contig9469.23487.1 vs. uniprot
Match: A0A6H5JF29_9PHAE (MRH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF29_9PHAE)

HSP 1 Score: 384 bits (987), Expect = 5.840e-124
Identity = 222/359 (61.84%), Postives = 254/359 (70.75%), Query Frame = 0
Query:  242 LSLRSYVKRRQQG-----GGR-ESITEEKKRVELRKTALLGPVLNDGARGVNLGLTILLRAVGLPLLSPLRGLVEALRFLEGVAAETVAKAASDVGAPLV----VRETLEGYRDRGLEGISPHLDYRRYPTLRSLAIRWHMFLEGSGRFLLVMWDAPVALWEFLSPDLDDQHRRPEAAMLREGIARAKGSLRLRDENRERDALSEGKGAKRGRRKREETEAKRLLGLDLGDDLGFAALAEKCLELREGGYVYSLCPFKEARQDRHSLGRWKAWS------PRRGQNDDRVMLFDGGSRCHNKKQRSAEVLVECGPSDALVAADELEIGVYRLVMETPLACTESDLQEMEQRLEVFQVGR 584
            LSL++YVK+RQ G     GGR ++   EK+  ELRKTALLGPVLNDG RGV LGLTILLR  GLPLLSPLRGL  A  FL   AA   A  A+     L     VR  LE YRDRGL GISPHLDYRRYPTLRS+ +RW  FL G+G+FLLVMWDAPVALW+F  P  DD++ RPEAAMLREGIARA+  L+      ER   + G G        EE+EAKRL GLDLG+   FAALA KCL+L EGGY+YSLCPFK+A+QD+HSLGRW+ W       P RG+N  RVMLFDGGSRCHNK QRS EV VECGP DALVAA+E+EIG Y L +ETPLACTE+ + E E  LE   + R
Sbjct:  144 LSLKAYVKQRQAGSAAANGGRGQAKAGEKRAEELRKTALLGPVLNDGERGVYLGLTILLRLAGLPLLSPLRGLAAAFGFLRDWAARAAAGLAASESWGLTPASTVRVALEDYRDRGLPGISPHLDYRRYPTLRSVVLRWDEFLHGNGKFLLVMWDAPVALWDFCFPYRDDEYERPEAAMLREGIARARAILQ------ERKPDTAG-GXXXXXXXXEESEAKRLSGLDLGEGSRFAALAGKCLDLEEGGYLYSLCPFKDAKQDKHSLGRWRGWGTGGRGLPGRGRN--RVMLFDGGSRCHNK-QRSCEVSVECGPEDALVAAEEIEIGTYHLRLETPLACTEAHVAEAELGLEALGLVR 492          
BLAST of mRNA_P-canaliculata_contig9469.23487.1 vs. uniprot
Match: A0A3M6VER9_9STRA (MRH domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VER9_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 9.450e-17
Identity = 61/202 (30.20%), Postives = 92/202 (45.54%), Query Frame = 0
Query:  383 VMWDAPVALWEFLSPDLDDQHRRPEAAMLREGIARAKGSLRLRDENRERDALSEGKGAKRGRRKREETEAKRLLGLDLGDDLGFAALAEKCLELR------------EGGYVYSLCPFKEARQDRHSLGRWKAWS-------PRRGQNDDRVMLFDGGSRCHNKKQRSAEVLVECGPSDALVAADELEIGVYRLVMETPLAC 565
            V+WDAPV ++ +L P LD++ + P A  LR  +   +  +               K  K G  KRE  E      +D G D  + AL + C+E R            +  Y Y  C F E +QD+  LG+W  W        P  G+ D   M +  G +C+N  +RS  + +ECG  D +++ DE    VY + + +PLAC
Sbjct:  133 VVWDAPVYVYHYLFPTLDNEVKLPTAESLRTVLHEIESDI--------------AKLEKDGNEKREMAE------MDYGPDRAYFALKKNCIEKRVEDAARSKRGLCKQKYEYKFCAFGEVKQDQTKLGKWDGWYGGEDKGLPSSGKVDYTRMRYSQGDKCYNGPKRSVLLHLECGERDEILSVDEPSTCVYEMAVRSPLAC 314          
BLAST of mRNA_P-canaliculata_contig9469.23487.1 vs. uniprot
Match: A0A425CFK2_9STRA (Glucosidase 2 subunit beta n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CFK2_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.270e-15
Identity = 56/202 (27.72%), Postives = 92/202 (45.54%), Query Frame = 0
Query:  383 VMWDAPVALWEFLSPDLDDQHRRPEAAMLREGIARAKGSLRLRDENRERDALSEGKGAKRGRRKREETEAKRLLGLDLGDDLGFAALAEKCLELR------------EGGYVYSLCPFKEARQDRHSLGRWKAWS-------PRRGQNDDRVMLFDGGSRCHNKKQRSAEVLVECGPSDALVAADELEIGVYRLVMETPLAC 565
            V+WDAPV ++ +L P LD++ + P A  LR  +   +  +   +++R                     E + +  +D G D  + AL + C+E R            +  Y Y  C F E +QD+  LG+W  W        P  G+ D   M +  G +C+N  +RS  + +ECG  D +++ DE    VY + + +PLAC
Sbjct:  387 VVWDAPVYVYHYLFPTLDNEVKLPTAESLRTVLHEIESDIAKLEKDR--------------------NEKREMAEMDYGPDRAYFALKKNCIEKRVEDAARSKRGLCKQKYQYKFCAFGEVKQDQTKLGKWDGWYGKEDKGLPSSGKVDYTRMRYSQGDKCYNGPKRSVLLHLECGERDEILSVDEPSTCVYEMAVRSPLAC 568          
BLAST of mRNA_P-canaliculata_contig9469.23487.1 vs. uniprot
Match: A0A137NYP4_CONC2 (Glucosidase 2 subunit beta (Fragment) n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137NYP4_CONC2)

HSP 1 Score: 70.5 bits (171), Expect = 3.710e-9
Identity = 44/126 (34.92%), Postives = 61/126 (48.41%), Query Frame = 0
Query:  446 KREETEAKRLLGLDLGDDLGFAALAEKCLELREGGYVYSLCPFKEARQ------DRHSLGRWKAWSPRRGQNDDRVMLFDGGSRCHNKKQRSAEVLVECGPSDALVAADELEIGVYRLVMETPLAC 565
            KRE  +    L  D+G D  ++AL++KC EL  G YVYS+C F EA Q      D  SLG +  W       D    L+  G+ C N   RS ++ + CG  + + +  E     Y + M TP AC
Sbjct:  331 KRELDDLNTKLNRDMGPDGEYSALSDKCFELDNGEYVYSVCMFGEANQKSNKNHDSVSLGHFSEWVG----TDYSAQLYSNGTPCWNGPSRSVKLNLICGTEEKVTSVTEPSKCEYHISMLTPAAC 452          
BLAST of mRNA_P-canaliculata_contig9469.23487.1 vs. uniprot
Match: C4Y3D7_CLAL4 (Glucosidase 2 subunit beta n=2 Tax=Clavispora lusitaniae TaxID=36911 RepID=C4Y3D7_CLAL4)

HSP 1 Score: 64.3 bits (155), Expect = 3.460e-7
Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 0
Query:  479 GGYVYSLCPFKEARQDRHSLGRWKAWSPRRGQNDDRVMLFDGGSRCHNKKQRSAEVLVECGPSDALVAADELEIGVYRLVMETPLACTESDLQEMEQRLEVFQVGRG 585
            G Y Y +       QD   +GR+  +       D   + F  GS+C N  QRSA+V + CGP   +V+  E E   YR+++ETPL C  SDL E E+  E F+V  G
Sbjct:  387 GDYTYKIGFLDSVYQDNTLVGRFSGF-------DSSSLTFSHGSKCWNGPQRSAKVDMVCGPEHVIVSVSEPEKCQYRILLETPLVC--SDLSE-EELAESFKVDLG 483          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9469.23487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FQB3_ECTSI6.430e-13250.16Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sili... [more]
A0A6H5JF29_9PHAE5.840e-12461.84MRH domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A3M6VER9_9STRA9.450e-1730.20MRH domain-containing protein n=1 Tax=Peronospora ... [more]
A0A425CFK2_9STRA1.270e-1527.72Glucosidase 2 subunit beta n=1 Tax=Peronospora eff... [more]
A0A137NYP4_CONC23.710e-934.92Glucosidase 2 subunit beta (Fragment) n=1 Tax=Coni... [more]
C4Y3D7_CLAL43.460e-737.38Glucosidase 2 subunit beta n=2 Tax=Clavispora lusi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 133..164
NoneNo IPR availableSUPERFAMILY50911Mannose 6-phosphate receptor domaincoord: 484..565
IPR009011Mannose-6-phosphate receptor binding domain superfamilyGENE3D2.70.130.10coord: 466..565
e-value: 3.1E-20
score: 74.1
IPR036607Glucosidase 2 subunit beta-likePFAMPF13015PRKCSH_1coord: 460..571
e-value: 8.2E-14
score: 51.6
IPR039794Glucosidase II beta subunit-likePANTHERPTHR12630N-LINKED OLIGOSACCHARIDE PROCESSINGcoord: 36..569

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9469contigP-canaliculata_contig9469:564..6379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9469.23487.1mRNA_P-canaliculata_contig9469.23487.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9469 426..7007 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9469.23487.1 ID=prot_P-canaliculata_contig9469.23487.1|Name=mRNA_P-canaliculata_contig9469.23487.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=586bp
MIEEARAKAIEAYRRRGERDTIRKNSQEEGSRAIAKWKATLKAPSTDTDK
EEERTRKEDRKAVEKLEALLKARVYLLDEERLERRERIQLAAEDVKQGGD
APSGGGEGARYRRRAAALGPTSCGDGKEGREAAEKVRVMRAAAMARLDEE
KEEDEDKRGKKERKRGSRKNADRRKSRPGRRSGGHGGRDKQPDTAEDILD
LCWSLANAVGEGEATSSSSQKKEEQRSGEGDRVAGMEDGATLSLRSYVKR
RQQGGGRESITEEKKRVELRKTALLGPVLNDGARGVNLGLTILLRAVGLP
LLSPLRGLVEALRFLEGVAAETVAKAASDVGAPLVVRETLEGYRDRGLEG
ISPHLDYRRYPTLRSLAIRWHMFLEGSGRFLLVMWDAPVALWEFLSPDLD
DQHRRPEAAMLREGIARAKGSLRLRDENRERDALSEGKGAKRGRRKREET
EAKRLLGLDLGDDLGFAALAEKCLELREGGYVYSLCPFKEARQDRHSLGR
WKAWSPRRGQNDDRVMLFDGGSRCHNKKQRSAEVLVECGPSDALVAADEL
EIGVYRLVMETPLACTESDLQEMEQRLEVFQVGRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009011Man6P_isomerase_rcpt-bd_dom_sf
IPR036607PRKCSH
IPR039794Gtb1-like