prot_P-canaliculata_contig94609.23479.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig94609.23479.1
Unique Nameprot_P-canaliculata_contig94609.23479.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length128
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig94609.23479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..52
NoneNo IPR availableGENE3D3.40.50.300coord: 1..128
e-value: 1.3E-7
score: 33.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig94609contigP-canaliculata_contig94609:664..1047 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig94609.23479.1mRNA_P-canaliculata_contig94609.23479.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig94609 640..1047 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig94609.23479.1 ID=prot_P-canaliculata_contig94609.23479.1|Name=mRNA_P-canaliculata_contig94609.23479.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=128bp
MPGAGKSTLASALKEAISSSKRVSSEKTKTSANQKARDNKRLLREVRAAR
AEVVIVDGIEDAGTVDELLKNFDGTVVTVEADQAERFRRLRTDSRFADAT
ATELKNLDQEALAAGVGEIANLASFRVF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase