prot_P-canaliculata_contig94596.23477.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig94596.23477.1
Unique Nameprot_P-canaliculata_contig94596.23477.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length232
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig94596.23477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010263Type VI secretion protein, VC_A0114PFAMPF05936T6SS_VasEcoord: 2..195
e-value: 1.9E-11
score: 43.3
IPR010263Type VI secretion protein, VC_A0114PANTHERPTHR35566FAMILY NOT NAMEDcoord: 2..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig94596contigP-canaliculata_contig94596:133..828 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig94596.23477.1mRNA_P-canaliculata_contig94596.23477.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig94596 133..828 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig94596.23477.1 ID=prot_P-canaliculata_contig94596.23477.1|Name=mRNA_P-canaliculata_contig94596.23477.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=232bp
NQSPGSHPFDNFQKFCQVIGQLTIVDPQGERFVDYLRYDHDRIYESLSWA
WDRIRRCFIDPGDTRIKRIPLVAESMQTEAGADVIMKAVLAPEMFSSDWN
LYLAFNYSDMNREDAGLFFNTYLNDASEFYWKLGSHEKIDRYFVNREQGV
LFDNPERMKSELPKKTGWIYADIKRDEYWDGVMQSGTLCLRIDQDNLRTP
ASDLGTEKITVGINQRTFQYRMSIFAVKQNG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010263VI_chp_4