prot_P-canaliculata_contig94475.23468.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig94475.23468.1
Unique Nameprot_P-canaliculata_contig94475.23468.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length131
Homology
[Close]
BLAST of mRNA_P-canaliculata_contig94475.23468.1 vs. uniprot
Match: A0A356AD46_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356AD46_9PLAN)

HSP 1 Score: 103 bits (257), Expect = 7.120e-26
Identity = 51/130 (39.23%), Postives = 71/130 (54.62%), Query Frame = 0 
Query:    1 MKLTAEHFDGFSELLLGWKATIRDNVGNVDAKWFSPSGRRKATFALPFDSIDLAAVGISLSELLPRYDGGVDDFPHHILQFTDGDDDITVCVRAGIKWPPDVQADIDTFYRIWKPIAQAVESHAEMPRRS 130
            M L AEHFDGFSE L+ W          V+A W     R +  F + F    +      L+EL P YDG VDDFP + L  T+GD  ++  V AG+KWP + +A +D+F R+W+P+   +E    +P RS
Sbjct:    1 MHLRAEHFDGFSEHLVCWVLEASHGTAIVEASWRGHGDRTERVFEIDFPVSRIKECAEKLAELKPVYDGHVDDFPQYSLSVTEGDYKLSTKVLAGVKWPDEDKAAVDSFMRVWRPLYSDIEELLAIPGRS 130
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig94475.23468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A356AD46_9PLAN7.120e-2639.23Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig94475contigP-canaliculata_contig94475:706..1098 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig94475.23468.1mRNA_P-canaliculata_contig94475.23468.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig94475 706..1098 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig94475.23468.1 ID=prot_P-canaliculata_contig94475.23468.1|Name=mRNA_P-canaliculata_contig94475.23468.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=131bp
MKLTAEHFDGFSELLLGWKATIRDNVGNVDAKWFSPSGRRKATFALPFDS
IDLAAVGISLSELLPRYDGGVDDFPHHILQFTDGDDDITVCVRAGIKWPP
DVQADIDTFYRIWKPIAQAVESHAEMPRRS*
back to top