prot_P-canaliculata_contig944.23462.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig944.23462.1
Unique Nameprot_P-canaliculata_contig944.23462.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length137
Homology
BLAST of mRNA_P-canaliculata_contig944.23462.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 2.670e-51
Identity = 82/137 (59.85%), Postives = 106/137 (77.37%), Query Frame = 0
Query:    1 LAAFSDGNWGAKPDNGISTSSYITIPSNGLISFKVSIQGLTAQSTMKAELEAAALIMKEAVYCSNMMLELGFKEAFGSVPLYIDNTSALHVAGNRTYSPRAKHIALRYLFVQVLVEEGKITIHFVKTQDHIADLGTK 137
            LA FSD NW   PDNG STSSY+T+ +N  +SF+  +QGLTA STM+AEL A+AL MKEAV+CSNMM ELGF + F  +P+Y DNT+ LH  GNR++S R KHIALR+ F++ LV EGKI+IH+  T+D++A +GTK
Sbjct:   57 LATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTK 193          
BLAST of mRNA_P-canaliculata_contig944.23462.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 9.940e-50
Identity = 83/137 (60.58%), Postives = 107/137 (78.10%), Query Frame = 0
Query:    1 LAAFSDGNWGAKPDNGISTSSYITIPSNGLISFKVSIQGLTAQSTMKAELEAAALIMKEAVYCSNMMLELGFKEAFGSVPLYIDNTSALHVAGNRTYSPRAKHIALRYLFVQVLVEEGKITIHFVKTQDHIADLGTK 137
            LA FSD NW   PDNG STSSY+T+ +N  +SF+  +QGLTA STM+AEL A+AL MKEAV+CSNMM ELGF + F  +P+Y DNT+ LH  GNR++S R KHIALR+ F++ LV EGKI+IH+  T+D++AD+GTK
Sbjct:  282 LATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTK 418          
BLAST of mRNA_P-canaliculata_contig944.23462.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 1.190e-48
Identity = 84/137 (61.31%), Postives = 109/137 (79.56%), Query Frame = 0
Query:    1 LAAFSDGNWGAKPDNGISTSSYITIPSNGLISFKVSIQGLTAQSTMKAELEAAALIMKEAVYCSNMMLELGFKEAFGSVPLYIDNTSALHVAGNRTYSPRAKHIALRYLFVQVLVEEGKITIHFVKTQDHIADLGTK 137
            LA FSD NW   PDNG STSSY+T+ +N  +SF+  +QGLTA STM+AEL A+AL MKEAV+CSNMM ELGF + F  +P+Y DNT+ LH  GNR++S R KHIALR+ F++ LV EGKI+IH+V+T+D++AD+GTK
Sbjct:  842 LATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTK 978          
BLAST of mRNA_P-canaliculata_contig944.23462.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 7.520e-48
Identity = 83/137 (60.58%), Postives = 107/137 (78.10%), Query Frame = 0
Query:    1 LAAFSDGNWGAKPDNGISTSSYITIPSNGLISFKVSIQGLTAQSTMKAELEAAALIMKEAVYCSNMMLELGFKEAFGSVPLYIDNTSALHVAGNRTYSPRAKHIALRYLFVQVLVEEGKITIHFVKTQDHIADLGTK 137
            LA FSD NW   PDNG STSSY+T+ +N  +SF+  +QGLTA STM+AEL A+AL MKEAV+CSNMM ELG  + F  +P+Y DNT+ LH  GNR++S R KHIALR+ F++ LV EGKI+IH+V T+D++AD+GTK
Sbjct:  503 LATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTK 639          
BLAST of mRNA_P-canaliculata_contig944.23462.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 2.540e-46
Identity = 82/137 (59.85%), Postives = 106/137 (77.37%), Query Frame = 0
Query:    1 LAAFSDGNWGAKPDNGISTSSYITIPSNGLISFKVSIQGLTAQSTMKAELEAAALIMKEAVYCSNMMLELGFKEAFGSVPLYIDNTSALHVAGNRTYSPRAKHIALRYLFVQVLVEEGKITIHFVKTQDHIADLGTK 137
            LA FSD NW   PDNG STSSY+T+ +N  +SF+  +QGLTA STM+AEL A+AL M EAV+ SNMM ELGF + F  +P+Y DNT+ LH  GNR++S R KHIALR+ F++ LV EGKI+IH+V T+D++AD+GTK
Sbjct: 1511 LATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTK 1647          
BLAST of mRNA_P-canaliculata_contig944.23462.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.670e-43
Identity = 77/137 (56.20%), Postives = 102/137 (74.45%), Query Frame = 0
Query:    1 LAAFSDGNWGAKPDNGISTSSYITIPSNGLISFKVSIQGLTAQSTMKAELEAAALIMKEAVYCSNMMLELGFKEAFGSVPLYIDNTSALHVAGNRTYSPRAKHIALRYLFVQVLVEEGKITIHFVKTQDHIADLGTK 137
            LA FS+ NW   PDNG S+S Y+T+  N  +SFK  IQG TA STM+AEL A+AL MKEAV+CSN++ ELG  + F  VPLY DNT+ LH  GNR++S R KHIALR+ +++ L+ EG+I+IH++ T  +IAD+GTK
Sbjct: 1012 LATFSESNWANNPDNGKSSSCYLTMLGNAPVSFKSGIQGPTAMSTMEAELIASALAMKEAVFCSNILTELGLGKEFAQVPLYCDNTATLHALGNRSFSSRTKHIALRFFYIRELISEGRISIHYIPTDSNIADIGTK 1148          
BLAST of mRNA_P-canaliculata_contig944.23462.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 2.670e-42
Identity = 77/137 (56.20%), Postives = 103/137 (75.18%), Query Frame = 0
Query:    1 LAAFSDGNWGAKPDNGISTSSYITIPSNGLISFKVSIQGLTAQSTMKAELEAAALIMKEAVYCSNMMLELGFKEAFGSVPLYIDNTSALHVAGNRTYSPRAKHIALRYLFVQVLVEEGKITIHFVKTQDHIADLGTK 137
            L A SD NWG  PDN  S SSYI + S   +SFK  +Q LTA ST++AEL AAAL MKE ++C+NMM ELGF   F S PLYI NT+ LHV GN+T+S R KH+ALR+ +++ +V+EG+I+IH++ T+D++AD+GTK
Sbjct:  536 LTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTK 671          
BLAST of mRNA_P-canaliculata_contig944.23462.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 3.920e-41
Identity = 76/137 (55.47%), Postives = 99/137 (72.26%), Query Frame = 0
Query:    1 LAAFSDGNWGAKPDNGISTSSYITIPSNGLISFKVSIQGLTAQSTMKAELEAAALIMKEAVYCSNMMLELGFKEAFGSVPLYIDNTSALHVAGNRTYSPRAKHIALRYLFVQVLVEEGKITIHFVKTQDHIADLGTK 137
            L AF+D NWG  PDNG STSS++T+  +  ++FK  +Q LT QSTM+ EL AAAL +KEAV+CSN++ ELGF +    VPLY DNT+ LH  GNR+YS   KHIALR+ F++ LV EG+I IH+V    + AD+GTK
Sbjct:  565 LTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTK 701          
BLAST of mRNA_P-canaliculata_contig944.23462.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 1.110e-40
Identity = 77/123 (62.60%), Postives = 91/123 (73.98%), Query Frame = 0
Query:    1 LAAFSDGNWGAKPDNGISTSSYITIPSNGLISFKVSIQGLTAQSTMKAELEAAALIMKEAVYCSNMMLELGFKEAFGSVPLYIDNTSALHVAGNRTYSPRAKHIALRYLFVQVLVEEGKITIH 123
            L AFSD NW + PDN  STSSY+ + S   +SFK  +Q LT  STM+AEL AAAL MKEAV+CSNMM ELGF + FG VPLYI+NT+ LHV GN+ YS R KHIAL +  V+ LV+EG ITIH
Sbjct:  378 LTAFSDANWESNPDNARSTSSYMIMMSKAPVSFKTGLQDLTVMSTMEAELLAAALTMKEAVFCSNMMTELGFGQQFGQVPLYINNTATLHVIGNQAYSSRTKHIALLFFCVRELVKEGAITIH 500          
BLAST of mRNA_P-canaliculata_contig944.23462.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.130e-40
Identity = 77/137 (56.20%), Postives = 98/137 (71.53%), Query Frame = 0
Query:    1 LAAFSDGNWGAKPDNGISTSSYITIPSNGLISFKVSIQGLTAQSTMKAELEAAALIMKEAVYCSNMMLELGFKEAFGSVPLYIDNTSALHVAGNRTYSPRAKHIALRYLFVQVLVEEGKITIHFVKTQDHIADLGTK 137
            L  FSD NW   PDNG STS Y T+  +  +S K  IQG  A STM+AEL A+AL MKEAV+CSNM+ ELGF + F  VPLY DNT+ LH  GNR++S R  HIALR+ +++ LV EG+I+IH+V T  ++AD+GTK
Sbjct: 1040 LGTFSDTNWANNPDNGKSTSCYWTMLEHAPVSLKSGIQGPAAISTMEAELIASALAMKEAVFCSNMLTELGFGKEFAQVPLYCDNTATLHALGNRSFSSRENHIALRFFYIRELVLEGRISIHYVPTDSNLADIGTK 1176          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig944.23462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMK0_9PHAE2.670e-5159.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE9.940e-5060.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE1.190e-4861.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JME8_9PHAE7.520e-4860.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE2.540e-4659.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K129_9PHAE1.670e-4356.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBU1_9PHAE2.670e-4256.20CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JG39_9PHAE3.920e-4155.47Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J6N1_9PHAE1.110e-4062.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JBV6_9PHAE1.130e-4056.20Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 1..117
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig944contigP-canaliculata_contig944:27062..27472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig944.23462.1mRNA_P-canaliculata_contig944.23462.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig944 27062..27472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig944.23462.1 ID=prot_P-canaliculata_contig944.23462.1|Name=mRNA_P-canaliculata_contig944.23462.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=137bp
LAAFSDGNWGAKPDNGISTSSYITIPSNGLISFKVSIQGLTAQSTMKAEL
EAAALIMKEAVYCSNMMLELGFKEAFGSVPLYIDNTSALHVAGNRTYSPR
AKHIALRYLFVQVLVEEGKITIHFVKTQDHIADLGTK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like