prot_P-canaliculata_contig94348.23456.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig94348.23456.1
Unique Nameprot_P-canaliculata_contig94348.23456.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length312
Homology
BLAST of mRNA_P-canaliculata_contig94348.23456.1 vs. uniprot
Match: UPI0016799C9F (type II secretion system F family protein n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI0016799C9F)

HSP 1 Score: 469 bits (1206), Expect = 1.610e-164
Identity = 244/310 (78.71%), Postives = 271/310 (87.42%), Query Frame = 0
Query:    1 MNFDNALTIMIAMLFLGVSLVLCFVAIRGAVLENRRVERRLAGPARLDGEVDDGADAPSREKSNFLSQLGSQLTLPDEKEITRLRYKLVQAGYFDRSAVKSFLAARVICLFGPVAICLSLWGLLAAKFGTTPTIVICVIFLIIGLFGPEQVLRKKAGKRTDQCRRGFPDMMDLMTACVEAGLAMDAALVRVGHELGGRYPALKQNLDIMNLELRAGRERNEAMLNFAGRINLDEAKALAIMLKQAEEMGSSVGKALRTFSDDMRNKRMMRAEEKAAALSAKLTVPLIMFIFPTIMVMLMLPAGIRVMTGL 310
            M F NALT++IA+ FLGVSLVLCF+A+RGA+ EN RVERRLAG ARLD + D G  A SR K N +SQLG+ LTLPD KEITRLR+ L QAGYFDRS VK+FLAARVI LFGP  ICL +WG +AAK GT P I+IC     +GL GPE+ L+ KAGKRTDQCR+GFPDMMDLMTACVEAGL MDAAL+RVGHELGGRYPALK+NLDIMNLELRAGRERNEAM+NFA RINLDEAKALA+MLKQAEEMGSSVGKALRTFS+DMR+KRMM+AEEKAAALSAKLTVPLI+FIFPTIMVMLMLPAGIR+M GL
Sbjct:    1 MRFHNALTVIIALTFLGVSLVLCFIAVRGAIRENSRVERRLAGGARLDEDADVGIGAKSRAKRNLISQLGAHLTLPDAKEITRLRFMLAQAGYFDRSTVKTFLAARVIFLFGPAMICLLMWGSIAAKLGTKPAILICFSLAGLGLLGPERFLKWKAGKRTDQCRKGFPDMMDLMTACVEAGLGMDAALIRVGHELGGRYPALKENLDIMNLELRAGRERNEAMINFADRINLDEAKALAVMLKQAEEMGSSVGKALRTFSEDMRHKRMMKAEEKAAALSAKLTVPLILFIFPTIMVMLMLPAGIRIMEGL 310          
BLAST of mRNA_P-canaliculata_contig94348.23456.1 vs. uniprot
Match: UPI00040C2D68 (type II secretion system F family protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI00040C2D68)

HSP 1 Score: 328 bits (841), Expect = 4.030e-109
Identity = 178/305 (58.36%), Postives = 229/305 (75.08%), Query Frame = 0
Query:    1 MNFDNALTIMIAMLFLGVSLVLCFVAIRGAVLENRRVERRLAGPARLDGEVDDGADAPSREKSNFLSQLGSQLTLPDEKEITRLRYKLVQAGYFDRSAVKSFLAARVICLFGPVAICLSLWGLLAAKFGTTPTIVICVIFLIIGLFGPEQVLRKKAGKRTDQCRRGFPDMMDLMTACVEAGLAMDAALVRVGHELGGRYPALKQNLDIMNLELRAGRERNEAMLNFAGRINLDEAKALAIMLKQAEEMGSSVGKALRTFSDDMRNKRMMRAEEKAAALSAKLTVPLIMFIFPTIMVMLMLPAGIR 305
            ++F N+LTI++A+ FL +S+ L F+A R A   NR++ +RL      D ++++    P R+   +LS++G  LTLP  +EITR+R +L +AGY+D +AVK+F A RVI LFGP  I L  W L+    G    I++     + GL GP   +R K  +RT +C+ GFPDM DLM AC+EAGL +DAAL+RV +ELGGRYPALK NL+IMNLELRAGRER++AM+NFA RI L+EAKALAIML+QAEEMGSS+G ALRTFSDDMR KRM+ AEEKA ALSAKLT+PLI+FIFPT+MVML+LPAGIR
Sbjct:    2 LSFTNSLTIIVALSFLAISIGLMFLAARNAFNHNRQLNKRLVSSN--DADIENIGLKPKRK---WLSRMGDHLTLPGAEEITRIRSELAKAGYYDEAAVKTFYAIRVISLFGPQLILLLCWSLVWENMGAKKIILLASTLAVSGLLGPNMFIRWKQKRRTLRCKEGFPDMTDLMVACIEAGLGLDAALMRVSNELGGRYPALKVNLEIMNLELRAGRERHKAMMNFAERIGLEEAKALAIMLRQAEEMGSSMGAALRTFSDDMRTKRMLLAEEKAMALSAKLTIPLIVFIFPTLMVMLLLPAGIR 301          
BLAST of mRNA_P-canaliculata_contig94348.23456.1 vs. uniprot
Match: A0A848V8W6_9PROT (Type II secretion system F family protein n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V8W6_9PROT)

HSP 1 Score: 302 bits (774), Expect = 5.950e-99
Identity = 157/305 (51.48%), Postives = 222/305 (72.79%), Query Frame = 0
Query:    5 NALTIMIAMLFLGVSLVLCFVAIRGAVLENRRVERRLAGPARLDGEVDDGADAPSREKSNFLSQLGSQLTLPDEKEITRLRYKLVQAGYFDRSAVKSFLAARVICLFGPVAICLSLWGLLAAKFGTTPTIVICVIFLIIGLFGPEQVLRKKAGKRTDQCRRGFPDMMDLMTACVEAGLAMDAALVRVGHELGGRYPALKQNLDIMNLELRAGRERNEAMLNFAGRINLDEAKALAIMLKQAEEMGSSVGKALRTFSDDMRNKRMMRAEEKAAALSAKLTVPLIMFIFPTIMVMLMLPAGIRVMTG 309
            N L I++A+LF+  ++ L FVA++ A+ ++R+++ RLAG  + +      +     +++       + L++PDE+EIT++R +L +AGY+ +SAVK++ A R++CL  P  I +  W +   +      I I    ++ GL GP  ++R K  +RT Q R GFPDMMDLM AC+EAGL M+AAL+RV  E+G RYP LK NLD++N+ELRAGRER+  MLNFA R+N++EAKALA+ML+Q+EEMGSS+GK+LRTFSD+MRNKRMMRAEEKA AL AK+TVPLI+FIFP IM ML++PAG+R+M G
Sbjct:    8 NQLIIVVALLFIAFAITLIFVAMKDALEDSRKIKARLAGNWKEE------STGTILKQNQAFQNFANHLSMPDEEEITKIRARLSKAGYYGKSAVKTYYAVRILCLVVPQLIFMLNWAIFMPQLEQNLAISISCGLIVAGLLGPPILIRYKMSRRTRQVRNGFPDMMDLMVACIEAGLGMNAALLRVAEEIGNRYPVLKINLDLLNIELRAGRERHIGMLNFANRVNMEEAKALAVMLRQSEEMGSSLGKSLRTFSDEMRNKRMMRAEEKAMALPAKMTVPLIIFIFPAIMAMLLIPAGLRMMEG 306          
BLAST of mRNA_P-canaliculata_contig94348.23456.1 vs. uniprot
Match: UPI0003A877B8 (type II secretion system F family protein n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI0003A877B8)

HSP 1 Score: 287 bits (735), Expect = 5.800e-93
Identity = 158/297 (53.20%), Postives = 210/297 (70.71%), Query Frame = 0
Query:    9 IMIAMLFLGVSLVLCFVAIRGAVLENRRVERRLAGPARLDGEVDDGADAPSREKSNFLSQLGSQLTLPDEKEITRLRYKLVQAGYFDRSAVKSFLAARVICLFGPVAICLSLWGLLAAKFGTTPTIVICVIFLIIGLFGPEQVLRKKAGKRTDQCRRGFPDMMDLMTACVEAGLAMDAALVRVGHELGGRYPALKQNLDIMNLELRAGRERNEAMLNFAGRINLDEAKALAIMLKQAEEMGSSVGKALRTFSDDMRNKRMMRAEEKAAALSAKLTVPLIMFIFPTIMVMLMLPAGIR 305
            I I+++FL  S+ L F++I+  +   + + RRL  P    G       + S  K   L++  +++TLP E EITR RY L QAGYF  SAVK+F   R + +  P  I +S WG LA  +  +  I     F I+GLFGP  ++++K  +RT  CR GFPDMMDL+ AC+EAGL +DAA+ RV  ELG RYP LK  LD+MNLELRAGR R+EAMLNFA R++L+EA+AL  MLKQ+E+MGSS+G ALR+FS++MR+KRM+ AEEKA ALSAKLTVPLI+FIFPTI+++L++PAGIR
Sbjct:   14 ITISIVFLAASITLVFMSIKTTLEYQKNINRRLK-PHTTAGVKTSQEPSSSIFKRYNLAKFATKITLPHEAEITRTRYLLSQAGYFSPSAVKTFYGLRTLAVIVPQFILISSWGYLAKNYEFSTLIFTSATFAILGLFGPGFIVKRKKKRRTLLCREGFPDMMDLLVACIEAGLGLDAAMNRVAEELGQRYPPLKVGLDLMNLELRAGRPRHEAMLNFANRVDLEEARALTTMLKQSEDMGSSLGTALRSFSEEMRSKRMLLAEEKALALSAKLTVPLILFIFPTIIILLLMPAGIR 309          
BLAST of mRNA_P-canaliculata_contig94348.23456.1 vs. uniprot
Match: A0A520XQ96_9ACTN (Type II secretion system F family protein n=2 Tax=Bacteria TaxID=2 RepID=A0A520XQ96_9ACTN)

HSP 1 Score: 270 bits (689), Expect = 4.180e-86
Identity = 145/298 (48.66%), Postives = 204/298 (68.46%), Query Frame = 0
Query:    8 TIMIAMLFLGVSLVLCFVAIRGAVLENRRVERRLAGPARLDGEVDDGADAPSREKSNFLSQLGSQLTLPDEKEITRLRYKLVQAGYFDRSAVKSFLAARVICLFGPVAICLSLWGLLAAKFGTTPTIVICVIFLIIGLFGPEQVLRKKAGKRTDQCRRGFPDMMDLMTACVEAGLAMDAALVRVGHELGGRYPALKQNLDIMNLELRAGRERNEAMLNFAGRINLDEAKALAIMLKQAEEMGSSVGKALRTFSDDMRNKRMMRAEEKAAALSAKLTVPLIMFIFPTIMVMLMLPAGIR 305
            T+++ +  L ++  +  V+IRG + +++ + RRLAG   L G+     +   + + N ++  G  L+LPD KEITR+R+ L QAG++   +V  F A RV+ L  P  I ++ W   A +      ++I  + ++ G+FGP   ++ +  KR    R GFPDM+DL+ +CVEAGL +DAAL+ V  E+G RYP LK NLD++NLEL AGR R+EA+ NFA R+ L+E KALA+MLKQAEEMGS +GKALR FSD+MR KRM+ AEE+A ALSAKLTVPL++FIFPTIM MLMLPA ++
Sbjct:   10 TLLMVIFCLAMTFGILMVSIRGILSKHQVMNRRLAG---LPGKP---LEIKRKSRKNLIALFGQHLSLPDAKEITRMRFVLSQAGFYTAQSVPIFYAVRVLSLILPQFILIATWWFYAKRLEPQNIVLIGSVLILAGMFGPSLFVQSRVKKRRQNAREGFPDMVDLLVSCVEAGLGLDAALMNVSKEIGDRYPVLKVNLDLLNLELMAGRSRHEALKNFADRLGLEETKALAVMLKQAEEMGSPIGKALRIFSDEMRTKRMLLAEERALALSAKLTVPLVVFIFPTIMGMLMLPAAVK 301          
BLAST of mRNA_P-canaliculata_contig94348.23456.1 vs. uniprot
Match: A0A2G2MW61_9PROT (Pilus assembly protein n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2MW61_9PROT)

HSP 1 Score: 268 bits (686), Expect = 1.390e-85
Identity = 156/297 (52.53%), Postives = 198/297 (66.67%), Query Frame = 0
Query:   14 LFLGVSLVLCFVAIRGAVLENRRVERRLAGPARLDGEVDDGADAPSREKS-----NFLSQLGSQLTLPDEKEITRLRYKLVQAGYFDRSAVKSFLAARVICLFGPVAICLSLWGLLAAKFGTTPTIVICVIFLIIGLFGPEQVLRKKAGKRTDQCRRGFPDMMDLMTACVEAGLAMDAALVRVGHELGGRYPALKQNLDIMNLELRAGRERNEAMLNFAGRINLDEAKALAIMLKQAEEMGSSVGKALRTFSDDMRNKRMMRAEEKAAALSAKLTVPLIMFIFPTIMVMLMLPAGIR 305
            LFL +SL    VAIR A+  N+ + RRLAG  +       GA    R KS     N +++ G  LTLPD +EI+R+R+KL QAG++   ++  F A R+I L  P  + L  W L A    T   I   +  +  GLF P   LR    KR  Q R GFPDMMDL+ AC+EAGL +DAAL  V  ELG R+P ++ NLD++NLEL AGR R+EA  NFA R+ L+EA AL IMLKQ+EEMGSS+GKALRTFS++MR+KRM+RAEEKA +L AK+TVPLI+FIFPTI++ML LPAG R
Sbjct:   16 LFLVISLTGAAVAIRSALSHNKTMSRRLAGIPKA------GAVKTRRSKSRAATPNMIAKFGQHLTLPDPEEISRIRFKLSQAGFYTVKSIPVFYAIRLISLLLPQFVLLIYWSLFAHDLPTKTLIYWSIGLISAGLFAPSLYLRHCINKRKLQARDGFPDMMDLLLACIEAGLGLDAALNNVSKELGKRFPVIQINLDLLNLELMAGRTRSEAFKNFAERLGLEEASALNIMLKQSEEMGSSLGKALRTFSEEMRSKRMLRAEEKAMSLPAKMTVPLILFIFPTILLMLFLPAGAR 306          
BLAST of mRNA_P-canaliculata_contig94348.23456.1 vs. uniprot
Match: A0A2G2QST4_9PROT (Pilus assembly protein n=3 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2QST4_9PROT)

HSP 1 Score: 264 bits (675), Expect = 5.990e-84
Identity = 147/298 (49.33%), Postives = 198/298 (66.44%), Query Frame = 0
Query:   11 IAMLFLGVSLVLCFVAIRGAVLENRRVERRLAGPARLDGEVDDGADAPSREKSN--FLSQLGSQLTLPDEKEITRLRYKLVQAGYFDRSAVKSFLAARVICLFGPVAICLSLWGLLAAKFGTTPTIVICVIFLIIGLFGPEQVLRKKAGKRTDQCRRGFPDMMDLMTACVEAGLAMDAALVRVGHELGGRYPALKQNLDIMNLELRAGRERNEAMLNFAGRINLDEAKALAIMLKQAEEMGSSVGKALRTFSDDMRNKRMMRAEEKAAALSAKLTVPLIMFIFPTIMVMLMLPAGIRV 306
            I  +F+ +SL    V IR ++ +N+ + RRLAGP     ++     AP    +    ++ LG  LTLP  +EI+R+R+KL QAG++   ++  F   R+  L  PV   L+ W L A        ++I +  +  GLF P+  LR++  KR  Q R GFPDMMDL+ AC+EAGL +DAAL  V  ELG R+P ++ NLD++NLEL AGR R EA  NFA R+ LDEAK+L IMLKQ+EEMGSS+GKALRTFS++MR KRM+RAEEKA AL AK+T+PLI+FIFPTI+ M+ LPA  R+
Sbjct:   13 ITAIFMALSLXGIAVVIRASLRKNQVMSRRLAGPXAKKXQI-----APKSRVTTPKMIANLGQHLTLPGPEEISRIRFKLSQAGFYXXKSIPXFYGIRLXSLLLPVFGFLAYWALYAPNLPPEKLVLIAITLIAXGLFAPDFYLRQRINKRKLQARDGFPDMMDLLIACIEAGLGLDAALSNVAKELGKRFPVIQINLDLLNLELMAGRTRPEAFKNFAERLGLDEAKSLNIMLKQSEEMGSSLGKALRTFSEEMRTKRMLRAEEKAMALPAKMTIPLILFIFPTILTMMFLPAAARI 305          
BLAST of mRNA_P-canaliculata_contig94348.23456.1 vs. uniprot
Match: A0A2G2J0L1_9PROT (Pilus assembly protein n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2J0L1_9PROT)

HSP 1 Score: 258 bits (660), Expect = 6.630e-82
Identity = 143/290 (49.31%), Postives = 189/290 (65.17%), Query Frame = 0
Query:   19 SLVLCFVAIRGAVLENRRVERRLAGPARLDGEVDDGA-DAPSREKSNFLSQLGSQLTLPDEKEITRLRYKLVQAGYFDRSAVKSFLAARVICLFGPVAICLSLWGLLAAKFGTTPTIVICVIFLIIGLFGPEQVLRKKAGKRTDQCRRGFPDMMDLMTACVEAGLAMDAALVRVGHELGGRYPALKQNLDIMNLELRAGRERNEAMLNFAGRINLDEAKALAIMLKQAEEMGSSVGKALRTFSDDMRNKRMMRAEEKAAALSAKLTVPLIMFIFPTIMVMLMLPAGIRVM 307
            SL +  +  R  +++N  + RRLAG +    +V  GA  +        + + G  + LPD  EITR+R+KL QAG++D  AV  +   RV  L  P  + L  W +      T   ++I    +  G+FGP+ VL  K   R    R GFPD++DL+ +C+EAGL +DAAL  V  ELG R+P LK NLD++NLEL AGR+R EA  NFA R+ L+EAKAL IMLKQ+EEMGSS+G ALRTFS++MR+KRM+ AEEKA AL AK+TVPLI+FIFPTIM ML+LPA  R+M
Sbjct:    2 SLSMIVIISRRVLMQNHTLTRRLAGVSGPQKDVQKGAAKSGGLVSKKLIERFGKHIALPDVNEITRIRFKLAQAGFYDAQAVTIYCGVRVFALLVPQLVLLCAWPIFLQDMETKTLLMISFGLIGAGMFGPDYVLGSKIATRQQLARDGFPDLLDLLISCLEAGLGLDAALSNVAEELGTRFPVLKINLDLLNLELMAGRQRYEAFKNFAERLGLEEAKALTIMLKQSEEMGSSLGLALRTFSEEMRSKRMLLAEEKAMALPAKMTVPLILFIFPTIMTMLLLPAAARLM 291          
BLAST of mRNA_P-canaliculata_contig94348.23456.1 vs. uniprot
Match: A0A7C5QV65_9PROT (Type II secretion system F family protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=A0A7C5QV65_9PROT)

HSP 1 Score: 257 bits (657), Expect = 3.130e-81
Identity = 146/310 (47.10%), Postives = 200/310 (64.52%), Query Frame = 0
Query:    1 MNFDNALTIMIAMLFLGVSL----VLCFVAIRGAVLENRRVERRLAG-PARLDGEVDDGADAPSREKSNFLSQLGSQLTLPDEKEITRLRYKLVQAGYFDRSAVKSFLAARVICLFGPVAICLSLWGLLAAKFGTTPTIVICVIFLIIGLFGPEQVLRKKAGKRTDQCRRGFPDMMDLMTACVEAGLAMDAALVRVGHELGGRYPALKQNLDIMNLELRAGRERNEAMLNFAGRINLDEAKALAIMLKQAEEMGSSVGKALRTFSDDMRNKRMMRAEEKAAALSAKLTVPLIMFIFPTIMVMLMLPAGIR 305
            M    + T+ + +LFL +S     +L FV +R A    R   RRLAG P  + G        P++   N ++ +G  LTLPD KEI+++R+ L QAG++   +V  F A R+  +  P  I L     + + F     + I ++ +++G+F P   +R +   R    R GFPD +DL+ +C+EAGL +DAAL  V  ELG RYP LK NLD++NLEL AGR R+EA  NFA R+ L+EA+AL +MLKQ+EEMGSS+G ALRTFSD++R+KRM+ AEEKA ALSAKLTVPLI+FIFPT+M ML+LPA  R
Sbjct:    1 MTLTPSATLALVILFLAMSFGAIAILAFVNLRQA----RITSRRLAGMPGSVSGRAPTKKIKPAK---NLVALIGKHLTLPDAKEISKIRFSLSQAGFYSAKSVPVFYAVRLAAILVPQFILLGSAAFIGSDFSPNLLLKISILLIVVGMFAPGYFIRSRTNNRMLSAREGFPDFLDLLLSCIEAGLGLDAALNTVAKELGQRYPVLKINLDLLNLELMAGRRRHEAFKNFAERLGLEEARALTVMLKQSEEMGSSLGNALRTFSDELRSKRMLLAEEKAMALSAKLTVPLILFIFPTLMAMLLLPAAAR 303          
BLAST of mRNA_P-canaliculata_contig94348.23456.1 vs. uniprot
Match: A0A399RMX1_9PROT (Type II secretion system F family protein n=2 Tax=Henriciella mobilis TaxID=2305467 RepID=A0A399RMX1_9PROT)

HSP 1 Score: 235 bits (599), Expect = 1.900e-72
Identity = 135/309 (43.69%), Postives = 195/309 (63.11%), Query Frame = 0
Query:    4 DNALTIMIAMLFLGVSLVLCFVAIRGAVLENRRVERRLAGPARLDGEVDDGADA-----PSREKSNFLSQLGSQLTLPDEKEITRLRYKLVQAGYFDRSAVKSFLAARVICLFGPVAICLSLWGLLAAKFGTTPTIVICVIFLIIGLFGPEQVLRKKAGKRTDQCRRGFPDMMDLMTACVEAGLAMDAALVRVGHELGGRYPALKQNLDIMNLELRAGRERNEAMLNFAGRINLDEAKALAIMLKQAEEMGSSVGKALRTFSDDMRNKRMMRAEEKAAALSAKLTVPLIMFIFPTIMVMLMLPAGIRVM 307
            D    I I M+ +G ++++    +  +V + R+V  RL        + DDG  +       R K + + ++G + T P+  ++T+LR++L++AGY+ +SA   ++  R + L  P  I L+ W L+         ++  V   II    P  +L KK   R +Q R GFPDMMDL+ ACVEAGL++D A+ RV  EL  RYP L  +L IMNLE+RAGR R EA  NFA R+ LDEA+ALA ML+Q+EE+G+SVG+ LR F+ DMR KRM+ AEEKA AL AKL VPLI+F+FP+++V+L+LPA +R+M
Sbjct:    7 DQITAITIIMIVMGAAMLVLGSKVFRSVRDRRQVSDRL--------KTDDGRPSRVSAYSERPKVSLVEKIGRRFTDPNSADLTKLRFRLMKAGYYGKSAPHIYIGVRFVALILPQFILLACWPLVDQYMPQHGLLLSSVALGIIAFISPSFILDKKVASREEQYRNGFPDMMDLLVACVEAGLSLDGAVQRVSDELVQRYPNLADHLKIMNLEMRAGRARTEAWKNFADRLGLDEARALATMLRQSEELGTSVGETLRVFASDMREKRMLYAEEKALALPAKLVVPLILFVFPSLLVVLILPAVVRMM 307          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig94348.23456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0016799C9F1.610e-16478.71type II secretion system F family protein n=1 Tax=... [more]
UPI00040C2D684.030e-10958.36type II secretion system F family protein n=1 Tax=... [more]
A0A848V8W6_9PROT5.950e-9951.48Type II secretion system F family protein n=1 Tax=... [more]
UPI0003A877B85.800e-9353.20type II secretion system F family protein n=1 Tax=... [more]
A0A520XQ96_9ACTN4.180e-8648.66Type II secretion system F family protein n=2 Tax=... [more]
A0A2G2MW61_9PROT1.390e-8552.53Pilus assembly protein n=1 Tax=Robiginitomaculum s... [more]
A0A2G2QST4_9PROT5.990e-8449.33Pilus assembly protein n=3 Tax=Robiginitomaculum s... [more]
A0A2G2J0L1_9PROT6.630e-8249.31Pilus assembly protein n=1 Tax=Robiginitomaculum s... [more]
A0A7C5QV65_9PROT3.130e-8147.10Type II secretion system F family protein n=1 Tax=... [more]
A0A399RMX1_9PROT1.900e-7243.69Type II secretion system F family protein n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018076Type II secretion system F domainPFAMPF00482T2SSFcoord: 171..299
e-value: 5.6E-19
score: 68.3
NoneNo IPR availablePANTHERPTHR35007:SF2coord: 9..308
NoneNo IPR availablePANTHERPTHR35007FAMILY NOT NAMEDcoord: 9..308
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 301..311
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 149..274
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 275..300
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 125..129
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availableTMHMMTMhelixcoord: 128..147
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 277..299
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig94348contigP-canaliculata_contig94348:3..938 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig94348.23456.1mRNA_P-canaliculata_contig94348.23456.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig94348 3..938 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig94348.23456.1 ID=prot_P-canaliculata_contig94348.23456.1|Name=mRNA_P-canaliculata_contig94348.23456.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=312bp
MNFDNALTIMIAMLFLGVSLVLCFVAIRGAVLENRRVERRLAGPARLDGE
VDDGADAPSREKSNFLSQLGSQLTLPDEKEITRLRYKLVQAGYFDRSAVK
SFLAARVICLFGPVAICLSLWGLLAAKFGTTPTIVICVIFLIIGLFGPEQ
VLRKKAGKRTDQCRRGFPDMMDLMTACVEAGLAMDAALVRVGHELGGRYP
ALKQNLDIMNLELRAGRERNEAMLNFAGRINLDEAKALAIMLKQAEEMGS
SVGKALRTFSDDMRNKRMMRAEEKAAALSAKLTVPLIMFIFPTIMVMLML
PAGIRVMTGLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018076T2SS_F