prot_P-canaliculata_contig9432.23454.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig9432.23454.1
Unique Name	prot_P-canaliculata_contig9432.23454.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	391

Homology

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BLAST of mRNA_P-canaliculata_contig9432.23454.1 vs. uniprot
Match: A0A6H5K9C6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9C6_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 2.430e-33
Identity = 78/173 (45.09%), Postives = 111/173 (64.16%), Query Frame = 0

Query:  220 AEASRRIGVIPRN--PFFLSDKGIMESGRSEERRCHSESGTLTGLENTSRKVVILIVDDSTISFKLATRKLRALGYSTLLAENGKAALETLRQRRNQVDLVLLDIVMPVMDGVEFLNIVKNDPDLQHTPVVIVSSVNREQLGRACMEAGALAVLHKPFKAHELQDLIVREGIA 390
            AE    +G  P         D+G+  SG    R   S S TL      +  + +L+V+DS IS KLA +KLRALG ST+  ENG+AAL+ +R   +++ LVL D++MPVMDG+E L +VK+DP L+  PVV+VSS+ R +L   C+E+GALAVL KPF+A E+Q++  + G+A
Sbjct:  213 AETKGPLGSAPTGGXXXXXXDRGL--SGSPSRRE--SASSTLP-----TANMTVLVVEDSVISSKLAIQKLRALGCSTISVENGRAALDLMRGDPDRISLVLADVIMPVMDGIELLRVVKDDPILRKIPVVVVSSLERRELEALCLESGALAVLRKPFRALEIQEIAAQAGLA 376

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BLAST of mRNA_P-canaliculata_contig9432.23454.1 vs. uniprot
Match: A0A7S3URR6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URR6_HETAK)

HSP 1 Score: 121 bits (304), Expect = 9.500e-30
Identity = 70/141 (49.65%), Postives = 90/141 (63.83%), Query Frame = 0

Query:  244 SGRSEERRCHSESGTLTGLENTSRKVVILIVDDSTISFKLATRKLRALGYSTLLAENGKAALETLRQRRNQVDLVLLDIVMPVMDGVEFLNIVKNDPDLQHTPVVIVSSVNREQLGRACMEAGALAVLHKPFKAHELQDLI 384
            +G   E R   E  T+      S K+ +LIVDDS IS KLA RKL +LGY T+ AENGK AL+ LR+     DLVLLDIVMPVMDGVE L  +K D  L+  PV ++S +  E L + C+E+GA AVL KP    E+Q+++
Sbjct:    5 AGAGGEGRPAGERETI----RNSDKLSVLIVDDSNISSKLALRKLVSLGYDTMHAENGKVALQLLRRFPGDFDLVLLDIVMPVMDGVELLTTMKADALLRAVPVAMLSGLEDEALAKVCLESGAEAVLRKPVNTDEVQEIL 141

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BLAST of mRNA_P-canaliculata_contig9432.23454.1 vs. uniprot
Match: D8LNV9_ECTSI (Response receiver n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV9_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 5.630e-23
Identity = 67/160 (41.88%), Postives = 91/160 (56.88%), Query Frame = 0

Query:  205 GFWANNPTDQSPGLGAEASRRIGVIPRNPFFLSDKGIMESGRSEERRCHSESGTLTGLENTSRKVVILIVDDSTISFKLATRKLRALGYSTLLAENGKAALETLRQRRNQVDLVLLDIVMPVMDGVEFLNIVKNDPDLQHTPVVIVSSVNREQL--GRAC 362
            GF    P        AE    +G          D+G+ ES    E    S S TL      +  + +L+V+DS IS KLA RKLRALG ST+  ENG+AAL+ +R   +++ LVL D++MPVMDG+E L IVK+DP L+  P+V+VSS+ R +L  G  C
Sbjct:  205 GFAPGVPPPPEEPYPAETKVALGSARTEGGGGGDRGLSESPSRRE----SASSTLP-----TANMAVLVVEDSVISSKLAIRKLRALGCSTISVENGRAALDLMRGDPDRISLVLADVIMPVMDGIELLRIVKDDPILRKIPIVVVSSLERRELVGGAGC 355

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BLAST of mRNA_P-canaliculata_contig9432.23454.1 vs. uniprot
Match: A0A7S3URM2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URM2_HETAK)

HSP 1 Score: 106 bits (264), Expect = 2.150e-21
Identity = 67/179 (37.43%), Postives = 95/179 (53.07%), Query Frame = 0

Query:  209 NNPTDQSPGLGAE---ASRRIGVIPRNPFFLSDKGIMESGRSEERRCHSESGTLTGLENTSRKVVILIVDDSTISFKLATRKLRALGYSTLLAENGKAALETLRQRRNQVDLVLLDIVMPVMDGVEFLNIVKNDPDLQHTPVVIVSSVNREQLGRACMEAGALAVLHKPFKAHELQDLI 384
            N PT Q  G+G     +  +  V P  P     K    +   ++ R  S S      E   RK  IL+VDDS IS K+A R+L  LGY    A +G+ ALE +    ++ DL+LLDIVMP +DG+E L+ VK    LQH P+ ++S +  + L   C++ GAL VL KP K   +Q ++
Sbjct:  128 NGPTAQQNGVGGTVRLSPMKRPVQPTQPAVEVPKSGRANKNQQKSRTRSNSHNSGQQE---RKFCILVVDDSHISCKIAVRQLGKLGYEVDTAFSGEEALEKVGATPHRYDLMLLDIVMPGLDGIEVLSKVKGTAHLQHLPICMLSGLEDQTLAEVCLQQGALEVLLKPLKVDAVQRVV 303

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BLAST of mRNA_P-canaliculata_contig9432.23454.1 vs. uniprot
Match: A0A0P9EYV0_9CHLR (Response regulatory domain-containing protein (Fragment) n=1 Tax=Kouleothrix aurantiaca TaxID=186479 RepID=A0A0P9EYV0_9CHLR)

HSP 1 Score: 94.0 bits (232), Expect = 9.010e-20
Identity = 48/105 (45.71%), Postives = 69/105 (65.71%), Query Frame = 0

Query:  271 ILIVDDSTISFKLATRKLRALGYSTLLAENGKAALETLRQRRNQVDLVLLDIVMPVMDGVEFLNIVKNDPDLQHTPVVIVSSVNREQLGRACMEAGALAVLHKPF 375
            +LIVDD+ ++ KL  R L  LG+ T  A +G+AALE LR   +  DLVLLD++MP +DG E L  +K+DP L+  PV+++++V+       C+E GA   LHKPF
Sbjct:    4 VLIVDDNLVNRKLLARALADLGHRTSAAADGEAALELLRAEPDTFDLVLLDVLMPRLDGYEVLAAIKSDPALRELPVIMITAVDELDSAIRCIELGATDYLHKPF 108

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BLAST of mRNA_P-canaliculata_contig9432.23454.1 vs. uniprot
Match: A0A835ZHY4_9STRA (CheY-like superfamily protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY4_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 6.620e-18
Identity = 67/205 (32.68%), Postives = 107/205 (52.20%), Query Frame = 0

Query:  178 LSVDENGNPV-LPAVVDLPELMISLEARGFWANNPTDQSPGLGAEASRRIGVIPRNPFFLSDKGIMESGRSEE-RRCHSESGTLTGLENTSRKVVILIVDDSTISFKLATRKLRALGYSTLLAENGKAALETLRQRRNQVDLVLLDIVMPVMDGVEFLNIVKNDPDLQHTPVVIVSSVNREQLGRACMEAGALAVLHKPFKAHEL 380
            +SVD + N   L AV+   E    L+ +        +    L  E    + V+ R P  L    ++ +  S++ +R H   G         R+V +L+VDDS IS KLA+R L ++     +A +G+AAL  L++     D VLLDIVMP +DG+E L+ ++++P L   PV ++S +  + L   C+  GA+ VL KP KA ++
Sbjct:    5 ISVDVDANAAALRAVLQRYE---DLKKQDLAIRTDRELYNELLPELQAALEVVIRGPSSL----LLPASLSQQGQRLHPLDG---------RQVSVLVVDDSHISCKLASRALESINLVPKVAYSGEAALMLLKRDPAAFDFVLLDIVMPGLDGIEVLSRIRHNPALARLPVAMLSGLEDKTLAEVCLHQGAVQVLIKPVKAEDV 193

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BLAST of mRNA_P-canaliculata_contig9432.23454.1 vs. uniprot
Match: A0A835ZEX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEX5_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.010e-17
Identity = 51/86 (59.30%), Postives = 66/86 (76.74%), Query Frame = 0

Query:  268 KVVILIVDDSTISFKLATRKLRALGYSTLLAENGKAALETLRQRRNQVDLVLLDIVMPVMDGVEFLNIVKNDPDLQHTPVVIVSSV 353
            ++ IL+VDDS IS KLA RKL +LG+ T+ A+NG  ALE LR  + +VDLVLLDIVMPVMDGVE L I++ D  L+H PVV++S +
Sbjct:   99 RITILVVDDSNISSKLAVRKLASLGHRTVHADNGLNALEMLRSGQ-EVDLVLLDIVMPVMDGVELLTILQADEALRHIPVVMLSGL 183

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BLAST of mRNA_P-canaliculata_contig9432.23454.1 vs. uniprot
Match: A0A2W7B729_9CYAN (Diguanylate cyclase response regulator n=1 Tax=Snowella sp. TaxID=2164131 RepID=A0A2W7B729_9CYAN)

HSP 1 Score: 90.9 bits (224), Expect = 7.630e-17
Identity = 44/114 (38.60%), Postives = 73/114 (64.04%), Query Frame = 0

Query:  267 RKVVILIVDDSTISFKLATRKLRALGYSTLLAENGKAALETLRQRRNQVDLVLLDIVMPVMDGVEFLNIVKNDPDLQHTPVVIVSSVNREQLGRACMEAGALAVLHKPFKAHEL 380
            ++ +ILIVDD   + +L  + L  +GY+T+ A +G+ ALE +  R  Q+DL+LLD++MP MDG+E  NI+K++P  Q  P++ V++ +  +      + GA+  + KPFK  EL
Sbjct:    7 KECLILIVDDVIDNIRLLDKILDGIGYNTVFANSGREALEIIENRSTQIDLILLDLMMPEMDGIEVCNILKSNPMHQEIPIIFVTADDSAESFATAFKMGAIDYIKKPFKKAEL 120

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BLAST of mRNA_P-canaliculata_contig9432.23454.1 vs. uniprot
Match: A0A550JXF3_9PROT (Response regulator n=1 Tax=Glycocaulis profundi TaxID=2518983 RepID=A0A550JXF3_9PROT)

HSP 1 Score: 85.9 bits (211), Expect = 1.000e-16
Identity = 49/116 (42.24%), Postives = 70/116 (60.34%), Query Frame = 0

Query:  271 ILIVDDSTISFKLATRKLRALGYSTLLAENGKAALETLRQRRNQVDLVLLDIVMPVMDGVEFLNIVKNDPDLQHTPVVIVSSVNREQLGRACMEAGALAVLHKPFKAHELQDLIVR 386
            IL+ DD  +   L T +L A GY+   A +G AA++ +R++R   DL++LD +MPVMDG E L  +K DPDL  TPVV+++++ +E      +E GA   L KPF   EL   I R
Sbjct:    6 ILVADDDALLVGLLTHRLSAKGYAVSSAGDGAAAIDAVREQRP--DLIVLDAMMPVMDGFEALRRIKGDPDLSETPVVMLTALKQEADVVGALELGAEDYLIKPFMPEELLSRIGR 119

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BLAST of mRNA_P-canaliculata_contig9432.23454.1 vs. uniprot
Match: UPI0019EE9B85 (Response regulator n=1 Tax=Synechococcales cyanobacterium M55_K2018_004 TaxID=2774347 RepID=UPI0019EE9B85)

HSP 1 Score: 90.9 bits (224), Expect = 1.210e-16
Identity = 48/105 (45.71%), Postives = 74/105 (70.48%), Query Frame = 0

Query:  271 ILIVDDSTISFKLATRKLRALGYSTLLAENGKAALETLRQRRNQVDLVLLDIVMPVMDGVEFLNIVKNDPDLQHTPVVIVSSVNREQLGRACMEAGALAVLHKPF 375
            +L+VDD+ ++  L +R+L+  G++ ++AE+GKAALE LR   +  DLVLLDI+MP M+G + L I+K DPDL+H PV+++S+++       C+E GA   L KPF
Sbjct:    8 LLVVDDNEMNRDLLSRRLQRQGHTIVMAEHGKAALEKLRS--HAFDLVLLDIMMPEMNGYQVLEILKADPDLRHIPVIMISALDDIDSVVRCIELGAEDYLFKPF 110

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig9432.23454.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig9432.23454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K9C6_9PHAE	2.430e-33	45.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S3URR6_HETAK	9.500e-30	49.65	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
D8LNV9_ECTSI	5.630e-23	41.88	Response receiver n=1 Tax=Ectocarpus siliculosus T...	[more]
A0A7S3URM2_HETAK	2.150e-21	37.43	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A0P9EYV0_9CHLR	9.010e-20	45.71	Response regulatory domain-containing protein (Fra...	[more]
A0A835ZHY4_9STRA	6.620e-18	32.68	CheY-like superfamily protein n=1 Tax=Tribonema mi...	[more]
A0A835ZEX5_9STRA	1.010e-17	59.30	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A2W7B729_9CYAN	7.630e-17	38.60	Diguanylate cyclase response regulator n=1 Tax=Sno...	[more]
A0A550JXF3_9PROT	1.000e-16	42.24	Response regulator n=1 Tax=Glycocaulis profundi Ta...	[more]
UPI0019EE9B85	1.210e-16	45.71	Response regulator n=1 Tax=Synechococcales cyanoba...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 269..384 e-value: 5.3E-28 score: 109.0
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 271..383 e-value: 2.6E-23 score: 82.3
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 270..388 score: 36.425
None	No IPR available	GENE3D	3.40.50.12740		coord: 269..388 e-value: 2.2E-33 score: 118.1
None	No IPR available	PANTHER	PTHR44591	FAMILY NOT NAMED	coord: 268..384
None	No IPR available	PANTHER	PTHR44591:SF3		coord: 268..384
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 269..386
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 82..187

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig9432	contig	P-canaliculata_contig9432:4135..9905 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig9432.23454.1	mRNA_P-canaliculata_contig9432.23454.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig9432 4117..10259 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig9432.23454.1 ID=prot_P-canaliculata_contig9432.23454.1|Name=mRNA_P-canaliculata_contig9432.23454.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=391bp
MPGQEAPSFNLLDSRKKLFRLDEFLARSPDRKLLLAFFPAAFTEAFSDEE
SLETGSVRFARPTSSGEESPIGAVPGTESVLSVLMANIAAIKATDTAVVG
ICKDLPHTLSALSTEKGLDFPVLSDPSLAASEQFVGTFDLGMFPSAFGFR
SPSPTIHRGAHTGIVVLDGRRKCLYRWLSVDENGNPVLPAVVDLPELMIS
LEARGFWANNPTDQSPGLGAEASRRIGVIPRNPFFLSDKGIMESGRSEER
RCHSESGTLTGLENTSRKVVILIVDDSTISFKLATRKLRALGYSTLLAEN
GKAALETLRQRRNQVDLVLLDIVMPVMDGVEFLNIVKNDPDLQHTPVVIV
SSVNREQLGRACMEAGALAVLHKPFKAHELQDLIVREGIA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR011006	CheY-like_superfamily
IPR036249	Thioredoxin-like_sf