prot_P-canaliculata_contig943.23452.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig943.23452.1
Unique Nameprot_P-canaliculata_contig943.23452.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length135
Homology
BLAST of mRNA_P-canaliculata_contig943.23452.1 vs. uniprot
Match: D7FI71_ECTSI (Ribosomal_L14e domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI71_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 1.520e-66
Identity = 108/133 (81.20%), Postives = 119/133 (89.47%), Query Frame = 0
Query:    2 GFKRFVEIGRVVLISYGPHEGKLAVIIDVVDNNKALIDGPDTEVPRQMIPFKRLALTDFTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKEKSKIIAEKVKELKAAS 134
            GF RFVEIGRVVL++YGP EGKLAVI+DV DNNKALI+GPDT VPRQ+IPFKRLALTDF LPIQRNAR GTI  AAK  DL AKWEASSWAKKKA+K KRA+MTDFDRFKVMVARK+KS IIA+KV EL+AA+
Sbjct:    2 GFTRFVEIGRVVLVNYGPDEGKLAVILDVADNNKALIEGPDTGVPRQLIPFKRLALTDFKLPIQRNARIGTIKAAAKEADLYAKWEASSWAKKKAKKVKRAQMTDFDRFKVMVARKQKSAIIAKKVAELQAAA 134          
BLAST of mRNA_P-canaliculata_contig943.23452.1 vs. uniprot
Match: A0A7S0F6W3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F6W3_9STRA)

HSP 1 Score: 160 bits (405), Expect = 2.840e-48
Identity = 86/132 (65.15%), Postives = 107/132 (81.06%), Query Frame = 0
Query:    3 FKRFVEIGRVVLISYGPHEGKLAVIIDVVDNNKALIDGPD--TEVPRQMIPFKRLALTDFTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKEKSKIIAEKVKELKA 132
            FKR+VE+GRVVLI+YGP EGKLA IID+VD NK LIDGP   T  PRQ+I F R+ALTD T+ IQRNAR  ++ KA +  + M+KW+ASSWAKK A + KRA ++DFDRFKVMVARK+K++IIA+KV EL+A
Sbjct:    3 FKRYVEVGRVVLINYGPDEGKLATIIDIVDQNKCLIDGPMEITGAPRQVISFTRIALTDLTVKIQRNARQKSLKKAWEEGETMSKWDASSWAKKLAARKKRASLSDFDRFKVMVARKQKNEIIAKKVAELEA 134          
BLAST of mRNA_P-canaliculata_contig943.23452.1 vs. uniprot
Match: B8BUA7_THAPS (RL14, ribosomal protein 14 60S large ribosomal subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUA7_THAPS)

HSP 1 Score: 160 bits (404), Expect = 4.040e-48
Identity = 84/133 (63.16%), Postives = 106/133 (79.70%), Query Frame = 0
Query:    2 GFKRFVEIGRVVLISYGPHEGKLAVIIDVVDNNKALIDGPD--TEVPRQMIPFKRLALTDFTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKEKSKIIAEKVKELKA 132
            GF R+VE+GRVVLI+YGP  GKLA +IDVVD NK L+ GP+  T V RQ+IP++R+ALTD T+ IQR+ARA  +  A    D +AKWE SSWAKK   K+KRA ++DFDRFKVMVA+K+KS+IIA+K+KELKA
Sbjct:    2 GFSRYVEVGRVVLITYGPDAGKLATVIDVVDQNKCLVQGPEEITGVKRQVIPYRRIALTDLTVKIQRSARAKQLKAAWAEGDTLAKWEGSSWAKKLDGKSKRAALSDFDRFKVMVAKKQKSRIIAQKIKELKA 134          
BLAST of mRNA_P-canaliculata_contig943.23452.1 vs. uniprot
Match: A0A7S2SNQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNQ8_9STRA)

HSP 1 Score: 160 bits (404), Expect = 7.080e-48
Identity = 83/130 (63.85%), Postives = 102/130 (78.46%), Query Frame = 0
Query:    2 GFKRFVEIGRVVLISYGPHEGKLAVIIDVVDNNKALIDGPD--TEVPRQMIPFKRLALTDFTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKEKSKIIAEKVKE 129
            GF RFVE+GRVVLI+YGP  GKLA +ID+VD NK L+DGP+  T V RQ+I + R+ LTD  + IQRNARA T+  A K  D MAKWE S WAKK A K+KRA ++DFDRFKVM+A+K+KSKIIA+K+KE
Sbjct:   23 GFSRFVEVGRVVLITYGPSAGKLATVIDIVDQNKCLVDGPEEITGVSRQVISYSRIQLTDLKVNIQRNARAKTLKAALKEADTMAKWEGSEWAKKLAAKSKRASLSDFDRFKVMLAKKQKSKIIAQKIKE 152          
BLAST of mRNA_P-canaliculata_contig943.23452.1 vs. uniprot
Match: A0A6U6K629_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A6U6K629_9STRA)

HSP 1 Score: 159 bits (402), Expect = 8.130e-48
Identity = 83/132 (62.88%), Postives = 105/132 (79.55%), Query Frame = 0
Query:    3 FKRFVEIGRVVLISYGPHEGKLAVIIDVVDNNKALIDGPD--TEVPRQMIPFKRLALTDFTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKEKSKIIAEKVKELKA 132
            F R+VE+GRVVLI+YGP  GKLA +ID+VD NK LIDGP+  T V RQ+IP+KR+ALTD  + +QR+ARA T+  A K  D + KWE+SSWAKK A K KRA ++DFDRFKVMVA+K+K  I+A+KVKE+KA
Sbjct:    3 FSRYVEVGRVVLINYGPESGKLATVIDIVDQNKCLIDGPEEITGVSRQVIPYKRIALTDLKVNVQRSARAKTLKAAWKEGDTLNKWESSSWAKKLASKKKRANLSDFDRFKVMVAKKQKRYIVAKKVKEMKA 134          
BLAST of mRNA_P-canaliculata_contig943.23452.1 vs. uniprot
Match: F0YD47_AURAN (Ribosomal_L14e domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YD47_AURAN)

HSP 1 Score: 158 bits (400), Expect = 1.490e-47
Identity = 83/130 (63.85%), Postives = 104/130 (80.00%), Query Frame = 0
Query:    3 FKRFVEIGRVVLISYGPHEGKLAVIIDVVDNNKALIDGPDTE--VPRQMIPFKRLALTDFTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKEKSKIIAEKVKEL 130
            F RFVE+GRVVLI+YGP EGKLA IID+VD NK L+DGP T+  V RQ+IPFKR+ALTD  + I +NAR  T++KA    D++AKW+ASSWAKK A K KRA +TDF RF++MVARK++S I+A KVKE+
Sbjct:    1 FSRFVEVGRVVLINYGPDEGKLATIIDIVDGNKCLVDGPATKTGVARQVIPFKRVALTDIVVKIPKNARQKTLNKAWDEADVLAKWDASSWAKKLAAKKKRASLTDFQRFQLMVARKQRSAIVAAKVKEM 130          
BLAST of mRNA_P-canaliculata_contig943.23452.1 vs. uniprot
Match: A0A835YLN7_9STRA (Ribosomal protein L14-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN7_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.740e-47
Identity = 84/135 (62.22%), Postives = 106/135 (78.52%), Query Frame = 0
Query:    2 GFKRFVEIGRVVLISYGPHEGKLAVIIDVVDNNKALIDGPD--TEVPRQMIPFKRLALTDFTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKEKSKIIAEKVKELKAAS 134
            GF RFVEIGRV LI+YGP EGKL  IIDVVD+NKALIDGP+  T V RQMIPFKRLALTDF + I RNAR GT+ KA    D++AKW A++WA+K+A KAKRA + D DRFK+M+ARK+K++ +   + +LK ++
Sbjct:    2 GFTRFVEIGRVALINYGPDEGKLCTIIDVVDHNKALIDGPEELTGVKRQMIPFKRLALTDFKVKILRNARQGTLKKAFAEADVLAKWGATAWARKRAAKAKRASLGDLDRFKLMIARKQKARAVNTALAKLKKSA 136          
BLAST of mRNA_P-canaliculata_contig943.23452.1 vs. uniprot
Match: A0A7S2EK65_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EK65_TRICV)

HSP 1 Score: 159 bits (403), Expect = 3.430e-47
Identity = 85/132 (64.39%), Postives = 105/132 (79.55%), Query Frame = 0
Query:    3 FKRFVEIGRVVLISYGPHEGKLAVIIDVVDNNKALIDGPD--TEVPRQMIPFKRLALTDFTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKEKSKIIAEKVKELKA 132
            F R+VE+GRVVLI+YGP EGKLA IID+VD NK LIDGP   T V RQ+IP+KR+ALTD T+ I RNARA T+ KA    D+ AKW+ SSWAKK + K KRA ++DF RFKVMVA+K++S I+A+K+KELKA
Sbjct:   61 FTRYVEVGRVVLINYGPEEGKLATIIDIVDQNKCLIDGPADLTGVVRQVIPYKRIALTDITVKIARNARAKTLKKAWTEGDVQAKWDGSSWAKKLSSKKKRASLSDFGRFKVMVAKKKRSAIVAKKIKELKA 192          
BLAST of mRNA_P-canaliculata_contig943.23452.1 vs. uniprot
Match: A0A7S2S552_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S552_9STRA)

HSP 1 Score: 157 bits (397), Expect = 4.680e-47
Identity = 83/132 (62.88%), Postives = 105/132 (79.55%), Query Frame = 0
Query:    3 FKRFVEIGRVVLISYGPHEGKLAVIIDVVDNNKALIDGPD--TEVPRQMIPFKRLALTDFTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKEKSKIIAEKVKELKA 132
            F R+ E+GRVVLI++GP  GKLA IID+VD NK L++GP+  T V R++IPF+RL LTDFT+ I RNAR+ T+  A K  D+ AKWEA+SWAKK   KAKRA ++DF RFKVMVARK+KS II++K+KELKA
Sbjct:    3 FTRYAEVGRVVLINFGPDAGKLATIIDIVDQNKCLVEGPEDITGVSRKVIPFRRLQLTDFTVKISRNARSKTLKAAWKEADISAKWEATSWAKKLDNKAKRADLSDFGRFKVMVARKQKSAIISKKIKELKA 134          
BLAST of mRNA_P-canaliculata_contig943.23452.1 vs. uniprot
Match: A0A7S2AMT7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMT7_9STRA)

HSP 1 Score: 156 bits (395), Expect = 9.150e-47
Identity = 79/130 (60.77%), Postives = 105/130 (80.77%), Query Frame = 0
Query:    3 FKRFVEIGRVVLISYGPHEGKLAVIIDVVDNNKALIDGPD--TEVPRQMIPFKRLALTDFTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKEKSKIIAEKVKEL 130
            + RFVE+GR+VLI+YGP  GKLA I+D+VDNNK LIDGP   T V RQ+IPFKR+ALTDF + I + A   T++ A +A D++ KWE++SWAKK A K KRA ++DFDRFK+MVARK+K+KI+A+KVK++
Sbjct:    3 YTRFVEVGRIVLINYGPETGKLATIVDIVDNNKCLIDGPRKLTGVQRQIIPFKRIALTDFKVDIPKAASQKTLTAAIEAADILGKWESTSWAKKLAAKKKRANLSDFDRFKLMVARKQKAKIVADKVKQM 132          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig943.23452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI71_ECTSI1.520e-6681.20Ribosomal_L14e domain-containing protein n=2 Tax=E... [more]
A0A7S0F6W3_9STRA2.840e-4865.15Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
B8BUA7_THAPS4.040e-4863.16RL14, ribosomal protein 14 60S large ribosomal sub... [more]
A0A7S2SNQ8_9STRA7.080e-4863.85Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6U6K629_9STRA8.130e-4862.88Hypothetical protein n=2 Tax=Odontellaceae TaxID=2... [more]
F0YD47_AURAN1.490e-4763.85Ribosomal_L14e domain-containing protein (Fragment... [more]
A0A835YLN7_9STRA1.740e-4762.22Ribosomal protein L14-domain-containing protein n=... [more]
A0A7S2EK65_TRICV3.430e-4764.39Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2S552_9STRA4.680e-4762.88Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2AMT7_9STRA9.150e-4760.77Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002784Ribosomal protein L14e domainPFAMPF01929Ribosomal_L14ecoord: 46..119
e-value: 2.2E-29
score: 101.8
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 2..86
e-value: 6.0E-35
score: 121.3
NoneNo IPR availablePANTHERPTHR11127:SF260S RIBOSOMAL PROTEIN L14coord: 3..133
IPR039660Ribosomal protein L14PANTHERPTHR1112760S RIBOSOMAL PROTEIN L14coord: 3..133
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 5..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig943contigP-canaliculata_contig943:6335..9884 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig943.23452.1mRNA_P-canaliculata_contig943.23452.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig943 6335..9884 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig943.23452.1 ID=prot_P-canaliculata_contig943.23452.1|Name=mRNA_P-canaliculata_contig943.23452.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=135bp
QGFKRFVEIGRVVLISYGPHEGKLAVIIDVVDNNKALIDGPDTEVPRQMI
PFKRLALTDFTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAK
RARMTDFDRFKVMVARKEKSKIIAEKVKELKAAS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002784Ribosomal_L14e_dom
IPR014722Rib_L2_dom2
IPR039660Ribosomal_protein_L14
IPR008991Translation_prot_SH3-like_sf